RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 IGF1RP08069 1367 aa22.71■■□□□ 1.23
NECTIN1-203ENST00000341398 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
NECTIN1-203ENST00000341398 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
NECTIN1-203ENST00000341398 CUL7Q14999 1698 aa22.69■■□□□ 1.22
NECTIN1-203ENST00000341398 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
NECTIN1-203ENST00000341398 CARMIL1Q5VZK9 1371 aa22.59■■□□□ 1.21
NECTIN1-203ENST00000341398 KIF13AQ9H1H9 1805 aa22.58■■□□□ 1.2
NECTIN1-203ENST00000341398 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
NECTIN1-203ENST00000341398 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
NECTIN1-203ENST00000341398 ABCC10Q5T3U5 1492 aa22.49■■□□□ 1.19
NECTIN1-203ENST00000341398 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
NECTIN1-203ENST00000341398 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
NECTIN1-203ENST00000341398 PTPRGP23470 1445 aa22.48■■□□□ 1.19
NECTIN1-203ENST00000341398 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
NECTIN1-203ENST00000341398 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
NECTIN1-203ENST00000341398 IQGAP2Q13576 1575 aa22.41■■□□□ 1.18
NECTIN1-203ENST00000341398 DIP2BQ9P265 1576 aa22.39■■□□□ 1.18
NECTIN1-203ENST00000341398 RAPGEF2Q9Y4G8 1499 aa22.37■■□□□ 1.17
NECTIN1-203ENST00000341398 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
NECTIN1-203ENST00000341398 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
NECTIN1-203ENST00000341398 UACAQ9BZF9 1416 aa22.28■■□□□ 1.16
NECTIN1-203ENST00000341398 UHRF1BP1LA0JNW5 1464 aa22.27■■□□□ 1.16
NECTIN1-203ENST00000341398 PLB1Q6P1J6 1458 aa22.27■■□□□ 1.16
NECTIN1-203ENST00000341398 DISP1Q96F81 1524 aa22.27■■□□□ 1.15
NECTIN1-203ENST00000341398 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.15
NECTIN1-203ENST00000341398 KDM6BO15054 1643 aa22.26■■□□□ 1.15
NECTIN1-203ENST00000341398 ASXL2Q76L83 1435 aa22.24■■□□□ 1.15
NECTIN1-203ENST00000341398 KIAA0556O60303 1618 aa22.19■■□□□ 1.14
NECTIN1-203ENST00000341398 CTTNBP2Q8WZ74 1663 aa22.18■■□□□ 1.14
NECTIN1-203ENST00000341398 GLI2P10070 1586 aa22.18■■□□□ 1.14
NECTIN1-203ENST00000341398 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
NECTIN1-203ENST00000341398 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
NECTIN1-203ENST00000341398 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
NECTIN1-203ENST00000341398 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
NECTIN1-203ENST00000341398 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
NECTIN1-203ENST00000341398 KDM4FA0A1W2PPD8 638 aa22.1■■□□□ 1.13
NECTIN1-203ENST00000341398 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
NECTIN1-203ENST00000341398 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
NECTIN1-203ENST00000341398 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
NECTIN1-203ENST00000341398 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
NECTIN1-203ENST00000341398 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
NECTIN1-203ENST00000341398 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
NECTIN1-203ENST00000341398 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
NECTIN1-203ENST00000341398 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
NECTIN1-203ENST00000341398 ABCA8O94911 1581 aa21.98■■□□□ 1.11
NECTIN1-203ENST00000341398 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
NECTIN1-203ENST00000341398 CD109Q6YHK3 1445 aa21.93■■□□□ 1.1
NECTIN1-203ENST00000341398 CFAP43Q8NDM7 1665 aa21.92■■□□□ 1.1
NECTIN1-203ENST00000341398 COL17A1Q9UMD9 1497 aaPredicted RBP21.91■■□□□ 1.1
NECTIN1-203ENST00000341398 EEA1Q15075 1411 aa21.9■■□□□ 1.1
NECTIN1-203ENST00000341398 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
NECTIN1-203ENST00000341398 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
NECTIN1-203ENST00000341398 ADGRL1O94910 1474 aa21.83■■□□□ 1.09
NECTIN1-203ENST00000341398 ATP10BO94823 1461 aa21.83■■□□□ 1.08
NECTIN1-203ENST00000341398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
NECTIN1-203ENST00000341398 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
NECTIN1-203ENST00000341398 SAMD9Q5K651 1589 aa21.81■■□□□ 1.08
NECTIN1-203ENST00000341398 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
NECTIN1-203ENST00000341398 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
NECTIN1-203ENST00000341398 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
NECTIN1-203ENST00000341398 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
NECTIN1-203ENST00000341398 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
NECTIN1-203ENST00000341398 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
NECTIN1-203ENST00000341398 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
NECTIN1-203ENST00000341398 FHOD3Q2V2M9 1422 aa21.68■■□□□ 1.06
NECTIN1-203ENST00000341398 KIF21BO75037 1637 aa21.67■■□□□ 1.06
NECTIN1-203ENST00000341398 NUP153P49790 1475 aaKnown RBP21.66■■□□□ 1.06
NECTIN1-203ENST00000341398 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
NECTIN1-203ENST00000341398 NEO1Q92859 1461 aa21.64■■□□□ 1.06
NECTIN1-203ENST00000341398 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
NECTIN1-203ENST00000341398 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
NECTIN1-203ENST00000341398 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
NECTIN1-203ENST00000341398 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
NECTIN1-203ENST00000341398 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
NECTIN1-203ENST00000341398 CFAP74Q9C0B2 1584 aa21.51■■□□□ 1.03
NECTIN1-203ENST00000341398 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
NECTIN1-203ENST00000341398 DENND4BO75064 1496 aaPredicted RBP21.5■■□□□ 1.03
NECTIN1-203ENST00000341398 FMN1Q68DA7 1419 aa21.5■■□□□ 1.03
NECTIN1-203ENST00000341398 AKNAQ7Z591 1439 aa21.5■■□□□ 1.03
NECTIN1-203ENST00000341398 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
NECTIN1-203ENST00000341398 FANCAO15360 1455 aa21.49■■□□□ 1.03
NECTIN1-203ENST00000341398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.48■■□□□ 1.03
NECTIN1-203ENST00000341398 ADAMTSL3P82987 1691 aa21.44■■□□□ 1.02
NECTIN1-203ENST00000341398 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
NECTIN1-203ENST00000341398 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
NECTIN1-203ENST00000341398 FBXO41Q8TF61 875 aa21.43■■□□□ 1.02
NECTIN1-203ENST00000341398 HECW1Q76N89 1606 aa21.43■■□□□ 1.02
NECTIN1-203ENST00000341398 RICTORQ6R327 1708 aa21.42■■□□□ 1.02
NECTIN1-203ENST00000341398 TTC37Q6PGP7 1564 aa21.42■■□□□ 1.02
NECTIN1-203ENST00000341398 BCORL1Q5H9F3 1711 aa21.41■■□□□ 1.02
NECTIN1-203ENST00000341398 PTPRMP28827 1452 aa21.41■■□□□ 1.02
NECTIN1-203ENST00000341398 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
NECTIN1-203ENST00000341398 PLCH2O75038 1416 aa21.39■■□□□ 1.01
NECTIN1-203ENST00000341398 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
NECTIN1-203ENST00000341398 ARHGEF40Q8TER5 1519 aa21.37■■□□□ 1.01
NECTIN1-203ENST00000341398 POGZQ7Z3K3 1410 aa21.37■■□□□ 1.01
NECTIN1-203ENST00000341398 MAGI2Q86UL8 1455 aa21.36■■□□□ 1.01
NECTIN1-203ENST00000341398 SCAPERQ9BY12 1400 aa21.35■■□□□ 1.01
NECTIN1-203ENST00000341398 ZMYM4Q5VZL5 1548 aa21.34■■□□□ 1.01
NECTIN1-203ENST00000341398 MYO5CQ9NQX4 1742 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms