RNA–Protein interactions for RNA: ENST00000345146.6

IDH1-201, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH1, Length 2,382 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-201ENST00000345146 APLP2Q06481 763 aa17.02■□□□□ 0.32
IDH1-201ENST00000345146 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■■■■□ 21.8
IDH1-201ENST00000345146 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
IDH1-201ENST00000345146 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
IDH1-201ENST00000345146 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
IDH1-201ENST00000345146 CARMIL1Q5VZK9 1371 aa16.98■□□□□ 0.31
IDH1-201ENST00000345146 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
IDH1-201ENST00000345146 GRIN2BQ13224 1484 aa16.96■□□□□ 0.3
IDH1-201ENST00000345146 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
IDH1-201ENST00000345146 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
IDH1-201ENST00000345146 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
IDH1-201ENST00000345146 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
IDH1-201ENST00000345146 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
IDH1-201ENST00000345146 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
IDH1-201ENST00000345146 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
IDH1-201ENST00000345146 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
IDH1-201ENST00000345146 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
IDH1-201ENST00000345146 MAGI1Q96QZ7 1491 aaPredicted RBP16.85■□□□□ 0.29
IDH1-201ENST00000345146 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
IDH1-201ENST00000345146 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
IDH1-201ENST00000345146 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
IDH1-201ENST00000345146 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
IDH1-201ENST00000345146 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
IDH1-201ENST00000345146 GRIN2AQ12879 1464 aa16.77■□□□□ 0.27
IDH1-201ENST00000345146 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
IDH1-201ENST00000345146 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
IDH1-201ENST00000345146 CHD1O14646 1710 aa16.73■□□□□ 0.27
IDH1-201ENST00000345146 MIER1Q8N108 512 aa16.71■□□□□ 0.27
IDH1-201ENST00000345146 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.26
IDH1-201ENST00000345146 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
IDH1-201ENST00000345146 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
IDH1-201ENST00000345146 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
IDH1-201ENST00000345146 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
IDH1-201ENST00000345146 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
IDH1-201ENST00000345146 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
IDH1-201ENST00000345146 NUP160Q12769 1436 aa16.65■□□□□ 0.26
IDH1-201ENST00000345146 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
IDH1-201ENST00000345146 FBLN2P98095 1184 aa16.62■□□□□ 0.25
IDH1-201ENST00000345146 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
IDH1-201ENST00000345146 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
IDH1-201ENST00000345146 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
IDH1-201ENST00000345146 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
IDH1-201ENST00000345146 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
IDH1-201ENST00000345146 KIAA0556O60303 1618 aa16.54■□□□□ 0.24
IDH1-201ENST00000345146 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
IDH1-201ENST00000345146 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
IDH1-201ENST00000345146 P3H3Q8IVL6 736 aa16.52■□□□□ 0.23
IDH1-201ENST00000345146 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
IDH1-201ENST00000345146 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
IDH1-201ENST00000345146 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
IDH1-201ENST00000345146 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
IDH1-201ENST00000345146 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
IDH1-201ENST00000345146 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
IDH1-201ENST00000345146 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
IDH1-201ENST00000345146 ITGAEP38570 1179 aa16.46■□□□□ 0.23
IDH1-201ENST00000345146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
IDH1-201ENST00000345146 FMN1Q68DA7 1419 aa16.46■□□□□ 0.23
IDH1-201ENST00000345146 CASKIN1Q8WXD9 1431 aa16.46■□□□□ 0.23
IDH1-201ENST00000345146 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
IDH1-201ENST00000345146 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
IDH1-201ENST00000345146 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
IDH1-201ENST00000345146 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
IDH1-201ENST00000345146 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
IDH1-201ENST00000345146 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
IDH1-201ENST00000345146 HECW1Q76N89 1606 aa16.37■□□□□ 0.21
IDH1-201ENST00000345146 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
IDH1-201ENST00000345146 RAPGEF6Q8TEU7 1601 aa16.36■□□□□ 0.21
IDH1-201ENST00000345146 FGD6Q6ZV73 1430 aa16.32■□□□□ 0.2
IDH1-201ENST00000345146 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
IDH1-201ENST00000345146 ABCA8O94911 1581 aa16.3■□□□□ 0.2
IDH1-201ENST00000345146 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
IDH1-201ENST00000345146 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
IDH1-201ENST00000345146 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
IDH1-201ENST00000345146 SIN3AQ96ST3 1273 aa16.29■□□□□ 0.2
IDH1-201ENST00000345146 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
IDH1-201ENST00000345146 NUP153P49790 1475 aaKnown RBP16.28■□□□□ 0.2
IDH1-201ENST00000345146 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
IDH1-201ENST00000345146 PTPRGP23470 1445 aa16.25■□□□□ 0.19
IDH1-201ENST00000345146 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
IDH1-201ENST00000345146 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
IDH1-201ENST00000345146 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
IDH1-201ENST00000345146 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
IDH1-201ENST00000345146 PTPRKQ15262 1439 aa16.22■□□□□ 0.19
IDH1-201ENST00000345146 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
IDH1-201ENST00000345146 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
IDH1-201ENST00000345146 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
IDH1-201ENST00000345146 UACAQ9BZF9 1416 aa16.21■□□□□ 0.18
IDH1-201ENST00000345146 PTPN23Q9H3S7 1636 aa16.2■□□□□ 0.18
IDH1-201ENST00000345146 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
IDH1-201ENST00000345146 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
IDH1-201ENST00000345146 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
IDH1-201ENST00000345146 ABCC2Q92887 1545 aa16.18■□□□□ 0.18
IDH1-201ENST00000345146 NAIPQ13075 1403 aa16.17■□□□□ 0.18
IDH1-201ENST00000345146 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
IDH1-201ENST00000345146 ATP10BO94823 1461 aa16.15■□□□□ 0.18
IDH1-201ENST00000345146 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
IDH1-201ENST00000345146 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
IDH1-201ENST00000345146 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
IDH1-201ENST00000345146 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
IDH1-201ENST00000345146 ADCY10Q96PN6 1610 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms