RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.43
FOXN3-202ENST00000345097 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
FOXN3-202ENST00000345097 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
FOXN3-202ENST00000345097 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
FOXN3-202ENST00000345097 CUX2O14529 1486 aa12.32□□□□□ -0.44
FOXN3-202ENST00000345097 MIER1Q8N108 512 aa12.31□□□□□ -0.44
FOXN3-202ENST00000345097 HNRNPUQ00839 825 aaKnown RBP eCLIP12.31□□□□□ -0.44
FOXN3-202ENST00000345097 FKBP8Q14318 412 aa12.31□□□□□ -0.44
FOXN3-202ENST00000345097 TSPY4P0CV99 314 aa12.3□□□□□ -0.44
FOXN3-202ENST00000345097 TSPY10P0CW01 314 aa12.3□□□□□ -0.44
FOXN3-202ENST00000345097 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
FOXN3-202ENST00000345097 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.44
FOXN3-202ENST00000345097 NEFMP07197 916 aa12.24□□□□□ -0.45
FOXN3-202ENST00000345097 RGL3Q3MIN7 710 aa12.24□□□□□ -0.45
FOXN3-202ENST00000345097 PLEKHD1A6NEE1 506 aa12.23□□□□□ -0.45
FOXN3-202ENST00000345097 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
FOXN3-202ENST00000345097 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
FOXN3-202ENST00000345097 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
FOXN3-202ENST00000345097 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
FOXN3-202ENST00000345097 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-202ENST00000345097 TMC1Q8TDI8 760 aa12.21□□□□□ -0.46
FOXN3-202ENST00000345097 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
FOXN3-202ENST00000345097 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
FOXN3-202ENST00000345097 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
FOXN3-202ENST00000345097 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
FOXN3-202ENST00000345097 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
FOXN3-202ENST00000345097 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
FOXN3-202ENST00000345097 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.46
FOXN3-202ENST00000345097 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
FOXN3-202ENST00000345097 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
FOXN3-202ENST00000345097 TDRD9Q8NDG6 1382 aaKnown RBP12.13□□□□□ -0.47
FOXN3-202ENST00000345097 ANP32BQ92688 251 aaKnown RBP12.12□□□□□ -0.47
FOXN3-202ENST00000345097 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
FOXN3-202ENST00000345097 WDR43Q15061 677 aaKnown RBP eCLIP12.12□□□□□ -0.47
FOXN3-202ENST00000345097 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
FOXN3-202ENST00000345097 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
FOXN3-202ENST00000345097 FOXD1Q16676 465 aa12.1□□□□□ -0.47
FOXN3-202ENST00000345097 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
FOXN3-202ENST00000345097 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
FOXN3-202ENST00000345097 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
FOXN3-202ENST00000345097 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
FOXN3-202ENST00000345097 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
FOXN3-202ENST00000345097 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
FOXN3-202ENST00000345097 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
FOXN3-202ENST00000345097 CARD11Q9BXL7 1154 aa12.05□□□□□ -0.48
FOXN3-202ENST00000345097 UPF2Q9HAU5 1272 aaKnown RBP12.05□□□□□ -0.48
FOXN3-202ENST00000345097 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
FOXN3-202ENST00000345097 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
FOXN3-202ENST00000345097 C14orf37Q86TY3 774 aa12.03□□□□□ -0.48
FOXN3-202ENST00000345097 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
FOXN3-202ENST00000345097 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
FOXN3-202ENST00000345097 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
FOXN3-202ENST00000345097 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
FOXN3-202ENST00000345097 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
FOXN3-202ENST00000345097 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
FOXN3-202ENST00000345097 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
FOXN3-202ENST00000345097 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
FOXN3-202ENST00000345097 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
FOXN3-202ENST00000345097 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
FOXN3-202ENST00000345097 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
FOXN3-202ENST00000345097 MLECQ14165 292 aa11.97□□□□□ -0.49
FOXN3-202ENST00000345097 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
FOXN3-202ENST00000345097 A0A0G2JS52 829 aa11.95□□□□□ -0.5
FOXN3-202ENST00000345097 NBR1Q14596 966 aa11.95□□□□□ -0.5
FOXN3-202ENST00000345097 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
FOXN3-202ENST00000345097 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
FOXN3-202ENST00000345097 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
FOXN3-202ENST00000345097 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
FOXN3-202ENST00000345097 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
FOXN3-202ENST00000345097 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
FOXN3-202ENST00000345097 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.58e-7■■■■□ 20.1
FOXN3-202ENST00000345097 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
FOXN3-202ENST00000345097 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
FOXN3-202ENST00000345097 PKD2Q13563 968 aa11.9□□□□□ -0.5
FOXN3-202ENST00000345097 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
FOXN3-202ENST00000345097 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.51
FOXN3-202ENST00000345097 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
FOXN3-202ENST00000345097 HSPA5P11021 654 aaKnown RBP11.89□□□□□ -0.51
FOXN3-202ENST00000345097 POGKQ9P215 609 aa11.89□□□□□ -0.51
FOXN3-202ENST00000345097 GGT6Q6P531 493 aa11.89□□□□□ -0.51
FOXN3-202ENST00000345097 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
FOXN3-202ENST00000345097 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
FOXN3-202ENST00000345097 KANK1Q14678 1352 aa11.87□□□□□ -0.51
FOXN3-202ENST00000345097 ARXQ96QS3 562 aa11.87□□□□□ -0.51
FOXN3-202ENST00000345097 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
FOXN3-202ENST00000345097 STK26Q9P289 416 aa11.85□□□□□ -0.51
FOXN3-202ENST00000345097 SOX12O15370 315 aa11.84□□□□□ -0.51
FOXN3-202ENST00000345097 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
FOXN3-202ENST00000345097 NUP155O75694 1391 aa11.83□□□□□ -0.51
FOXN3-202ENST00000345097 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.51
FOXN3-202ENST00000345097 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
FOXN3-202ENST00000345097 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
FOXN3-202ENST00000345097 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
FOXN3-202ENST00000345097 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
FOXN3-202ENST00000345097 NESP48681 1621 aa11.82□□□□□ -0.52
FOXN3-202ENST00000345097 CCDC18Q5T9S5 1454 aa11.82□□□□□ -0.52
FOXN3-202ENST00000345097 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
FOXN3-202ENST00000345097 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
FOXN3-202ENST00000345097 TMF1P82094 1093 aa11.82□□□□□ -0.52
FOXN3-202ENST00000345097 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms