RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RAPGEF2Q9Y4G8 1499 aa37.35■■■■□ 3.57
SNX3-202ENST00000349379 CYB5RLQ6IPT4 315 aa37.33■■■■□ 3.57
SNX3-202ENST00000349379 CHIC1Q5VXU3 224 aa37.3■■■■□ 3.56
SNX3-202ENST00000349379 JPH4Q96JJ6 628 aa37.27■■■■□ 3.56
SNX3-202ENST00000349379 PRXQ9BXM0 1461 aa37.26■■■■□ 3.56
SNX3-202ENST00000349379 PRG4Q92954 1404 aaPredicted RBP37.23■■■■□ 3.55
SNX3-202ENST00000349379 EEA1Q15075 1411 aa37.21■■■■□ 3.55
SNX3-202ENST00000349379 IQGAP2Q13576 1575 aa37.18■■■■□ 3.54
SNX3-202ENST00000349379 CTTNBP2Q8WZ74 1663 aa37.14■■■■□ 3.54
SNX3-202ENST00000349379 CSRNP3Q8WYN3 585 aa37.1■■■■□ 3.53
SNX3-202ENST00000349379 UGGT2Q9NYU1 1516 aa37■■■■□ 3.51
SNX3-202ENST00000349379 DISP1Q96F81 1524 aa36.92■■■■□ 3.5
SNX3-202ENST00000349379 KIF21BO75037 1637 aa36.91■■■■□ 3.5
SNX3-202ENST00000349379 CARMIL2Q6F5E8 1435 aa36.91■■■■□ 3.5
SNX3-202ENST00000349379 FAM9AQ8IZU1 332 aaPredicted RBP36.87■■■■□ 3.49
SNX3-202ENST00000349379 KIAA0556O60303 1618 aa36.85■■■■□ 3.49
SNX3-202ENST00000349379 TNIKQ9UKE5 1360 aa36.81■■■■□ 3.48
SNX3-202ENST00000349379 ADCY10Q96PN6 1610 aa36.78■■■■□ 3.48
SNX3-202ENST00000349379 PTPRGP23470 1445 aa36.76■■■■□ 3.48
SNX3-202ENST00000349379 GOLGA3Q08378 1498 aa36.72■■■■□ 3.47
SNX3-202ENST00000349379 SAMD9Q5K651 1589 aa36.63■■■■□ 3.45
SNX3-202ENST00000349379 UHRF1BP1LA0JNW5 1464 aa36.59■■■■□ 3.45
SNX3-202ENST00000349379 UACAQ9BZF9 1416 aa36.56■■■■□ 3.44
SNX3-202ENST00000349379 MAPKBP1O60336 1514 aa36.55■■■■□ 3.44
SNX3-202ENST00000349379 ABCC2Q92887 1545 aa36.55■■■■□ 3.44
SNX3-202ENST00000349379 TTBK1Q5TCY1 1321 aaPredicted RBP36.55■■■■□ 3.44
SNX3-202ENST00000349379 TRHP20396 242 aaPredicted RBP36.53■■■■□ 3.44
SNX3-202ENST00000349379 KIF13AQ9H1H9 1805 aa36.48■■■■□ 3.43
SNX3-202ENST00000349379 ABCA8O94911 1581 aa36.47■■■■□ 3.43
SNX3-202ENST00000349379 NPM1P06748 294 aaKnown RBP eCLIP36.46■■■■□ 3.43
SNX3-202ENST00000349379 PLB1Q6P1J6 1458 aa36.43■■■■□ 3.42
SNX3-202ENST00000349379 KDM5BQ9UGL1 1544 aa36.42■■■■□ 3.42
SNX3-202ENST00000349379 EFCAB5A4FU69 1503 aa36.41■■■■□ 3.42
SNX3-202ENST00000349379 ZCCHC11Q5TAX3 1644 aaKnown RBP36.37■■■■□ 3.41
SNX3-202ENST00000349379 UBTFP17480 764 aaKnown RBP36.36■■■■□ 3.41
SNX3-202ENST00000349379 ABCC10Q5T3U5 1492 aa36.35■■■■□ 3.41
SNX3-202ENST00000349379 DIP2BQ9P265 1576 aa36.35■■■■□ 3.41
SNX3-202ENST00000349379 P3H3Q8IVL6 736 aa36.34■■■■□ 3.41
SNX3-202ENST00000349379 EHMT2Q96KQ7 1210 aa36.33■■■■□ 3.41
SNX3-202ENST00000349379 FHOD3Q2V2M9 1422 aa36.28■■■■□ 3.4
SNX3-202ENST00000349379 ASXL2Q76L83 1435 aa36.25■■■■□ 3.39
SNX3-202ENST00000349379 RANGAP1P46060 587 aaPredicted RBP36.25■■■■□ 3.39
SNX3-202ENST00000349379 RAPGEF6Q8TEU7 1601 aa36.25■■■■□ 3.39
SNX3-202ENST00000349379 ARHGAP35Q9NRY4 1499 aa36.2■■■■□ 3.39
SNX3-202ENST00000349379 FAM69CQ0P6D2 419 aa36.15■■■■□ 3.38
SNX3-202ENST00000349379 GLI2P10070 1586 aa36.15■■■■□ 3.38
SNX3-202ENST00000349379 ATP10BO94823 1461 aa36.1■■■■□ 3.37
SNX3-202ENST00000349379 WDR7Q9Y4E6 1490 aa36.09■■■■□ 3.37
SNX3-202ENST00000349379 NUP153P49790 1475 aaKnown RBP36.08■■■■□ 3.37
SNX3-202ENST00000349379 EPRSP07814 1512 aaKnown RBP36.08■■■■□ 3.37
SNX3-202ENST00000349379 TSPOAP1O95153 1857 aa36.03■■■■□ 3.36
SNX3-202ENST00000349379 FMN1Q68DA7 1419 aa36■■■■□ 3.35
SNX3-202ENST00000349379 MAP3K4Q9Y6R4 1608 aa36■■■■□ 3.35
SNX3-202ENST00000349379 PPRC1Q5VV67 1664 aaKnown RBP35.98■■■■□ 3.35
SNX3-202ENST00000349379 ARID3CA6NKF2 412 aa35.92■■■■□ 3.34
SNX3-202ENST00000349379 CLIP1P30622 1438 aa35.91■■■■□ 3.34
SNX3-202ENST00000349379 HECW1Q76N89 1606 aa35.9■■■■□ 3.34
SNX3-202ENST00000349379 CFAP43Q8NDM7 1665 aa35.89■■■■□ 3.34
SNX3-202ENST00000349379 LRRIQ1Q96JM4 1722 aa35.84■■■■□ 3.33
SNX3-202ENST00000349379 CDK13Q14004 1512 aaKnown RBP35.81■■■■□ 3.32
SNX3-202ENST00000349379 PCF11O94913 1555 aaKnown RBP35.8■■■■□ 3.32
SNX3-202ENST00000349379 ABCA9Q8IUA7 1624 aa35.79■■■■□ 3.32
SNX3-202ENST00000349379 KCNH8Q96L42 1107 aa35.76■■■■□ 3.32
SNX3-202ENST00000349379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.75■■■■□ 3.31
SNX3-202ENST00000349379 HNRNPUL2Q1KMD3 747 aaKnown RBP35.75■■■■□ 3.31
SNX3-202ENST00000349379 CEP162Q5TB80 1403 aa35.74■■■■□ 3.31
SNX3-202ENST00000349379 CASKIN1Q8WXD9 1431 aa35.74■■■■□ 3.31
SNX3-202ENST00000349379 KDM6BO15054 1643 aa35.73■■■■□ 3.31
SNX3-202ENST00000349379 TEX14Q8IWB6 1497 aa35.73■■■■□ 3.31
SNX3-202ENST00000349379 MAGI3Q5TCQ9 1506 aa35.73■■■■□ 3.31
SNX3-202ENST00000349379 LOC105371045A0A1W2PR82 267 aa35.71■■■■□ 3.31
SNX3-202ENST00000349379 CD109Q6YHK3 1445 aa35.71■■■■□ 3.31
SNX3-202ENST00000349379 FYCO1Q9BQS8 1478 aa35.67■■■■□ 3.3
SNX3-202ENST00000349379 PLEKHD1A6NEE1 506 aa35.67■■■■□ 3.3
SNX3-202ENST00000349379 ATP1B4Q9UN42 357 aaPredicted RBP35.62■■■■□ 3.29
SNX3-202ENST00000349379 CCDC18Q5T9S5 1454 aa35.61■■■■□ 3.29
SNX3-202ENST00000349379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.59■■■■□ 3.298e-7■□□□□ 8.5
SNX3-202ENST00000349379 TTC37Q6PGP7 1564 aa35.55■■■■□ 3.28
SNX3-202ENST00000349379 COL17A1Q9UMD9 1497 aaPredicted RBP35.54■■■■□ 3.28
SNX3-202ENST00000349379 TROQ12816 1431 aaPredicted RBP35.51■■■■□ 3.28
SNX3-202ENST00000349379 CDK11AQ9UQ88 783 aaPredicted RBP35.51■■■■□ 3.28
SNX3-202ENST00000349379 KIF14Q15058 1648 aa35.49■■■■□ 3.27
SNX3-202ENST00000349379 NEO1Q92859 1461 aa35.44■■■■□ 3.26
SNX3-202ENST00000349379 MYO5CQ9NQX4 1742 aa35.42■■■■□ 3.26
SNX3-202ENST00000349379 ARAP3Q8WWN8 1544 aa35.42■■■■□ 3.26
SNX3-202ENST00000349379 PHLDB1Q86UU1 1377 aa35.4■■■■□ 3.26
SNX3-202ENST00000349379 CFAP74Q9C0B2 1584 aa35.39■■■■□ 3.26
SNX3-202ENST00000349379 VPS8Q8N3P4 1428 aa35.34■■■■□ 3.25
SNX3-202ENST00000349379 PLCH2O75038 1416 aa35.33■■■■□ 3.25
SNX3-202ENST00000349379 FANCAO15360 1455 aa35.32■■■■□ 3.24
SNX3-202ENST00000349379 CDC42BPBQ9Y5S2 1711 aa35.27■■■■□ 3.24
SNX3-202ENST00000349379 AKNAQ7Z591 1439 aa35.25■■■■□ 3.23
SNX3-202ENST00000349379 CDC42BPAQ5VT25 1732 aa35.25■■■■□ 3.23
SNX3-202ENST00000349379 FRMPD1Q5SYB0 1578 aa35.25■■■■□ 3.23
SNX3-202ENST00000349379 PREX2Q70Z35 1606 aa35.24■■■■□ 3.23
SNX3-202ENST00000349379 RICTORQ6R327 1708 aa35.23■■■■□ 3.23
SNX3-202ENST00000349379 EHBP1L1Q8N3D4 1523 aa35.2■■■■□ 3.23
SNX3-202ENST00000349379 TIAM1Q13009 1591 aa35.2■■■■□ 3.23
SNX3-202ENST00000349379 ARHGAP5Q13017 1502 aa35.16■■■■□ 3.22
SNX3-202ENST00000349379 MTUS2Q5JR59 1369 aa35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms