RNA–Protein interactions for RNA: ENST00000340592.9

GRIA1-202, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA1, Length 3,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-202ENST00000340592 ERICH3Q5RHP9 1530 aa14□□□□□ -0.17
GRIA1-202ENST00000340592 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
GRIA1-202ENST00000340592 FHAD1B1AJZ9 1412 aa13.99□□□□□ -0.17
GRIA1-202ENST00000340592 ARID3CA6NKF2 412 aa13.98□□□□□ -0.17
GRIA1-202ENST00000340592 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
GRIA1-202ENST00000340592 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
GRIA1-202ENST00000340592 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
GRIA1-202ENST00000340592 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
GRIA1-202ENST00000340592 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
GRIA1-202ENST00000340592 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
GRIA1-202ENST00000340592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
GRIA1-202ENST00000340592 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
GRIA1-202ENST00000340592 CUL7Q14999 1698 aa13.9□□□□□ -0.18
GRIA1-202ENST00000340592 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
GRIA1-202ENST00000340592 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
GRIA1-202ENST00000340592 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
GRIA1-202ENST00000340592 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
GRIA1-202ENST00000340592 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
GRIA1-202ENST00000340592 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
GRIA1-202ENST00000340592 GRIN2AQ12879 1464 aa13.86□□□□□ -0.19
GRIA1-202ENST00000340592 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
GRIA1-202ENST00000340592 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
GRIA1-202ENST00000340592 KANK4Q5T7N3 995 aaPredicted RBP13.82□□□□□ -0.2
GRIA1-202ENST00000340592 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
GRIA1-202ENST00000340592 ITGAEP38570 1179 aa13.77□□□□□ -0.2
GRIA1-202ENST00000340592 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
GRIA1-202ENST00000340592 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
GRIA1-202ENST00000340592 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
GRIA1-202ENST00000340592 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
GRIA1-202ENST00000340592 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
GRIA1-202ENST00000340592 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
GRIA1-202ENST00000340592 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
GRIA1-202ENST00000340592 NUP160Q12769 1436 aa13.7□□□□□ -0.22
GRIA1-202ENST00000340592 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
GRIA1-202ENST00000340592 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
GRIA1-202ENST00000340592 FAM50AQ14320 339 aaKnown RBP13.69□□□□□ -0.22
GRIA1-202ENST00000340592 PTPRGP23470 1445 aa13.65□□□□□ -0.22
GRIA1-202ENST00000340592 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
GRIA1-202ENST00000340592 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
GRIA1-202ENST00000340592 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
GRIA1-202ENST00000340592 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
GRIA1-202ENST00000340592 UGGT2Q9NYU1 1516 aa13.62□□□□□ -0.23
GRIA1-202ENST00000340592 CHD1O14646 1710 aa13.61□□□□□ -0.23
GRIA1-202ENST00000340592 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
GRIA1-202ENST00000340592 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
GRIA1-202ENST00000340592 PLEKHD1A6NEE1 506 aa13.59□□□□□ -0.23
GRIA1-202ENST00000340592 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
GRIA1-202ENST00000340592 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
GRIA1-202ENST00000340592 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
GRIA1-202ENST00000340592 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
GRIA1-202ENST00000340592 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
GRIA1-202ENST00000340592 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
GRIA1-202ENST00000340592 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
GRIA1-202ENST00000340592 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
GRIA1-202ENST00000340592 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
GRIA1-202ENST00000340592 PHLDB1Q86UU1 1377 aa13.54□□□□□ -0.24
GRIA1-202ENST00000340592 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
GRIA1-202ENST00000340592 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.24
GRIA1-202ENST00000340592 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
GRIA1-202ENST00000340592 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.25
GRIA1-202ENST00000340592 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
GRIA1-202ENST00000340592 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
GRIA1-202ENST00000340592 NUP153P49790 1475 aaKnown RBP13.49□□□□□ -0.25
GRIA1-202ENST00000340592 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
GRIA1-202ENST00000340592 HECW1Q76N89 1606 aa13.47□□□□□ -0.25
GRIA1-202ENST00000340592 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
GRIA1-202ENST00000340592 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
GRIA1-202ENST00000340592 NCOA2Q15596 1464 aa13.45□□□□□ -0.26
GRIA1-202ENST00000340592 RAPGEF6Q8TEU7 1601 aa13.44□□□□□ -0.26
GRIA1-202ENST00000340592 MAP3K1Q13233 1512 aa13.43□□□□□ -0.26
GRIA1-202ENST00000340592 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
GRIA1-202ENST00000340592 ATP10BO94823 1461 aa13.42□□□□□ -0.26
GRIA1-202ENST00000340592 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
GRIA1-202ENST00000340592 HRCP23327 699 aa13.42□□□□□ -0.26
GRIA1-202ENST00000340592 RRP7BPQ9NSQ0 103 aa13.4□□□□□ -0.26
GRIA1-202ENST00000340592 MAGI3Q5TCQ9 1506 aa13.4□□□□□ -0.26
GRIA1-202ENST00000340592 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
GRIA1-202ENST00000340592 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
GRIA1-202ENST00000340592 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
GRIA1-202ENST00000340592 MYOM3Q5VTT5 1437 aa13.38□□□□□ -0.27
GRIA1-202ENST00000340592 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
GRIA1-202ENST00000340592 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
GRIA1-202ENST00000340592 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
GRIA1-202ENST00000340592 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
GRIA1-202ENST00000340592 ABCA8O94911 1581 aa13.35□□□□□ -0.27
GRIA1-202ENST00000340592 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
GRIA1-202ENST00000340592 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
GRIA1-202ENST00000340592 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.28
GRIA1-202ENST00000340592 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
GRIA1-202ENST00000340592 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
GRIA1-202ENST00000340592 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
GRIA1-202ENST00000340592 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
GRIA1-202ENST00000340592 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
GRIA1-202ENST00000340592 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
GRIA1-202ENST00000340592 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
GRIA1-202ENST00000340592 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
GRIA1-202ENST00000340592 EFCAB2Q5VUJ9 269 aa13.27□□□□□ -0.29
GRIA1-202ENST00000340592 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
GRIA1-202ENST00000340592 KIF14Q15058 1648 aa13.26□□□□□ -0.29
GRIA1-202ENST00000340592 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms