RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MLECQ14165 292 aa18.02■□□□□ 0.48
LIN54-201ENST00000340417 NEFMP07197 916 aa17.98■□□□□ 0.47
LIN54-201ENST00000340417 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
LIN54-201ENST00000340417 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
LIN54-201ENST00000340417 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
LIN54-201ENST00000340417 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
LIN54-201ENST00000340417 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
LIN54-201ENST00000340417 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
LIN54-201ENST00000340417 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
LIN54-201ENST00000340417 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
LIN54-201ENST00000340417 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
LIN54-201ENST00000340417 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
LIN54-201ENST00000340417 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
LIN54-201ENST00000340417 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
LIN54-201ENST00000340417 A0A0G2JS52 829 aa17.8■□□□□ 0.44
LIN54-201ENST00000340417 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
LIN54-201ENST00000340417 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
LIN54-201ENST00000340417 ZBTB7CA1YPR0 619 aa17.79■□□□□ 0.44
LIN54-201ENST00000340417 HRCP23327 699 aa17.77■□□□□ 0.44
LIN54-201ENST00000340417 GGT6Q6P531 493 aa17.75■□□□□ 0.43
LIN54-201ENST00000340417 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
LIN54-201ENST00000340417 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
LIN54-201ENST00000340417 KANK1Q14678 1352 aa17.73■□□□□ 0.43
LIN54-201ENST00000340417 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
LIN54-201ENST00000340417 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.43
LIN54-201ENST00000340417 ANP32CO43423 234 aa17.7■□□□□ 0.42
LIN54-201ENST00000340417 PTPRGP23470 1445 aa17.68■□□□□ 0.42
LIN54-201ENST00000340417 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
LIN54-201ENST00000340417 NESP48681 1621 aa17.68■□□□□ 0.42
LIN54-201ENST00000340417 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
LIN54-201ENST00000340417 FAM69CQ0P6D2 419 aa17.66■□□□□ 0.42
LIN54-201ENST00000340417 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
LIN54-201ENST00000340417 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
LIN54-201ENST00000340417 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
LIN54-201ENST00000340417 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.41
LIN54-201ENST00000340417 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIN54-201ENST00000340417 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
LIN54-201ENST00000340417 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
LIN54-201ENST00000340417 FMN1Q68DA7 1419 aa17.61■□□□□ 0.41
LIN54-201ENST00000340417 ZBTB47Q9UFB7 747 aaPredicted RBP17.6■□□□□ 0.41
LIN54-201ENST00000340417 POGKQ9P215 609 aa17.6■□□□□ 0.41
LIN54-201ENST00000340417 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
LIN54-201ENST00000340417 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
LIN54-201ENST00000340417 MYT1Q01538 1121 aa17.56■□□□□ 0.4
LIN54-201ENST00000340417 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
LIN54-201ENST00000340417 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
LIN54-201ENST00000340417 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
LIN54-201ENST00000340417 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.39
LIN54-201ENST00000340417 IFT140Q96RY7 1462 aa17.52■□□□□ 0.39
LIN54-201ENST00000340417 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
LIN54-201ENST00000340417 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
LIN54-201ENST00000340417 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
LIN54-201ENST00000340417 KIF3BO15066 747 aa17.5■□□□□ 0.39
LIN54-201ENST00000340417 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
LIN54-201ENST00000340417 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
LIN54-201ENST00000340417 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
LIN54-201ENST00000340417 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
LIN54-201ENST00000340417 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
LIN54-201ENST00000340417 CFTRP13569 1480 aa17.46■□□□□ 0.39
LIN54-201ENST00000340417 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
LIN54-201ENST00000340417 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
LIN54-201ENST00000340417 CCDC18Q5T9S5 1454 aa17.41■□□□□ 0.38
LIN54-201ENST00000340417 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
LIN54-201ENST00000340417 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
LIN54-201ENST00000340417 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
LIN54-201ENST00000340417 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
LIN54-201ENST00000340417 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
LIN54-201ENST00000340417 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
LIN54-201ENST00000340417 IGF1RP08069 1367 aa17.35■□□□□ 0.37
LIN54-201ENST00000340417 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
LIN54-201ENST00000340417 STK26Q9P289 416 aa17.35■□□□□ 0.37
LIN54-201ENST00000340417 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
LIN54-201ENST00000340417 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
LIN54-201ENST00000340417 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
LIN54-201ENST00000340417 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIN54-201ENST00000340417 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
LIN54-201ENST00000340417 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
LIN54-201ENST00000340417 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
LIN54-201ENST00000340417 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
LIN54-201ENST00000340417 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
LIN54-201ENST00000340417 ARXQ96QS3 562 aa17.29■□□□□ 0.36
LIN54-201ENST00000340417 PKD2Q13563 968 aa17.29■□□□□ 0.36
LIN54-201ENST00000340417 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
LIN54-201ENST00000340417 NUP155O75694 1391 aa17.28■□□□□ 0.36
LIN54-201ENST00000340417 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.35
LIN54-201ENST00000340417 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
LIN54-201ENST00000340417 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
LIN54-201ENST00000340417 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
LIN54-201ENST00000340417 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
LIN54-201ENST00000340417 SOX12O15370 315 aa17.24■□□□□ 0.35
LIN54-201ENST00000340417 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
LIN54-201ENST00000340417 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
LIN54-201ENST00000340417 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
LIN54-201ENST00000340417 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
LIN54-201ENST00000340417 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
LIN54-201ENST00000340417 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
LIN54-201ENST00000340417 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
LIN54-201ENST00000340417 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
LIN54-201ENST00000340417 NPHP1O15259 732 aa17.19■□□□□ 0.34
LIN54-201ENST00000340417 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms