RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.55
THSD1-202ENST00000349258 CCNB3Q8WWL7 1395 aa24.76■■□□□ 1.55
THSD1-202ENST00000349258 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
THSD1-202ENST00000349258 FBLN2P98095 1184 aa24.66■■□□□ 1.54
THSD1-202ENST00000349258 PHLDB1Q86UU1 1377 aa24.65■■□□□ 1.54
THSD1-202ENST00000349258 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
THSD1-202ENST00000349258 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
THSD1-202ENST00000349258 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
THSD1-202ENST00000349258 RRBP1Q9P2E9 1410 aaKnown RBP24.62■■□□□ 1.53
THSD1-202ENST00000349258 LRRC9Q6ZRR7 1453 aa24.61■■□□□ 1.53
THSD1-202ENST00000349258 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
THSD1-202ENST00000349258 CUL7Q14999 1698 aa24.59■■□□□ 1.53
THSD1-202ENST00000349258 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.53
THSD1-202ENST00000349258 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
THSD1-202ENST00000349258 MTUS2Q5JR59 1369 aa24.55■■□□□ 1.52
THSD1-202ENST00000349258 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
THSD1-202ENST00000349258 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
THSD1-202ENST00000349258 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
THSD1-202ENST00000349258 RAB3GAP2Q9H2M9 1393 aa24.5■■□□□ 1.51
THSD1-202ENST00000349258 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
THSD1-202ENST00000349258 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
THSD1-202ENST00000349258 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
THSD1-202ENST00000349258 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
THSD1-202ENST00000349258 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
THSD1-202ENST00000349258 CTTNBP2Q8WZ74 1663 aa24.47■■□□□ 1.51
THSD1-202ENST00000349258 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.5
THSD1-202ENST00000349258 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
THSD1-202ENST00000349258 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
THSD1-202ENST00000349258 SIN3AQ96ST3 1273 aa24.4■■□□□ 1.5
THSD1-202ENST00000349258 GRIN2BQ13224 1484 aa24.39■■□□□ 1.49
THSD1-202ENST00000349258 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.49
THSD1-202ENST00000349258 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
THSD1-202ENST00000349258 SETD5Q9C0A6 1442 aa24.35■■□□□ 1.49
THSD1-202ENST00000349258 MIER1Q8N108 512 aa24.35■■□□□ 1.49
THSD1-202ENST00000349258 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
THSD1-202ENST00000349258 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
THSD1-202ENST00000349258 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
THSD1-202ENST00000349258 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
THSD1-202ENST00000349258 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
THSD1-202ENST00000349258 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
THSD1-202ENST00000349258 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
THSD1-202ENST00000349258 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
THSD1-202ENST00000349258 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
THSD1-202ENST00000349258 SAMD9Q5K651 1589 aa24.24■■□□□ 1.47
THSD1-202ENST00000349258 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
THSD1-202ENST00000349258 WDR62O43379 1518 aa24.23■■□□□ 1.47
THSD1-202ENST00000349258 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
THSD1-202ENST00000349258 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
THSD1-202ENST00000349258 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
THSD1-202ENST00000349258 TRIM52Q96A61 297 aa24.17■■□□□ 1.46
THSD1-202ENST00000349258 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
THSD1-202ENST00000349258 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
THSD1-202ENST00000349258 MYOM3Q5VTT5 1437 aa24.15■■□□□ 1.46
THSD1-202ENST00000349258 LRRIQ1Q96JM4 1722 aa24.14■■□□□ 1.45
THSD1-202ENST00000349258 GRIN2AQ12879 1464 aa24.14■■□□□ 1.45
THSD1-202ENST00000349258 CENPBP07199 599 aaPredicted RBP24.13■■□□□ 1.45
THSD1-202ENST00000349258 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
THSD1-202ENST00000349258 ZNF777Q9ULD5 760 aaPredicted RBP24.13■■□□□ 1.45
THSD1-202ENST00000349258 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
THSD1-202ENST00000349258 JPH4Q96JJ6 628 aa24.12■■□□□ 1.45
THSD1-202ENST00000349258 EPRSP07814 1512 aaKnown RBP24.11■■□□□ 1.45
THSD1-202ENST00000349258 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
THSD1-202ENST00000349258 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
THSD1-202ENST00000349258 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
THSD1-202ENST00000349258 EHBP1L1Q8N3D4 1523 aa24.04■■□□□ 1.44
THSD1-202ENST00000349258 DISP1Q96F81 1524 aa24.03■■□□□ 1.44
THSD1-202ENST00000349258 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
THSD1-202ENST00000349258 SUPT6HQ7KZ85 1726 aaKnown RBP24.03■■□□□ 1.44
THSD1-202ENST00000349258 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
THSD1-202ENST00000349258 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
THSD1-202ENST00000349258 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
THSD1-202ENST00000349258 FOXD1Q16676 465 aa24.01■■□□□ 1.43
THSD1-202ENST00000349258 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
THSD1-202ENST00000349258 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
THSD1-202ENST00000349258 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
THSD1-202ENST00000349258 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
THSD1-202ENST00000349258 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
THSD1-202ENST00000349258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
THSD1-202ENST00000349258 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
THSD1-202ENST00000349258 NAIPQ13075 1403 aa23.96■■□□□ 1.43
THSD1-202ENST00000349258 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
THSD1-202ENST00000349258 TONSLQ96HA7 1378 aa23.96■■□□□ 1.43
THSD1-202ENST00000349258 PTPN23Q9H3S7 1636 aa23.96■■□□□ 1.43
THSD1-202ENST00000349258 DDX10Q13206 875 aaKnown RBP23.95■■□□□ 1.43
THSD1-202ENST00000349258 KIAA0556O60303 1618 aa23.95■■□□□ 1.42
THSD1-202ENST00000349258 CFDP1Q9UEE9 299 aaPredicted RBP23.94■■□□□ 1.42
THSD1-202ENST00000349258 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
THSD1-202ENST00000349258 NUP153P49790 1475 aaKnown RBP23.94■■□□□ 1.42
THSD1-202ENST00000349258 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
THSD1-202ENST00000349258 CARMIL2Q6F5E8 1435 aa23.9■■□□□ 1.42
THSD1-202ENST00000349258 PPP1R15AO75807 674 aaPredicted RBP23.89■■□□□ 1.42
THSD1-202ENST00000349258 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
THSD1-202ENST00000349258 UACAQ9BZF9 1416 aa23.86■■□□□ 1.41
THSD1-202ENST00000349258 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
THSD1-202ENST00000349258 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
THSD1-202ENST00000349258 KCNH8Q96L42 1107 aa23.81■■□□□ 1.4
THSD1-202ENST00000349258 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
THSD1-202ENST00000349258 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
THSD1-202ENST00000349258 NUP160Q12769 1436 aa23.78■■□□□ 1.4
THSD1-202ENST00000349258 MIA2Q96PC5 1412 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms