RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 CYB5RLQ6IPT4 315 aa33.92■■■■□ 3.02
CLTA-202ENST00000345519 RAPGEF2Q9Y4G8 1499 aa33.83■■■■□ 3.01
CLTA-202ENST00000345519 PRG4Q92954 1404 aaPredicted RBP33.79■■■■□ 3
CLTA-202ENST00000345519 IQGAP2Q13576 1575 aa33.79■■■■□ 3
CLTA-202ENST00000345519 CTTNBP2Q8WZ74 1663 aa33.78■■■■□ 3
CLTA-202ENST00000345519 JPH4Q96JJ6 628 aa33.77■■■■□ 3
CLTA-202ENST00000345519 PRXQ9BXM0 1461 aa33.74■■■□□ 2.99
CLTA-202ENST00000345519 EEA1Q15075 1411 aa33.63■■■□□ 2.97
CLTA-202ENST00000345519 UGGT2Q9NYU1 1516 aa33.62■■■□□ 2.97
CLTA-202ENST00000345519 DISP1Q96F81 1524 aa33.54■■■□□ 2.96
CLTA-202ENST00000345519 ADCY10Q96PN6 1610 aa33.53■■■□□ 2.96
CLTA-202ENST00000345519 KIAA0556O60303 1618 aa33.5■■■□□ 2.95
CLTA-202ENST00000345519 CARMIL2Q6F5E8 1435 aa33.48■■■□□ 2.95
CLTA-202ENST00000345519 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
CLTA-202ENST00000345519 KIF21BO75037 1637 aa33.43■■■□□ 2.94
CLTA-202ENST00000345519 CSRNP3Q8WYN3 585 aa33.41■■■□□ 2.94
CLTA-202ENST00000345519 TNIKQ9UKE5 1360 aa33.39■■■□□ 2.94
CLTA-202ENST00000345519 KIF13AQ9H1H9 1805 aa33.38■■■□□ 2.93
CLTA-202ENST00000345519 MAPKBP1O60336 1514 aa33.38■■■□□ 2.93
CLTA-202ENST00000345519 PTPRGP23470 1445 aa33.33■■■□□ 2.93
CLTA-202ENST00000345519 UHRF1BP1LA0JNW5 1464 aa33.31■■■□□ 2.92
CLTA-202ENST00000345519 GOLGA3Q08378 1498 aa33.31■■■□□ 2.92
CLTA-202ENST00000345519 SAMD9Q5K651 1589 aa33.28■■■□□ 2.92
CLTA-202ENST00000345519 ABCC2Q92887 1545 aa33.25■■■□□ 2.91
CLTA-202ENST00000345519 TRHP20396 242 aaPredicted RBP33.19■■■□□ 2.9
CLTA-202ENST00000345519 UACAQ9BZF9 1416 aa33.19■■■□□ 2.9
CLTA-202ENST00000345519 DIP2BQ9P265 1576 aa33.18■■■□□ 2.9
CLTA-202ENST00000345519 ABCA8O94911 1581 aa33.14■■■□□ 2.9
CLTA-202ENST00000345519 KDM5BQ9UGL1 1544 aa33.14■■■□□ 2.9
CLTA-202ENST00000345519 ABCC10Q5T3U5 1492 aa33.13■■■□□ 2.89
CLTA-202ENST00000345519 ZCCHC11Q5TAX3 1644 aaKnown RBP33.12■■■□□ 2.89
CLTA-202ENST00000345519 NPM1P06748 294 aaKnown RBP eCLIP33.04■■■□□ 2.88
CLTA-202ENST00000345519 PLB1Q6P1J6 1458 aa33.04■■■□□ 2.88
CLTA-202ENST00000345519 EFCAB5A4FU69 1503 aa33.03■■■□□ 2.88
CLTA-202ENST00000345519 FAM9AQ8IZU1 332 aaPredicted RBP33.03■■■□□ 2.88
CLTA-202ENST00000345519 GLI2P10070 1586 aa32.97■■■□□ 2.87
CLTA-202ENST00000345519 ASXL2Q76L83 1435 aa32.94■■■□□ 2.86
CLTA-202ENST00000345519 TTBK1Q5TCY1 1321 aaPredicted RBP32.93■■■□□ 2.86
CLTA-202ENST00000345519 RAPGEF6Q8TEU7 1601 aa32.91■■■□□ 2.86
CLTA-202ENST00000345519 PPRC1Q5VV67 1664 aaKnown RBP32.88■■■□□ 2.85
CLTA-202ENST00000345519 MAP3K4Q9Y6R4 1608 aa32.86■■■□□ 2.85
CLTA-202ENST00000345519 TSPOAP1O95153 1857 aa32.84■■■□□ 2.85
CLTA-202ENST00000345519 EPRSP07814 1512 aaKnown RBP32.82■■■□□ 2.85
CLTA-202ENST00000345519 WDR7Q9Y4E6 1490 aa32.81■■■□□ 2.84
CLTA-202ENST00000345519 FHOD3Q2V2M9 1422 aa32.8■■■□□ 2.84
CLTA-202ENST00000345519 FAM69CQ0P6D2 419 aa32.8■■■□□ 2.84
CLTA-202ENST00000345519 CFAP43Q8NDM7 1665 aa32.75■■■□□ 2.83
CLTA-202ENST00000345519 ATP10BO94823 1461 aa32.74■■■□□ 2.83
CLTA-202ENST00000345519 NUP153P49790 1475 aaKnown RBP32.74■■■□□ 2.83
CLTA-202ENST00000345519 ARHGAP35Q9NRY4 1499 aa32.74■■■□□ 2.83
CLTA-202ENST00000345519 P3H3Q8IVL6 736 aa32.73■■■□□ 2.83
CLTA-202ENST00000345519 UBTFP17480 764 aaKnown RBP32.67■■■□□ 2.82
CLTA-202ENST00000345519 KDM6BO15054 1643 aa32.62■■■□□ 2.81
CLTA-202ENST00000345519 ABCA9Q8IUA7 1624 aa32.6■■■□□ 2.81
CLTA-202ENST00000345519 FMN1Q68DA7 1419 aa32.59■■■□□ 2.81
CLTA-202ENST00000345519 HECW1Q76N89 1606 aa32.57■■■□□ 2.8
CLTA-202ENST00000345519 LRRIQ1Q96JM4 1722 aa32.57■■■□□ 2.8
CLTA-202ENST00000345519 RANGAP1P46060 587 aaPredicted RBP32.54■■■□□ 2.8
CLTA-202ENST00000345519 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
CLTA-202ENST00000345519 TEX14Q8IWB6 1497 aa32.54■■■□□ 2.8
CLTA-202ENST00000345519 EHMT2Q96KQ7 1210 aa32.5■■■□□ 2.79
CLTA-202ENST00000345519 CDK13Q14004 1512 aaKnown RBP32.43■■■□□ 2.78
CLTA-202ENST00000345519 CD109Q6YHK3 1445 aa32.43■■■□□ 2.78
CLTA-202ENST00000345519 PCF11O94913 1555 aaKnown RBP32.42■■■□□ 2.78
CLTA-202ENST00000345519 ARID3CA6NKF2 412 aa32.37■■■□□ 2.77
CLTA-202ENST00000345519 CLIP1P30622 1438 aa32.36■■■□□ 2.77
CLTA-202ENST00000345519 COL17A1Q9UMD9 1497 aaPredicted RBP32.35■■■□□ 2.77
CLTA-202ENST00000345519 CASKIN1Q8WXD9 1431 aa32.34■■■□□ 2.77
CLTA-202ENST00000345519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.32■■■□□ 2.764e-8■■□□□ 13.7
CLTA-202ENST00000345519 KCNH8Q96L42 1107 aa32.32■■■□□ 2.76
CLTA-202ENST00000345519 TTC37Q6PGP7 1564 aa32.32■■■□□ 2.76
CLTA-202ENST00000345519 FYCO1Q9BQS8 1478 aa32.31■■■□□ 2.76
CLTA-202ENST00000345519 CCDC18Q5T9S5 1454 aa32.28■■■□□ 2.76
CLTA-202ENST00000345519 ARAP3Q8WWN8 1544 aa32.27■■■□□ 2.76
CLTA-202ENST00000345519 CFAP74Q9C0B2 1584 aa32.25■■■□□ 2.75
CLTA-202ENST00000345519 NEO1Q92859 1461 aa32.24■■■□□ 2.75
CLTA-202ENST00000345519 PLEKHD1A6NEE1 506 aa32.23■■■□□ 2.75
CLTA-202ENST00000345519 MYO5CQ9NQX4 1742 aa32.22■■■□□ 2.75
CLTA-202ENST00000345519 CEP162Q5TB80 1403 aa32.21■■■□□ 2.75
CLTA-202ENST00000345519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.21■■■□□ 2.75
CLTA-202ENST00000345519 HNRNPUL2Q1KMD3 747 aaKnown RBP32.21■■■□□ 2.75
CLTA-202ENST00000345519 KIF14Q15058 1648 aa32.21■■■□□ 2.75
CLTA-202ENST00000345519 PHLDB1Q86UU1 1377 aa32.2■■■□□ 2.75
CLTA-202ENST00000345519 TROQ12816 1431 aaPredicted RBP32.17■■■□□ 2.74
CLTA-202ENST00000345519 FRMPD1Q5SYB0 1578 aa32.14■■■□□ 2.74
CLTA-202ENST00000345519 RICTORQ6R327 1708 aa32.13■■■□□ 2.73
CLTA-202ENST00000345519 CDK11AQ9UQ88 783 aaPredicted RBP32.08■■■□□ 2.73
CLTA-202ENST00000345519 CDC42BPBQ9Y5S2 1711 aa32.06■■■□□ 2.72
CLTA-202ENST00000345519 FANCAO15360 1455 aa32.06■■■□□ 2.72
CLTA-202ENST00000345519 PLCH2O75038 1416 aa32.05■■■□□ 2.72
CLTA-202ENST00000345519 PREX2Q70Z35 1606 aa32.04■■■□□ 2.72
CLTA-202ENST00000345519 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
CLTA-202ENST00000345519 ATP1B4Q9UN42 357 aaPredicted RBP32.01■■■□□ 2.71
CLTA-202ENST00000345519 AKNAQ7Z591 1439 aa31.98■■■□□ 2.71
CLTA-202ENST00000345519 ZMYM4Q5VZL5 1548 aa31.97■■■□□ 2.71
CLTA-202ENST00000345519 LOC105371045A0A1W2PR82 267 aa31.93■■■□□ 2.7
CLTA-202ENST00000345519 DENND4BO75064 1496 aaPredicted RBP31.91■■■□□ 2.7
CLTA-202ENST00000345519 ARHGEF40Q8TER5 1519 aa31.9■■■□□ 2.7
CLTA-202ENST00000345519 VPS8Q8N3P4 1428 aa31.88■■■□□ 2.69
CLTA-202ENST00000345519 ADGRL1O94910 1474 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms