RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
SEC24C-202ENST00000345254 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
SEC24C-202ENST00000345254 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
SEC24C-202ENST00000345254 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
SEC24C-202ENST00000345254 C14orf37Q86TY3 774 aa13.59□□□□□ -0.23
SEC24C-202ENST00000345254 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
SEC24C-202ENST00000345254 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
SEC24C-202ENST00000345254 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
SEC24C-202ENST00000345254 ABCC8Q09428 1581 aa13.56□□□□□ -0.24
SEC24C-202ENST00000345254 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
SEC24C-202ENST00000345254 NEFLP07196 543 aa13.55□□□□□ -0.24
SEC24C-202ENST00000345254 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
SEC24C-202ENST00000345254 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
SEC24C-202ENST00000345254 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
SEC24C-202ENST00000345254 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
SEC24C-202ENST00000345254 PTPRGP23470 1445 aa13.49□□□□□ -0.25
SEC24C-202ENST00000345254 GGT6Q6P531 493 aa13.48□□□□□ -0.25
SEC24C-202ENST00000345254 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
SEC24C-202ENST00000345254 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.26
SEC24C-202ENST00000345254 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
SEC24C-202ENST00000345254 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
SEC24C-202ENST00000345254 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
SEC24C-202ENST00000345254 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
SEC24C-202ENST00000345254 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
SEC24C-202ENST00000345254 CFTRP13569 1480 aa13.41□□□□□ -0.26
SEC24C-202ENST00000345254 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
SEC24C-202ENST00000345254 CLIP1P30622 1438 aa13.38□□□□□ -0.27
SEC24C-202ENST00000345254 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
SEC24C-202ENST00000345254 EEA1Q15075 1411 aa13.36□□□□□ -0.27
SEC24C-202ENST00000345254 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
SEC24C-202ENST00000345254 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
SEC24C-202ENST00000345254 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
SEC24C-202ENST00000345254 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
SEC24C-202ENST00000345254 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
SEC24C-202ENST00000345254 A0A0G2JS52 829 aa13.33□□□□□ -0.28
SEC24C-202ENST00000345254 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
SEC24C-202ENST00000345254 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
SEC24C-202ENST00000345254 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
SEC24C-202ENST00000345254 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
SEC24C-202ENST00000345254 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
SEC24C-202ENST00000345254 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
SEC24C-202ENST00000345254 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
SEC24C-202ENST00000345254 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
SEC24C-202ENST00000345254 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
SEC24C-202ENST00000345254 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
SEC24C-202ENST00000345254 POLA1P09884 1462 aaPredicted RBP13.25□□□□□ -0.29
SEC24C-202ENST00000345254 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
SEC24C-202ENST00000345254 KIF3BO15066 747 aa13.24□□□□□ -0.29
SEC24C-202ENST00000345254 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
SEC24C-202ENST00000345254 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
SEC24C-202ENST00000345254 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
SEC24C-202ENST00000345254 IGF1RP08069 1367 aa13.21□□□□□ -0.29
SEC24C-202ENST00000345254 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEC24C-202ENST00000345254 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
SEC24C-202ENST00000345254 SPAG9O60271 1321 aaKnown RBP13.21□□□□□ -0.29
SEC24C-202ENST00000345254 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
SEC24C-202ENST00000345254 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
SEC24C-202ENST00000345254 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
SEC24C-202ENST00000345254 MIER1Q8N108 512 aa13.15□□□□□ -0.3
SEC24C-202ENST00000345254 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
SEC24C-202ENST00000345254 RAPGEF3O95398 923 aa13.13□□□□□ -0.31
SEC24C-202ENST00000345254 KANK1Q14678 1352 aa13.13□□□□□ -0.31
SEC24C-202ENST00000345254 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
SEC24C-202ENST00000345254 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
SEC24C-202ENST00000345254 ANP32CO43423 234 aa13.1□□□□□ -0.31
SEC24C-202ENST00000345254 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
SEC24C-202ENST00000345254 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
SEC24C-202ENST00000345254 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
SEC24C-202ENST00000345254 POGKQ9P215 609 aa13.06□□□□□ -0.32
SEC24C-202ENST00000345254 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
SEC24C-202ENST00000345254 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
SEC24C-202ENST00000345254 CUX1P39880 1505 aa13.03□□□□□ -0.32
SEC24C-202ENST00000345254 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.32
SEC24C-202ENST00000345254 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
SEC24C-202ENST00000345254 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
SEC24C-202ENST00000345254 STK26Q9P289 416 aa13.01□□□□□ -0.33
SEC24C-202ENST00000345254 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
SEC24C-202ENST00000345254 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
SEC24C-202ENST00000345254 NEFMP07197 916 aa12.97□□□□□ -0.33
SEC24C-202ENST00000345254 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
SEC24C-202ENST00000345254 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
SEC24C-202ENST00000345254 GRIN2AQ12879 1464 aa12.96□□□□□ -0.33
SEC24C-202ENST00000345254 PIP4K2BP78356 416 aa12.95□□□□□ -0.34
SEC24C-202ENST00000345254 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
SEC24C-202ENST00000345254 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
SEC24C-202ENST00000345254 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
SEC24C-202ENST00000345254 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
SEC24C-202ENST00000345254 FKBP8Q14318 412 aa12.94□□□□□ -0.34
SEC24C-202ENST00000345254 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
SEC24C-202ENST00000345254 CD109Q6YHK3 1445 aa12.93□□□□□ -0.34
SEC24C-202ENST00000345254 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
SEC24C-202ENST00000345254 SOX12O15370 315 aa12.93□□□□□ -0.34
SEC24C-202ENST00000345254 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
SEC24C-202ENST00000345254 MEX3CQ5U5Q3 659 aaKnown RBP12.93□□□□□ -0.34
SEC24C-202ENST00000345254 KIAA0586Q9BVV6 1533 aa12.92□□□□□ -0.34
SEC24C-202ENST00000345254 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
SEC24C-202ENST00000345254 ABCA10Q8WWZ4 1543 aa12.91□□□□□ -0.34
SEC24C-202ENST00000345254 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
SEC24C-202ENST00000345254 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.34
SEC24C-202ENST00000345254 CEBPAP49715 358 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms