RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
HLA-DQA1-201ENST00000343139 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
HLA-DQA1-201ENST00000343139 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
HLA-DQA1-201ENST00000343139 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
HLA-DQA1-201ENST00000343139 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
HLA-DQA1-201ENST00000343139 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
HLA-DQA1-201ENST00000343139 PRG4Q92954 1404 aaPredicted RBP21.85■■□□□ 1.09
HLA-DQA1-201ENST00000343139 ERCC6L2Q5T890 1561 aa21.8■■□□□ 1.08
HLA-DQA1-201ENST00000343139 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
HLA-DQA1-201ENST00000343139 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
HLA-DQA1-201ENST00000343139 UGGT2Q9NYU1 1516 aa21.72■■□□□ 1.07
HLA-DQA1-201ENST00000343139 FAM9AQ8IZU1 332 aaPredicted RBP21.69■■□□□ 1.06
HLA-DQA1-201ENST00000343139 KIF21BO75037 1637 aa21.67■■□□□ 1.06
HLA-DQA1-201ENST00000343139 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
HLA-DQA1-201ENST00000343139 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
HLA-DQA1-201ENST00000343139 CTTNBP2Q8WZ74 1663 aa21.65■■□□□ 1.06
HLA-DQA1-201ENST00000343139 PTPRGP23470 1445 aa21.61■■□□□ 1.05
HLA-DQA1-201ENST00000343139 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
HLA-DQA1-201ENST00000343139 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
HLA-DQA1-201ENST00000343139 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
HLA-DQA1-201ENST00000343139 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
HLA-DQA1-201ENST00000343139 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
HLA-DQA1-201ENST00000343139 NPM1P06748 294 aaKnown RBP eCLIP21.46■■□□□ 1.03
HLA-DQA1-201ENST00000343139 SAMD9Q5K651 1589 aa21.46■■□□□ 1.03
HLA-DQA1-201ENST00000343139 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
HLA-DQA1-201ENST00000343139 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
HLA-DQA1-201ENST00000343139 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
HLA-DQA1-201ENST00000343139 MAPKBP1O60336 1514 aa21.41■■□□□ 1.02
HLA-DQA1-201ENST00000343139 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
HLA-DQA1-201ENST00000343139 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
HLA-DQA1-201ENST00000343139 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
HLA-DQA1-201ENST00000343139 ABCA8O94911 1581 aa21.36■■□□□ 1.01
HLA-DQA1-201ENST00000343139 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
HLA-DQA1-201ENST00000343139 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
HLA-DQA1-201ENST00000343139 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
HLA-DQA1-201ENST00000343139 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
HLA-DQA1-201ENST00000343139 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
HLA-DQA1-201ENST00000343139 RANGAP1P46060 587 aaPredicted RBP21.29■■□□□ 1
HLA-DQA1-201ENST00000343139 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
HLA-DQA1-201ENST00000343139 ASXL2Q76L83 1435 aa21.25■□□□□ 0.99
HLA-DQA1-201ENST00000343139 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
HLA-DQA1-201ENST00000343139 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
HLA-DQA1-201ENST00000343139 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
HLA-DQA1-201ENST00000343139 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
HLA-DQA1-201ENST00000343139 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
HLA-DQA1-201ENST00000343139 ATP10BO94823 1461 aa21.19■□□□□ 0.98
HLA-DQA1-201ENST00000343139 NUP153P49790 1475 aaKnown RBP21.17■□□□□ 0.98
HLA-DQA1-201ENST00000343139 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
HLA-DQA1-201ENST00000343139 GLI2P10070 1586 aa21.16■□□□□ 0.98
HLA-DQA1-201ENST00000343139 CLIP1P30622 1438 aa21.16■□□□□ 0.98
HLA-DQA1-201ENST00000343139 KIF13AQ9H1H9 1805 aa21.15■□□□□ 0.98
HLA-DQA1-201ENST00000343139 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.97
HLA-DQA1-201ENST00000343139 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
HLA-DQA1-201ENST00000343139 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
HLA-DQA1-201ENST00000343139 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
HLA-DQA1-201ENST00000343139 CASKIN1Q8WXD9 1431 aa21.05■□□□□ 0.96
HLA-DQA1-201ENST00000343139 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
HLA-DQA1-201ENST00000343139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
HLA-DQA1-201ENST00000343139 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
HLA-DQA1-201ENST00000343139 PLEKHD1A6NEE1 506 aa21.02■□□□□ 0.96
HLA-DQA1-201ENST00000343139 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
HLA-DQA1-201ENST00000343139 KCNH8Q96L42 1107 aa21■□□□□ 0.95
HLA-DQA1-201ENST00000343139 FYCO1Q9BQS8 1478 aa20.99■□□□□ 0.95
HLA-DQA1-201ENST00000343139 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
HLA-DQA1-201ENST00000343139 CDK13Q14004 1512 aaKnown RBP20.97■□□□□ 0.95
HLA-DQA1-201ENST00000343139 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
HLA-DQA1-201ENST00000343139 TEX14Q8IWB6 1497 aa20.96■□□□□ 0.95
HLA-DQA1-201ENST00000343139 CD109Q6YHK3 1445 aa20.96■□□□□ 0.95
HLA-DQA1-201ENST00000343139 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
HLA-DQA1-201ENST00000343139 ATP1B4Q9UN42 357 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQA1-201ENST00000343139 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.94
HLA-DQA1-201ENST00000343139 PCF11O94913 1555 aaKnown RBP20.95■□□□□ 0.94
HLA-DQA1-201ENST00000343139 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
HLA-DQA1-201ENST00000343139 PPRC1Q5VV67 1664 aaKnown RBP20.92■□□□□ 0.94
HLA-DQA1-201ENST00000343139 TROQ12816 1431 aaPredicted RBP20.88■□□□□ 0.93
HLA-DQA1-201ENST00000343139 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
HLA-DQA1-201ENST00000343139 TSPOAP1O95153 1857 aa20.86■□□□□ 0.93
HLA-DQA1-201ENST00000343139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.85■□□□□ 0.93
HLA-DQA1-201ENST00000343139 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
HLA-DQA1-201ENST00000343139 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
HLA-DQA1-201ENST00000343139 KDM6BO15054 1643 aa20.83■□□□□ 0.93
HLA-DQA1-201ENST00000343139 NEO1Q92859 1461 aa20.81■□□□□ 0.92
HLA-DQA1-201ENST00000343139 KIF14Q15058 1648 aa20.79■□□□□ 0.92
HLA-DQA1-201ENST00000343139 PLCH2O75038 1416 aa20.78■□□□□ 0.92
HLA-DQA1-201ENST00000343139 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
HLA-DQA1-201ENST00000343139 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
HLA-DQA1-201ENST00000343139 TTC37Q6PGP7 1564 aa20.77■□□□□ 0.92
HLA-DQA1-201ENST00000343139 FANCAO15360 1455 aa20.73■□□□□ 0.91
HLA-DQA1-201ENST00000343139 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
HLA-DQA1-201ENST00000343139 CFAP74Q9C0B2 1584 aa20.71■□□□□ 0.91
HLA-DQA1-201ENST00000343139 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
HLA-DQA1-201ENST00000343139 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
HLA-DQA1-201ENST00000343139 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
HLA-DQA1-201ENST00000343139 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
HLA-DQA1-201ENST00000343139 TIAM1Q13009 1591 aa20.67■□□□□ 0.9
HLA-DQA1-201ENST00000343139 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
HLA-DQA1-201ENST00000343139 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
HLA-DQA1-201ENST00000343139 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
HLA-DQA1-201ENST00000343139 GPATCH8Q9UKJ3 1502 aaKnown RBP20.62■□□□□ 0.89
HLA-DQA1-201ENST00000343139 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms