RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 CEP170Q5SW79 1584 aa30.13■■■□□ 2.41
EGFR-202ENST00000342916 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
EGFR-202ENST00000342916 RANGAP1P46060 587 aaPredicted RBP30.11■■■□□ 2.41
EGFR-202ENST00000342916 NUP160Q12769 1436 aa30.03■■■□□ 2.4
EGFR-202ENST00000342916 IQGAP2Q13576 1575 aa29.95■■■□□ 2.38
EGFR-202ENST00000342916 KIAA0586Q9BVV6 1533 aa29.94■■■□□ 2.38
EGFR-202ENST00000342916 CLIP1P30622 1438 aa29.86■■■□□ 2.37
EGFR-202ENST00000342916 CLASP1Q7Z460 1538 aa29.85■■■□□ 2.37
EGFR-202ENST00000342916 PCGF6Q9BYE7 350 aa29.85■■■□□ 2.37
EGFR-202ENST00000342916 OSCARQ8IYS5 282 aa29.82■■■□□ 2.36
EGFR-202ENST00000342916 ARHGAP35Q9NRY4 1499 aa29.8■■■□□ 2.36
EGFR-202ENST00000342916 P3H3Q8IVL6 736 aa29.8■■■□□ 2.36
EGFR-202ENST00000342916 JPH4Q96JJ6 628 aa29.78■■■□□ 2.36
EGFR-202ENST00000342916 UGGT2Q9NYU1 1516 aa29.77■■■□□ 2.36
EGFR-202ENST00000342916 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
EGFR-202ENST00000342916 TRIM26Q12899 539 aaPredicted RBP29.73■■■□□ 2.35
EGFR-202ENST00000342916 SHROOM2Q13796 1616 aa29.73■■■□□ 2.35
EGFR-202ENST00000342916 DISP1Q96F81 1524 aa29.72■■■□□ 2.35
EGFR-202ENST00000342916 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
EGFR-202ENST00000342916 FHOD3Q2V2M9 1422 aa29.69■■■□□ 2.34
EGFR-202ENST00000342916 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
EGFR-202ENST00000342916 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
EGFR-202ENST00000342916 KIAA0556O60303 1618 aa29.67■■■□□ 2.34
EGFR-202ENST00000342916 PRG4Q92954 1404 aaPredicted RBP29.67■■■□□ 2.34
EGFR-202ENST00000342916 PPARGC1BQ86YN6 1023 aaKnown RBP29.64■■■□□ 2.34
EGFR-202ENST00000342916 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
EGFR-202ENST00000342916 VPS8Q8N3P4 1428 aa29.61■■■□□ 2.33
EGFR-202ENST00000342916 CARMIL2Q6F5E8 1435 aa29.56■■■□□ 2.32
EGFR-202ENST00000342916 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
EGFR-202ENST00000342916 FMN1Q68DA7 1419 aa29.4■■■□□ 2.3
EGFR-202ENST00000342916 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
EGFR-202ENST00000342916 PTPRGP23470 1445 aa29.38■■■□□ 2.29
EGFR-202ENST00000342916 PLB1Q6P1J6 1458 aa29.37■■■□□ 2.29
EGFR-202ENST00000342916 ATP1B4Q9UN42 357 aaPredicted RBP29.36■■■□□ 2.29
EGFR-202ENST00000342916 RIMBP3CA6NJZ7 1639 aa29.35■■■□□ 2.29
EGFR-202ENST00000342916 RIMBP3BA6NNM3 1639 aa29.35■■■□□ 2.29
EGFR-202ENST00000342916 RIMBP3Q9UFD9 1639 aa29.35■■■□□ 2.29
EGFR-202ENST00000342916 LRRIQ1Q96JM4 1722 aa29.32■■■□□ 2.28
EGFR-202ENST00000342916 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
EGFR-202ENST00000342916 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
EGFR-202ENST00000342916 RAPGEF6Q8TEU7 1601 aa29.3■■■□□ 2.28
EGFR-202ENST00000342916 FYCO1Q9BQS8 1478 aa29.27■■■□□ 2.28
EGFR-202ENST00000342916 ABCA8O94911 1581 aa29.27■■■□□ 2.28
EGFR-202ENST00000342916 NUP153P49790 1475 aaKnown RBP29.22■■■□□ 2.27
EGFR-202ENST00000342916 APLP2Q06481 763 aa29.22■■■□□ 2.27
EGFR-202ENST00000342916 HECW1Q76N89 1606 aa29.22■■■□□ 2.27
EGFR-202ENST00000342916 UACAQ9BZF9 1416 aa29.2■■■□□ 2.26
EGFR-202ENST00000342916 CDK13Q14004 1512 aaKnown RBP29.18■■■□□ 2.26
EGFR-202ENST00000342916 EPRSP07814 1512 aaKnown RBP29.15■■■□□ 2.26
EGFR-202ENST00000342916 ADCY10Q96PN6 1610 aa29.15■■■□□ 2.26
EGFR-202ENST00000342916 CYB5RLQ6IPT4 315 aa29.15■■■□□ 2.26
EGFR-202ENST00000342916 ABCC2Q92887 1545 aa29.14■■■□□ 2.26
EGFR-202ENST00000342916 HRCP23327 699 aa29.13■■■□□ 2.25
EGFR-202ENST00000342916 TIAM1Q13009 1591 aa29.13■■■□□ 2.25
EGFR-202ENST00000342916 CFAP43Q8NDM7 1665 aa29.12■■■□□ 2.25
EGFR-202ENST00000342916 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
EGFR-202ENST00000342916 ATP10BO94823 1461 aa29.07■■■□□ 2.24
EGFR-202ENST00000342916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
EGFR-202ENST00000342916 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
EGFR-202ENST00000342916 UHRF1BP1LA0JNW5 1464 aa29.06■■■□□ 2.24
EGFR-202ENST00000342916 CCDC18Q5T9S5 1454 aa29.05■■■□□ 2.24
EGFR-202ENST00000342916 MAGI3Q5TCQ9 1506 aa29.03■■■□□ 2.24
EGFR-202ENST00000342916 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
EGFR-202ENST00000342916 ZCCHC11Q5TAX3 1644 aaKnown RBP29.02■■■□□ 2.24
EGFR-202ENST00000342916 MAP3K1Q13233 1512 aa29.02■■■□□ 2.24
EGFR-202ENST00000342916 LRRC9Q6ZRR7 1453 aa28.98■■■□□ 2.23
EGFR-202ENST00000342916 KDM5BQ9UGL1 1544 aa28.98■■■□□ 2.23
EGFR-202ENST00000342916 MTUS2Q5JR59 1369 aa28.91■■■□□ 2.22
EGFR-202ENST00000342916 EHBP1L1Q8N3D4 1523 aa28.86■■■□□ 2.21
EGFR-202ENST00000342916 CDK11AQ9UQ88 783 aaPredicted RBP28.83■■■□□ 2.21
EGFR-202ENST00000342916 KIF14Q15058 1648 aa28.83■■■□□ 2.21
EGFR-202ENST00000342916 PLEKHD1A6NEE1 506 aa28.82■■■□□ 2.2
EGFR-202ENST00000342916 NPM1P06748 294 aaKnown RBP eCLIP28.82■■■□□ 2.2
EGFR-202ENST00000342916 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
EGFR-202ENST00000342916 SUPT6HQ7KZ85 1726 aaKnown RBP28.78■■■□□ 2.2
EGFR-202ENST00000342916 ASXL2Q76L83 1435 aa28.78■■■□□ 2.2
EGFR-202ENST00000342916 KCNH8Q96L42 1107 aa28.77■■■□□ 2.2
EGFR-202ENST00000342916 RRBP1Q9P2E9 1410 aaKnown RBP28.76■■■□□ 2.2
EGFR-202ENST00000342916 NCOA2Q15596 1464 aa28.76■■■□□ 2.19
EGFR-202ENST00000342916 WDR7Q9Y4E6 1490 aa28.73■■■□□ 2.19
EGFR-202ENST00000342916 PHLDB1Q86UU1 1377 aa28.73■■■□□ 2.19
EGFR-202ENST00000342916 MAPKBP1O60336 1514 aa28.68■■■□□ 2.18
EGFR-202ENST00000342916 TTC37Q6PGP7 1564 aa28.67■■■□□ 2.18
EGFR-202ENST00000342916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.65■■■□□ 2.18
EGFR-202ENST00000342916 ABCC10Q5T3U5 1492 aa28.64■■■□□ 2.18
EGFR-202ENST00000342916 CCNB3Q8WWL7 1395 aa28.64■■■□□ 2.18
EGFR-202ENST00000342916 CDC42BPAQ5VT25 1732 aa28.6■■■□□ 2.17
EGFR-202ENST00000342916 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
EGFR-202ENST00000342916 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
EGFR-202ENST00000342916 GPATCH8Q9UKJ3 1502 aaKnown RBP28.55■■■□□ 2.16
EGFR-202ENST00000342916 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
EGFR-202ENST00000342916 ABCA9Q8IUA7 1624 aa28.53■■■□□ 2.16
EGFR-202ENST00000342916 CDC42BPBQ9Y5S2 1711 aa28.53■■■□□ 2.16
EGFR-202ENST00000342916 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
EGFR-202ENST00000342916 FGD6Q6ZV73 1430 aa28.52■■■□□ 2.16
EGFR-202ENST00000342916 ITSN2Q9NZM3 1697 aa28.51■■■□□ 2.15
EGFR-202ENST00000342916 DIP2BQ9P265 1576 aa28.51■■■□□ 2.15
EGFR-202ENST00000342916 PREX2Q70Z35 1606 aa28.5■■■□□ 2.15
EGFR-202ENST00000342916 ZNF644Q9H582 1327 aaPredicted RBP28.47■■■□□ 2.15
EGFR-202ENST00000342916 KIF13AQ9H1H9 1805 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms