RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 FHAD1B1AJZ9 1412 aa7.73□□□□□ -1.17
VAV3-201ENST00000343258 CYB5RLQ6IPT4 315 aa7.72□□□□□ -1.17
VAV3-201ENST00000343258 KIF27Q86VH2 1401 aa7.72□□□□□ -1.17
VAV3-201ENST00000343258 ERICH3Q5RHP9 1530 aa7.72□□□□□ -1.17
VAV3-201ENST00000343258 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
VAV3-201ENST00000343258 MYT1Q01538 1121 aa7.71□□□□□ -1.17
VAV3-201ENST00000343258 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
VAV3-201ENST00000343258 NUP160Q12769 1436 aa7.7□□□□□ -1.18
VAV3-201ENST00000343258 ARAP1Q96P48 1450 aa7.69□□□□□ -1.18
VAV3-201ENST00000343258 ERCC6L2Q5T890 1561 aa7.68□□□□□ -1.18
VAV3-201ENST00000343258 KCNA4P22459 653 aa7.67□□□□□ -1.18
VAV3-201ENST00000343258 CARMIL1Q5VZK9 1371 aa7.67□□□□□ -1.18
VAV3-201ENST00000343258 FAM9AQ8IZU1 332 aaPredicted RBP7.65□□□□□ -1.19
VAV3-201ENST00000343258 JPH4Q96JJ6 628 aa7.65□□□□□ -1.19
VAV3-201ENST00000343258 PRG4Q92954 1404 aaPredicted RBP7.63□□□□□ -1.19
VAV3-201ENST00000343258 CUL7Q14999 1698 aa7.62□□□□□ -1.19
VAV3-201ENST00000343258 PPP4R3CPQ6ZMV5 832 aa7.62□□□□□ -1.19
VAV3-201ENST00000343258 SHROOM2Q13796 1616 aa7.61□□□□□ -1.19
VAV3-201ENST00000343258 KIAA0586Q9BVV6 1533 aa7.6□□□□□ -1.19
VAV3-201ENST00000343258 TTBK1Q5TCY1 1321 aaPredicted RBP7.6□□□□□ -1.19
VAV3-201ENST00000343258 RAPGEF2Q9Y4G8 1499 aa7.6□□□□□ -1.19
VAV3-201ENST00000343258 EHMT2Q96KQ7 1210 aa7.6□□□□□ -1.19
VAV3-201ENST00000343258 CSRNP3Q8WYN3 585 aa7.59□□□□□ -1.19
VAV3-201ENST00000343258 PRXQ9BXM0 1461 aa7.58□□□□□ -1.2
VAV3-201ENST00000343258 TRHP20396 242 aaPredicted RBP7.56□□□□□ -1.2
VAV3-201ENST00000343258 IQGAP2Q13576 1575 aa7.55□□□□□ -1.2
VAV3-201ENST00000343258 DISP1Q96F81 1524 aa7.54□□□□□ -1.2
VAV3-201ENST00000343258 RANGAP1P46060 587 aaPredicted RBP7.54□□□□□ -1.2
VAV3-201ENST00000343258 MAPK8IP2Q13387 824 aaPredicted RBP7.53□□□□□ -1.2
VAV3-201ENST00000343258 P3H3Q8IVL6 736 aa7.53□□□□□ -1.2
VAV3-201ENST00000343258 PTPRGP23470 1445 aa7.52□□□□□ -1.21
VAV3-201ENST00000343258 EEA1Q15075 1411 aa7.51□□□□□ -1.21
VAV3-201ENST00000343258 TNIKQ9UKE5 1360 aa7.51□□□□□ -1.21
VAV3-201ENST00000343258 UGGT2Q9NYU1 1516 aa7.51□□□□□ -1.21
VAV3-201ENST00000343258 CARMIL2Q6F5E8 1435 aa7.5□□□□□ -1.21
VAV3-201ENST00000343258 ADCY10Q96PN6 1610 aa7.5□□□□□ -1.21
VAV3-201ENST00000343258 KIAA0556O60303 1618 aa7.48□□□□□ -1.21
VAV3-201ENST00000343258 CTTNBP2Q8WZ74 1663 aa7.48□□□□□ -1.21
VAV3-201ENST00000343258 ARID3CA6NKF2 412 aa7.48□□□□□ -1.21
VAV3-201ENST00000343258 PLB1Q6P1J6 1458 aa7.47□□□□□ -1.21
VAV3-201ENST00000343258 UBTFP17480 764 aaKnown RBP7.47□□□□□ -1.21
VAV3-201ENST00000343258 UACAQ9BZF9 1416 aa7.46□□□□□ -1.22
VAV3-201ENST00000343258 NPM1P06748 294 aaKnown RBP eCLIP7.46□□□□□ -1.22
VAV3-201ENST00000343258 KIF21BO75037 1637 aa7.45□□□□□ -1.22
VAV3-201ENST00000343258 ABCC2Q92887 1545 aa7.44□□□□□ -1.22
VAV3-201ENST00000343258 FHOD3Q2V2M9 1422 aa7.44□□□□□ -1.22
VAV3-201ENST00000343258 FAM69CQ0P6D2 419 aa7.44□□□□□ -1.22
VAV3-201ENST00000343258 GOLGA3Q08378 1498 aa7.43□□□□□ -1.22
VAV3-201ENST00000343258 HRCP23327 699 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 UHRF1BP1LA0JNW5 1464 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 ASXL2Q76L83 1435 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 MAPKBP1O60336 1514 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 ABCC10Q5T3U5 1492 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 SAMD9Q5K651 1589 aa7.42□□□□□ -1.22
VAV3-201ENST00000343258 KDM5BQ9UGL1 1544 aa7.41□□□□□ -1.22
VAV3-201ENST00000343258 ABCA8O94911 1581 aa7.41□□□□□ -1.22
VAV3-201ENST00000343258 KIF13AQ9H1H9 1805 aa7.4□□□□□ -1.22
VAV3-201ENST00000343258 DIP2BQ9P265 1576 aa7.4□□□□□ -1.22
VAV3-201ENST00000343258 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
VAV3-201ENST00000343258 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
VAV3-201ENST00000343258 ZCCHC11Q5TAX3 1644 aaKnown RBP7.39□□□□□ -1.23
VAV3-201ENST00000343258 NPM3O75607 178 aaKnown RBP7.39□□□□□ -1.23
VAV3-201ENST00000343258 ARHGAP35Q9NRY4 1499 aa7.39□□□□□ -1.23
VAV3-201ENST00000343258 ATP10BO94823 1461 aa7.38□□□□□ -1.23
VAV3-201ENST00000343258 NUP153P49790 1475 aaKnown RBP7.37□□□□□ -1.23
VAV3-201ENST00000343258 EPRSP07814 1512 aaKnown RBP7.36□□□□□ -1.23
VAV3-201ENST00000343258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.36□□□□□ -1.23
VAV3-201ENST00000343258 HNRNPUL2Q1KMD3 747 aaKnown RBP7.36□□□□□ -1.23
VAV3-201ENST00000343258 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
VAV3-201ENST00000343258 WDR7Q9Y4E6 1490 aa7.36□□□□□ -1.23
VAV3-201ENST00000343258 EFCAB5A4FU69 1503 aa7.35□□□□□ -1.23
VAV3-201ENST00000343258 TSPOAP1O95153 1857 aa7.35□□□□□ -1.23
VAV3-201ENST00000343258 RAPGEF6Q8TEU7 1601 aa7.35□□□□□ -1.23
VAV3-201ENST00000343258 SCAF1Q9H7N4 1312 aaKnown RBP7.34□□□□□ -1.23
VAV3-201ENST00000343258 CDK13Q14004 1512 aaKnown RBP7.34□□□□□ -1.24
VAV3-201ENST00000343258 CLIP1P30622 1438 aa7.33□□□□□ -1.24
VAV3-201ENST00000343258 COL17A1Q9UMD9 1497 aaPredicted RBP7.33□□□□□ -1.24
VAV3-201ENST00000343258 NCBP3Q53F19 620 aaKnown RBP7.32□□□□□ -1.24
VAV3-201ENST00000343258 CNKSR2Q8WXI2 1034 aa7.32□□□□□ -1.24
VAV3-201ENST00000343258 PPRC1Q5VV67 1664 aaKnown RBP7.32□□□□□ -1.24
VAV3-201ENST00000343258 GLI2P10070 1586 aa7.32□□□□□ -1.24
VAV3-201ENST00000343258 FMN1Q68DA7 1419 aa7.31□□□□□ -1.24
VAV3-201ENST00000343258 CD109Q6YHK3 1445 aa7.31□□□□□ -1.24
VAV3-201ENST00000343258 CEP162Q5TB80 1403 aa7.3□□□□□ -1.24
VAV3-201ENST00000343258 MAP3K4Q9Y6R4 1608 aa7.3□□□□□ -1.24
VAV3-201ENST00000343258 PLEKHD1A6NEE1 506 aa7.29□□□□□ -1.24
VAV3-201ENST00000343258 PPARGC1BQ86YN6 1023 aaKnown RBP7.29□□□□□ -1.24
VAV3-201ENST00000343258 PCF11O94913 1555 aaKnown RBP7.28□□□□□ -1.24
VAV3-201ENST00000343258 PRKCSHP14314 528 aaPredicted RBP7.28□□□□□ -1.24
VAV3-201ENST00000343258 KDM6BO15054 1643 aa7.27□□□□□ -1.25
VAV3-201ENST00000343258 LRRIQ1Q96JM4 1722 aa7.27□□□□□ -1.25
VAV3-201ENST00000343258 CASKIN1Q8WXD9 1431 aa7.27□□□□□ -1.25
VAV3-201ENST00000343258 HECW1Q76N89 1606 aa7.26□□□□□ -1.25
VAV3-201ENST00000343258 MAGI3Q5TCQ9 1506 aa7.26□□□□□ -1.25
VAV3-201ENST00000343258 RAPGEF3O95398 923 aa7.25□□□□□ -1.25
VAV3-201ENST00000343258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.25□□□□□ -1.25
VAV3-201ENST00000343258 TTC37Q6PGP7 1564 aa7.25□□□□□ -1.25
VAV3-201ENST00000343258 ABCA9Q8IUA7 1624 aa7.25□□□□□ -1.25
VAV3-201ENST00000343258 CACNB1Q02641 598 aaPredicted RBP7.25□□□□□ -1.25
VAV3-201ENST00000343258 TEX14Q8IWB6 1497 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms