RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
PTN-201ENST00000348225 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
PTN-201ENST00000348225 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
PTN-201ENST00000348225 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
PTN-201ENST00000348225 IQGAP2Q13576 1575 aa29.15■■■□□ 2.26
PTN-201ENST00000348225 CHMP7Q8WUX9 453 aaPredicted RBP29.14■■■□□ 2.26
PTN-201ENST00000348225 SAMD9Q5K651 1589 aa29.11■■■□□ 2.25
PTN-201ENST00000348225 TRIM26Q12899 539 aaPredicted RBP29.1■■■□□ 2.25
PTN-201ENST00000348225 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
PTN-201ENST00000348225 APLP2Q06481 763 aa29.06■■■□□ 2.24
PTN-201ENST00000348225 FBLN2P98095 1184 aa29.03■■■□□ 2.24
PTN-201ENST00000348225 FHOD3Q2V2M9 1422 aa29.03■■■□□ 2.24
PTN-201ENST00000348225 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
PTN-201ENST00000348225 PPARGC1BQ86YN6 1023 aaKnown RBP29.02■■■□□ 2.24
PTN-201ENST00000348225 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
PTN-201ENST00000348225 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
PTN-201ENST00000348225 NUP160Q12769 1436 aa29.01■■■□□ 2.23
PTN-201ENST00000348225 P3H3Q8IVL6 736 aa28.99■■■□□ 2.23
PTN-201ENST00000348225 FMN1Q68DA7 1419 aa28.97■■■□□ 2.23
PTN-201ENST00000348225 CHD1O14646 1710 aa28.94■■■□□ 2.22
PTN-201ENST00000348225 PCF11O94913 1555 aaKnown RBP28.91■■■□□ 2.22
PTN-201ENST00000348225 FYCO1Q9BQS8 1478 aa28.89■■■□□ 2.22
PTN-201ENST00000348225 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PTN-201ENST00000348225 CASKIN1Q8WXD9 1431 aa28.87■■■□□ 2.21
PTN-201ENST00000348225 KIAA0556O60303 1618 aa28.85■■■□□ 2.21
PTN-201ENST00000348225 TTBK1Q5TCY1 1321 aaPredicted RBP28.83■■■□□ 2.21
PTN-201ENST00000348225 DISP1Q96F81 1524 aa28.82■■■□□ 2.2
PTN-201ENST00000348225 TIAM1Q13009 1591 aa28.82■■■□□ 2.2
PTN-201ENST00000348225 CFAP43Q8NDM7 1665 aa28.79■■■□□ 2.2
PTN-201ENST00000348225 CARMIL2Q6F5E8 1435 aa28.75■■■□□ 2.19
PTN-201ENST00000348225 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
PTN-201ENST00000348225 ATP1B4Q9UN42 357 aaPredicted RBP28.72■■■□□ 2.19
PTN-201ENST00000348225 KANK4Q5T7N3 995 aaPredicted RBP28.69■■■□□ 2.18
PTN-201ENST00000348225 HECW1Q76N89 1606 aa28.69■■■□□ 2.18
PTN-201ENST00000348225 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
PTN-201ENST00000348225 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
PTN-201ENST00000348225 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
PTN-201ENST00000348225 LRRIQ1Q96JM4 1722 aa28.62■■■□□ 2.17
PTN-201ENST00000348225 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
PTN-201ENST00000348225 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
PTN-201ENST00000348225 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.17
PTN-201ENST00000348225 EPRSP07814 1512 aaKnown RBP28.52■■■□□ 2.16
PTN-201ENST00000348225 MTUS2Q5JR59 1369 aa28.48■■■□□ 2.15
PTN-201ENST00000348225 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
PTN-201ENST00000348225 NUP153P49790 1475 aaKnown RBP28.46■■■□□ 2.15
PTN-201ENST00000348225 RRBP1Q9P2E9 1410 aaKnown RBP28.44■■■□□ 2.14
PTN-201ENST00000348225 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
PTN-201ENST00000348225 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
PTN-201ENST00000348225 ABCA8O94911 1581 aa28.42■■■□□ 2.14
PTN-201ENST00000348225 PTPRGP23470 1445 aa28.42■■■□□ 2.14
PTN-201ENST00000348225 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
PTN-201ENST00000348225 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
PTN-201ENST00000348225 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
PTN-201ENST00000348225 MAGI3Q5TCQ9 1506 aa28.36■■■□□ 2.13
PTN-201ENST00000348225 PHLDB1Q86UU1 1377 aa28.35■■■□□ 2.13
PTN-201ENST00000348225 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
PTN-201ENST00000348225 NCOA2Q15596 1464 aa28.32■■■□□ 2.12
PTN-201ENST00000348225 OSCARQ8IYS5 282 aa28.31■■■□□ 2.12
PTN-201ENST00000348225 ARID3CA6NKF2 412 aa28.3■■■□□ 2.12
PTN-201ENST00000348225 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
PTN-201ENST00000348225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
PTN-201ENST00000348225 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
PTN-201ENST00000348225 UACAQ9BZF9 1416 aa28.26■■■□□ 2.12
PTN-201ENST00000348225 MYOM3Q5VTT5 1437 aa28.21■■■□□ 2.11
PTN-201ENST00000348225 ABCC2Q92887 1545 aa28.2■■■□□ 2.11
PTN-201ENST00000348225 ATP10BO94823 1461 aa28.2■■■□□ 2.11
PTN-201ENST00000348225 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.1
PTN-201ENST00000348225 FGD6Q6ZV73 1430 aa28.2■■■□□ 2.1
PTN-201ENST00000348225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.19■■■□□ 2.1
PTN-201ENST00000348225 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
PTN-201ENST00000348225 HRCP23327 699 aa28.15■■■□□ 2.1
PTN-201ENST00000348225 UHRF1BP1LA0JNW5 1464 aa28.14■■■□□ 2.1
PTN-201ENST00000348225 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
PTN-201ENST00000348225 PLEKHD1A6NEE1 506 aa28.11■■■□□ 2.09
PTN-201ENST00000348225 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
PTN-201ENST00000348225 PTPN23Q9H3S7 1636 aa28.08■■■□□ 2.09
PTN-201ENST00000348225 KIF14Q15058 1648 aa28.07■■■□□ 2.08
PTN-201ENST00000348225 ITSN2Q9NZM3 1697 aa28.04■■■□□ 2.08
PTN-201ENST00000348225 TCOF1Q13428 1488 aaKnown RBP28.04■■■□□ 2.08
PTN-201ENST00000348225 ITGAEP38570 1179 aa28.03■■■□□ 2.08
PTN-201ENST00000348225 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
PTN-201ENST00000348225 KDM5BQ9UGL1 1544 aa28■■■□□ 2.07
PTN-201ENST00000348225 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
PTN-201ENST00000348225 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
PTN-201ENST00000348225 ABCC10Q5T3U5 1492 aa27.94■■■□□ 2.06
PTN-201ENST00000348225 GPATCH8Q9UKJ3 1502 aaKnown RBP27.93■■■□□ 2.06
PTN-201ENST00000348225 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.06
PTN-201ENST00000348225 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
PTN-201ENST00000348225 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
PTN-201ENST00000348225 CAMSAP2Q08AD1 1489 aa27.82■■■□□ 2.04
PTN-201ENST00000348225 PREX2Q70Z35 1606 aa27.81■■■□□ 2.04
PTN-201ENST00000348225 PTPRKQ15262 1439 aa27.81■■■□□ 2.04
PTN-201ENST00000348225 DNMT1P26358 1616 aaKnown RBP27.8■■■□□ 2.04
PTN-201ENST00000348225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.79■■■□□ 2.04
PTN-201ENST00000348225 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
PTN-201ENST00000348225 TTC37Q6PGP7 1564 aa27.78■■■□□ 2.04
PTN-201ENST00000348225 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
PTN-201ENST00000348225 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
PTN-201ENST00000348225 DAPK1P53355 1430 aa27.76■■■□□ 2.03
PTN-201ENST00000348225 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms