RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
CLCC1-202ENST00000348264 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
CLCC1-202ENST00000348264 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
CLCC1-202ENST00000348264 KIAA0586Q9BVV6 1533 aa22.89■■□□□ 1.26
CLCC1-202ENST00000348264 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
CLCC1-202ENST00000348264 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
CLCC1-202ENST00000348264 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
CLCC1-202ENST00000348264 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
CLCC1-202ENST00000348264 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
CLCC1-202ENST00000348264 CARMIL2Q6F5E8 1435 aa22.63■■□□□ 1.21
CLCC1-202ENST00000348264 DISP1Q96F81 1524 aa22.62■■□□□ 1.21
CLCC1-202ENST00000348264 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
CLCC1-202ENST00000348264 PRXQ9BXM0 1461 aa22.6■■□□□ 1.21
CLCC1-202ENST00000348264 PTPRGP23470 1445 aa22.6■■□□□ 1.21
CLCC1-202ENST00000348264 MAPKBP1O60336 1514 aa22.6■■□□□ 1.21
CLCC1-202ENST00000348264 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
CLCC1-202ENST00000348264 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
CLCC1-202ENST00000348264 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
CLCC1-202ENST00000348264 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLCC1-202ENST00000348264 DIP2BQ9P265 1576 aa22.52■■□□□ 1.2
CLCC1-202ENST00000348264 ABCC10Q5T3U5 1492 aa22.52■■□□□ 1.2
CLCC1-202ENST00000348264 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
CLCC1-202ENST00000348264 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
CLCC1-202ENST00000348264 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
CLCC1-202ENST00000348264 FAM69CQ0P6D2 419 aa22.44■■□□□ 1.18
CLCC1-202ENST00000348264 EEA1Q15075 1411 aa22.42■■□□□ 1.18
CLCC1-202ENST00000348264 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
CLCC1-202ENST00000348264 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
CLCC1-202ENST00000348264 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
CLCC1-202ENST00000348264 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
CLCC1-202ENST00000348264 ZCCHC11Q5TAX3 1644 aaKnown RBP22.37■■□□□ 1.17
CLCC1-202ENST00000348264 TSPOAP1O95153 1857 aa22.37■■□□□ 1.17
CLCC1-202ENST00000348264 PLB1Q6P1J6 1458 aa22.35■■□□□ 1.17
CLCC1-202ENST00000348264 ABCA8O94911 1581 aa22.33■■□□□ 1.16
CLCC1-202ENST00000348264 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
CLCC1-202ENST00000348264 SAMD9Q5K651 1589 aa22.3■■□□□ 1.16
CLCC1-202ENST00000348264 GLI2P10070 1586 aa22.29■■□□□ 1.16
CLCC1-202ENST00000348264 KIF21BO75037 1637 aa22.29■■□□□ 1.16
CLCC1-202ENST00000348264 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
CLCC1-202ENST00000348264 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
CLCC1-202ENST00000348264 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
CLCC1-202ENST00000348264 KDM6BO15054 1643 aa22.23■■□□□ 1.15
CLCC1-202ENST00000348264 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
CLCC1-202ENST00000348264 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
CLCC1-202ENST00000348264 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
CLCC1-202ENST00000348264 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.14
CLCC1-202ENST00000348264 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
CLCC1-202ENST00000348264 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
CLCC1-202ENST00000348264 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
CLCC1-202ENST00000348264 ATP10BO94823 1461 aa22.1■■□□□ 1.13
CLCC1-202ENST00000348264 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
CLCC1-202ENST00000348264 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
CLCC1-202ENST00000348264 TEX14Q8IWB6 1497 aa22.07■■□□□ 1.12
CLCC1-202ENST00000348264 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
CLCC1-202ENST00000348264 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
CLCC1-202ENST00000348264 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
CLCC1-202ENST00000348264 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
CLCC1-202ENST00000348264 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
CLCC1-202ENST00000348264 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
CLCC1-202ENST00000348264 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
CLCC1-202ENST00000348264 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
CLCC1-202ENST00000348264 ABCA9Q8IUA7 1624 aa21.97■■□□□ 1.11
CLCC1-202ENST00000348264 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CLCC1-202ENST00000348264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
CLCC1-202ENST00000348264 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
CLCC1-202ENST00000348264 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.09
CLCC1-202ENST00000348264 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
CLCC1-202ENST00000348264 FMN1Q68DA7 1419 aa21.86■■□□□ 1.09
CLCC1-202ENST00000348264 KDM4FA0A1W2PPD8 638 aa21.83■■□□□ 1.09
CLCC1-202ENST00000348264 ARAP3Q8WWN8 1544 aa21.82■■□□□ 1.08
CLCC1-202ENST00000348264 TTC37Q6PGP7 1564 aa21.81■■□□□ 1.08
CLCC1-202ENST00000348264 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
CLCC1-202ENST00000348264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLCC1-202ENST00000348264 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
CLCC1-202ENST00000348264 NEO1Q92859 1461 aa21.78■■□□□ 1.08
CLCC1-202ENST00000348264 ADGRL1O94910 1474 aa21.77■■□□□ 1.08
CLCC1-202ENST00000348264 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
CLCC1-202ENST00000348264 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
CLCC1-202ENST00000348264 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
CLCC1-202ENST00000348264 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
CLCC1-202ENST00000348264 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
CLCC1-202ENST00000348264 FANCAO15360 1455 aa21.7■■□□□ 1.06
CLCC1-202ENST00000348264 KIF14Q15058 1648 aa21.69■■□□□ 1.06
CLCC1-202ENST00000348264 RAPGEF3O95398 923 aa21.68■■□□□ 1.06
CLCC1-202ENST00000348264 CLIP1P30622 1438 aa21.68■■□□□ 1.06
CLCC1-202ENST00000348264 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
CLCC1-202ENST00000348264 RICTORQ6R327 1708 aa21.67■■□□□ 1.06
CLCC1-202ENST00000348264 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
CLCC1-202ENST00000348264 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
CLCC1-202ENST00000348264 TROQ12816 1431 aaPredicted RBP21.65■■□□□ 1.06
CLCC1-202ENST00000348264 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
CLCC1-202ENST00000348264 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
CLCC1-202ENST00000348264 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
CLCC1-202ENST00000348264 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CLCC1-202ENST00000348264 PLCH2O75038 1416 aa21.62■■□□□ 1.05
CLCC1-202ENST00000348264 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
CLCC1-202ENST00000348264 ZMYM4Q5VZL5 1548 aa21.58■■□□□ 1.04
CLCC1-202ENST00000348264 POGZQ7Z3K3 1410 aa21.54■■□□□ 1.04
CLCC1-202ENST00000348264 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
CLCC1-202ENST00000348264 ARHGAP5Q13017 1502 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms