RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
TCF3-202ENST00000344749 SALL2Q9Y467 1007 aaPredicted RBP18.01■□□□□ 0.47
TCF3-202ENST00000344749 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
TCF3-202ENST00000344749 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
TCF3-202ENST00000344749 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
TCF3-202ENST00000344749 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
TCF3-202ENST00000344749 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
TCF3-202ENST00000344749 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
TCF3-202ENST00000344749 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
TCF3-202ENST00000344749 MRS2Q9HD23 443 aa17.93■□□□□ 0.46
TCF3-202ENST00000344749 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
TCF3-202ENST00000344749 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.463e-7■■■■■ 49.2
TCF3-202ENST00000344749 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
TCF3-202ENST00000344749 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
TCF3-202ENST00000344749 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
TCF3-202ENST00000344749 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.46
TCF3-202ENST00000344749 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
TCF3-202ENST00000344749 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
TCF3-202ENST00000344749 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
TCF3-202ENST00000344749 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
TCF3-202ENST00000344749 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
TCF3-202ENST00000344749 FOXD1Q16676 465 aa17.83■□□□□ 0.44
TCF3-202ENST00000344749 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
TCF3-202ENST00000344749 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TCF3-202ENST00000344749 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
TCF3-202ENST00000344749 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
TCF3-202ENST00000344749 BCL11AQ9H165 835 aa17.75■□□□□ 0.43
TCF3-202ENST00000344749 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
TCF3-202ENST00000344749 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
TCF3-202ENST00000344749 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
TCF3-202ENST00000344749 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
TCF3-202ENST00000344749 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
TCF3-202ENST00000344749 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
TCF3-202ENST00000344749 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
TCF3-202ENST00000344749 IGF1RP08069 1367 aa17.69■□□□□ 0.42
TCF3-202ENST00000344749 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
TCF3-202ENST00000344749 CARD11Q9BXL7 1154 aa17.67■□□□□ 0.42
TCF3-202ENST00000344749 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
TCF3-202ENST00000344749 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
TCF3-202ENST00000344749 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
TCF3-202ENST00000344749 FMN1Q68DA7 1419 aa17.64■□□□□ 0.41
TCF3-202ENST00000344749 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
TCF3-202ENST00000344749 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
TCF3-202ENST00000344749 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
TCF3-202ENST00000344749 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
TCF3-202ENST00000344749 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
TCF3-202ENST00000344749 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
TCF3-202ENST00000344749 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
TCF3-202ENST00000344749 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
TCF3-202ENST00000344749 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
TCF3-202ENST00000344749 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
TCF3-202ENST00000344749 KIF21BO75037 1637 aa17.58■□□□□ 0.4
TCF3-202ENST00000344749 PKD2Q13563 968 aa17.58■□□□□ 0.4
TCF3-202ENST00000344749 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
TCF3-202ENST00000344749 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
TCF3-202ENST00000344749 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
TCF3-202ENST00000344749 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
TCF3-202ENST00000344749 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
TCF3-202ENST00000344749 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
TCF3-202ENST00000344749 NEFMP07197 916 aa17.5■□□□□ 0.39
TCF3-202ENST00000344749 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
TCF3-202ENST00000344749 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
TCF3-202ENST00000344749 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
TCF3-202ENST00000344749 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.389e-9■■■■■ 30
TCF3-202ENST00000344749 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
TCF3-202ENST00000344749 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
TCF3-202ENST00000344749 NUP155O75694 1391 aa17.44■□□□□ 0.38
TCF3-202ENST00000344749 CFTRP13569 1480 aa17.44■□□□□ 0.38
TCF3-202ENST00000344749 NESP48681 1621 aa17.43■□□□□ 0.38
TCF3-202ENST00000344749 NBR1Q14596 966 aa17.42■□□□□ 0.38
TCF3-202ENST00000344749 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
TCF3-202ENST00000344749 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
TCF3-202ENST00000344749 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
TCF3-202ENST00000344749 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
TCF3-202ENST00000344749 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
TCF3-202ENST00000344749 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TCF3-202ENST00000344749 CUX1P39880 1505 aa17.39■□□□□ 0.37
TCF3-202ENST00000344749 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
TCF3-202ENST00000344749 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
TCF3-202ENST00000344749 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
TCF3-202ENST00000344749 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
TCF3-202ENST00000344749 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■■■■ 29.3
TCF3-202ENST00000344749 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
TCF3-202ENST00000344749 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.37
TCF3-202ENST00000344749 ANKRD30AQ9BXX3 1397 aa17.33■□□□□ 0.36
TCF3-202ENST00000344749 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
TCF3-202ENST00000344749 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
TCF3-202ENST00000344749 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.32■□□□□ 0.36
TCF3-202ENST00000344749 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
TCF3-202ENST00000344749 GGT6Q6P531 493 aa17.3■□□□□ 0.36
TCF3-202ENST00000344749 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
TCF3-202ENST00000344749 TMF1P82094 1093 aa17.28■□□□□ 0.36
TCF3-202ENST00000344749 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
TCF3-202ENST00000344749 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
TCF3-202ENST00000344749 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.35
TCF3-202ENST00000344749 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
TCF3-202ENST00000344749 RRBP1Q9P2E9 1410 aaKnown RBP17.25■□□□□ 0.35
TCF3-202ENST00000344749 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TCF3-202ENST00000344749 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
TCF3-202ENST00000344749 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms