RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
CLDN18-202ENST00000343735 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
CLDN18-202ENST00000343735 FBLN2P98095 1184 aa15.4■□□□□ 0.06
CLDN18-202ENST00000343735 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
CLDN18-202ENST00000343735 CLIP1P30622 1438 aa15.39■□□□□ 0.05
CLDN18-202ENST00000343735 KIAA0586Q9BVV6 1533 aa15.35■□□□□ 0.05
CLDN18-202ENST00000343735 NUP160Q12769 1436 aa15.33■□□□□ 0.05
CLDN18-202ENST00000343735 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
CLDN18-202ENST00000343735 EFCAB5A4FU69 1503 aa15.32■□□□□ 0.04
CLDN18-202ENST00000343735 CHD1O14646 1710 aa15.29■□□□□ 0.04
CLDN18-202ENST00000343735 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
CLDN18-202ENST00000343735 HRCP23327 699 aa15.28■□□□□ 0.04
CLDN18-202ENST00000343735 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
CLDN18-202ENST00000343735 UGGT2Q9NYU1 1516 aa15.26■□□□□ 0.03
CLDN18-202ENST00000343735 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
CLDN18-202ENST00000343735 JPH4Q96JJ6 628 aa15.23■□□□□ 0.03
CLDN18-202ENST00000343735 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
CLDN18-202ENST00000343735 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
CLDN18-202ENST00000343735 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
CLDN18-202ENST00000343735 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
CLDN18-202ENST00000343735 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
CLDN18-202ENST00000343735 APLP2Q06481 763 aa15.17■□□□□ 0.02
CLDN18-202ENST00000343735 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
CLDN18-202ENST00000343735 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
CLDN18-202ENST00000343735 FHOD3Q2V2M9 1422 aa15.15■□□□□ 0.02
CLDN18-202ENST00000343735 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
CLDN18-202ENST00000343735 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
CLDN18-202ENST00000343735 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
CLDN18-202ENST00000343735 PRG4Q92954 1404 aaPredicted RBP15.13■□□□□ 0.01
CLDN18-202ENST00000343735 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CLDN18-202ENST00000343735 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
CLDN18-202ENST00000343735 MAP3K1Q13233 1512 aa15.06■□□□□ 0
CLDN18-202ENST00000343735 PTPRGP23470 1445 aa15.04■□□□□ -0
CLDN18-202ENST00000343735 ATP1B4Q9UN42 357 aaPredicted RBP15.03■□□□□ -0
CLDN18-202ENST00000343735 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
CLDN18-202ENST00000343735 HECW1Q76N89 1606 aa15.02□□□□□ -0.01
CLDN18-202ENST00000343735 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
CLDN18-202ENST00000343735 RAPGEF6Q8TEU7 1601 aa14.99□□□□□ -0.01
CLDN18-202ENST00000343735 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
CLDN18-202ENST00000343735 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
CLDN18-202ENST00000343735 ABCA8O94911 1581 aa14.95□□□□□ -0.02
CLDN18-202ENST00000343735 UACAQ9BZF9 1416 aa14.95□□□□□ -0.02
CLDN18-202ENST00000343735 CFAP43Q8NDM7 1665 aa14.94□□□□□ -0.02
CLDN18-202ENST00000343735 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
CLDN18-202ENST00000343735 EPRSP07814 1512 aaKnown RBP14.94□□□□□ -0.02
CLDN18-202ENST00000343735 PLB1Q6P1J6 1458 aa14.93□□□□□ -0.02
CLDN18-202ENST00000343735 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
CLDN18-202ENST00000343735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
CLDN18-202ENST00000343735 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
CLDN18-202ENST00000343735 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
CLDN18-202ENST00000343735 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
CLDN18-202ENST00000343735 MTUS2Q5JR59 1369 aa14.9□□□□□ -0.02
CLDN18-202ENST00000343735 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
CLDN18-202ENST00000343735 ABCC2Q92887 1545 aa14.89□□□□□ -0.03
CLDN18-202ENST00000343735 KANK4Q5T7N3 995 aaPredicted RBP14.89□□□□□ -0.03
CLDN18-202ENST00000343735 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
CLDN18-202ENST00000343735 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
CLDN18-202ENST00000343735 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
CLDN18-202ENST00000343735 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
CLDN18-202ENST00000343735 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
CLDN18-202ENST00000343735 ATP10BO94823 1461 aa14.84□□□□□ -0.03
CLDN18-202ENST00000343735 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
CLDN18-202ENST00000343735 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLDN18-202ENST00000343735 KDM5BQ9UGL1 1544 aa14.81□□□□□ -0.04
CLDN18-202ENST00000343735 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
CLDN18-202ENST00000343735 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
CLDN18-202ENST00000343735 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
CLDN18-202ENST00000343735 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
CLDN18-202ENST00000343735 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
CLDN18-202ENST00000343735 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
CLDN18-202ENST00000343735 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
CLDN18-202ENST00000343735 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
CLDN18-202ENST00000343735 NCOA2Q15596 1464 aa14.76□□□□□ -0.05
CLDN18-202ENST00000343735 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
CLDN18-202ENST00000343735 ZCCHC11Q5TAX3 1644 aaKnown RBP14.75□□□□□ -0.05
CLDN18-202ENST00000343735 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
CLDN18-202ENST00000343735 KIF14Q15058 1648 aa14.73□□□□□ -0.05
CLDN18-202ENST00000343735 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
CLDN18-202ENST00000343735 PHLDB1Q86UU1 1377 aa14.72□□□□□ -0.05
CLDN18-202ENST00000343735 CCNB3Q8WWL7 1395 aa14.72□□□□□ -0.05
CLDN18-202ENST00000343735 MYOM3Q5VTT5 1437 aa14.72□□□□□ -0.05
CLDN18-202ENST00000343735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.06
CLDN18-202ENST00000343735 MIA2Q96PC5 1412 aa14.7□□□□□ -0.06
CLDN18-202ENST00000343735 WDR7Q9Y4E6 1490 aa14.68□□□□□ -0.06
CLDN18-202ENST00000343735 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
CLDN18-202ENST00000343735 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
CLDN18-202ENST00000343735 ITSN2Q9NZM3 1697 aa14.66□□□□□ -0.06
CLDN18-202ENST00000343735 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
CLDN18-202ENST00000343735 ITGAEP38570 1179 aa14.65□□□□□ -0.06
CLDN18-202ENST00000343735 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
CLDN18-202ENST00000343735 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
CLDN18-202ENST00000343735 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
CLDN18-202ENST00000343735 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
CLDN18-202ENST00000343735 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
CLDN18-202ENST00000343735 GPATCH8Q9UKJ3 1502 aaKnown RBP14.63□□□□□ -0.07
CLDN18-202ENST00000343735 MAPKBP1O60336 1514 aa14.63□□□□□ -0.07
CLDN18-202ENST00000343735 TCOF1Q13428 1488 aaKnown RBP14.62□□□□□ -0.07
CLDN18-202ENST00000343735 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
CLDN18-202ENST00000343735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLDN18-202ENST00000343735 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms