RNA–Protein interactions for RNA: ENST00000342022.8

CCDC30-202, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-202ENST00000342022 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
CCDC30-202ENST00000342022 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
CCDC30-202ENST00000342022 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
CCDC30-202ENST00000342022 ADRA2BP18089 450 aa11.93□□□□□ -0.5
CCDC30-202ENST00000342022 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
CCDC30-202ENST00000342022 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
CCDC30-202ENST00000342022 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
CCDC30-202ENST00000342022 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
CCDC30-202ENST00000342022 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
CCDC30-202ENST00000342022 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
CCDC30-202ENST00000342022 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
CCDC30-202ENST00000342022 WDR97A6NE52 1622 aa11.81□□□□□ -0.52
CCDC30-202ENST00000342022 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
CCDC30-202ENST00000342022 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
CCDC30-202ENST00000342022 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
CCDC30-202ENST00000342022 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
CCDC30-202ENST00000342022 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
CCDC30-202ENST00000342022 WDR62O43379 1518 aa11.77□□□□□ -0.52
CCDC30-202ENST00000342022 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
CCDC30-202ENST00000342022 CUL7Q14999 1698 aa11.73□□□□□ -0.53
CCDC30-202ENST00000342022 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
CCDC30-202ENST00000342022 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
CCDC30-202ENST00000342022 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
CCDC30-202ENST00000342022 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
CCDC30-202ENST00000342022 PCF11O94913 1555 aaKnown RBP11.68□□□□□ -0.54
CCDC30-202ENST00000342022 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
CCDC30-202ENST00000342022 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
CCDC30-202ENST00000342022 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
CCDC30-202ENST00000342022 PHLDB1Q86UU1 1377 aa11.67□□□□□ -0.54
CCDC30-202ENST00000342022 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
CCDC30-202ENST00000342022 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
CCDC30-202ENST00000342022 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
CCDC30-202ENST00000342022 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
CCDC30-202ENST00000342022 CCNB3Q8WWL7 1395 aa11.64□□□□□ -0.55
CCDC30-202ENST00000342022 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
CCDC30-202ENST00000342022 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
CCDC30-202ENST00000342022 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
CCDC30-202ENST00000342022 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
CCDC30-202ENST00000342022 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
CCDC30-202ENST00000342022 CASKIN1Q8WXD9 1431 aa11.61□□□□□ -0.55
CCDC30-202ENST00000342022 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
CCDC30-202ENST00000342022 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CCDC30-202ENST00000342022 EFCAB5A4FU69 1503 aa11.59□□□□□ -0.55
CCDC30-202ENST00000342022 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
CCDC30-202ENST00000342022 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
CCDC30-202ENST00000342022 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
CCDC30-202ENST00000342022 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
CCDC30-202ENST00000342022 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
CCDC30-202ENST00000342022 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
CCDC30-202ENST00000342022 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
CCDC30-202ENST00000342022 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
CCDC30-202ENST00000342022 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
CCDC30-202ENST00000342022 SAMD9Q5K651 1589 aa11.54□□□□□ -0.56
CCDC30-202ENST00000342022 ZNF644Q9H582 1327 aaPredicted RBP11.54□□□□□ -0.56
CCDC30-202ENST00000342022 NEUROD1Q13562 356 aa11.54□□□□□ -0.56
CCDC30-202ENST00000342022 RRBP1Q9P2E9 1410 aaKnown RBP11.53□□□□□ -0.56
CCDC30-202ENST00000342022 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
CCDC30-202ENST00000342022 KCNH8Q96L42 1107 aa11.52□□□□□ -0.56
CCDC30-202ENST00000342022 PPP6R1Q9UPN7 881 aa11.52□□□□□ -0.56
CCDC30-202ENST00000342022 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.57
CCDC30-202ENST00000342022 EPRSP07814 1512 aaKnown RBP11.51□□□□□ -0.57
CCDC30-202ENST00000342022 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
CCDC30-202ENST00000342022 NCOA2Q15596 1464 aa11.51□□□□□ -0.57
CCDC30-202ENST00000342022 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
CCDC30-202ENST00000342022 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
CCDC30-202ENST00000342022 LRRIQ1Q96JM4 1722 aa11.5□□□□□ -0.57
CCDC30-202ENST00000342022 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
CCDC30-202ENST00000342022 CDK11AQ9UQ88 783 aaPredicted RBP11.49□□□□□ -0.57
CCDC30-202ENST00000342022 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
CCDC30-202ENST00000342022 KIAA0556O60303 1618 aa11.48□□□□□ -0.57
CCDC30-202ENST00000342022 NUP160Q12769 1436 aa11.48□□□□□ -0.57
CCDC30-202ENST00000342022 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
CCDC30-202ENST00000342022 PTPRGP23470 1445 aa11.47□□□□□ -0.57
CCDC30-202ENST00000342022 PLEKHD1A6NEE1 506 aa11.47□□□□□ -0.57
CCDC30-202ENST00000342022 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
CCDC30-202ENST00000342022 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
CCDC30-202ENST00000342022 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
CCDC30-202ENST00000342022 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
CCDC30-202ENST00000342022 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
CCDC30-202ENST00000342022 CFDP1Q9UEE9 299 aaPredicted RBP11.45□□□□□ -0.58
CCDC30-202ENST00000342022 CHD1O14646 1710 aa11.45□□□□□ -0.58
CCDC30-202ENST00000342022 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
CCDC30-202ENST00000342022 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
CCDC30-202ENST00000342022 PTPRKQ15262 1439 aa11.44□□□□□ -0.58
CCDC30-202ENST00000342022 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
CCDC30-202ENST00000342022 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
CCDC30-202ENST00000342022 FOXD1Q16676 465 aa11.42□□□□□ -0.58
CCDC30-202ENST00000342022 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
CCDC30-202ENST00000342022 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
CCDC30-202ENST00000342022 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.58
CCDC30-202ENST00000342022 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.59
CCDC30-202ENST00000342022 HNRNPMP52272 730 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC30-202ENST00000342022 HIRIP3Q9BW71 556 aaPredicted RBP11.39□□□□□ -0.59
CCDC30-202ENST00000342022 EHBP1L1Q8N3D4 1523 aa11.38□□□□□ -0.59
CCDC30-202ENST00000342022 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
CCDC30-202ENST00000342022 ATP10BO94823 1461 aa11.37□□□□□ -0.59
CCDC30-202ENST00000342022 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CCDC30-202ENST00000342022 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
CCDC30-202ENST00000342022 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
CCDC30-202ENST00000342022 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms