RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
NUP43-201ENST00000340413 CLIP1P30622 1438 aa11.48□□□□□ -0.57
NUP43-201ENST00000340413 VPS8Q8N3P4 1428 aa11.46□□□□□ -0.58
NUP43-201ENST00000340413 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
NUP43-201ENST00000340413 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
NUP43-201ENST00000340413 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
NUP43-201ENST00000340413 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
NUP43-201ENST00000340413 ARHGAP35Q9NRY4 1499 aa11.43□□□□□ -0.58
NUP43-201ENST00000340413 CHD1O14646 1710 aa11.43□□□□□ -0.58
NUP43-201ENST00000340413 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
NUP43-201ENST00000340413 CFAP43Q8NDM7 1665 aa11.41□□□□□ -0.58
NUP43-201ENST00000340413 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
NUP43-201ENST00000340413 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
NUP43-201ENST00000340413 KIAA0556O60303 1618 aa11.4□□□□□ -0.59
NUP43-201ENST00000340413 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
NUP43-201ENST00000340413 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
NUP43-201ENST00000340413 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
NUP43-201ENST00000340413 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
NUP43-201ENST00000340413 CCDC18Q5T9S5 1454 aa11.33□□□□□ -0.6
NUP43-201ENST00000340413 DISP1Q96F81 1524 aa11.33□□□□□ -0.6
NUP43-201ENST00000340413 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
NUP43-201ENST00000340413 TIAM1Q13009 1591 aa11.31□□□□□ -0.6
NUP43-201ENST00000340413 PCF11O94913 1555 aaKnown RBP11.3□□□□□ -0.6
NUP43-201ENST00000340413 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
NUP43-201ENST00000340413 RAPGEF6Q8TEU7 1601 aa11.27□□□□□ -0.6
NUP43-201ENST00000340413 ABCA8O94911 1581 aa11.26□□□□□ -0.61
NUP43-201ENST00000340413 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
NUP43-201ENST00000340413 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
NUP43-201ENST00000340413 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
NUP43-201ENST00000340413 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
NUP43-201ENST00000340413 FHOD3Q2V2M9 1422 aa11.22□□□□□ -0.61
NUP43-201ENST00000340413 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
NUP43-201ENST00000340413 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
NUP43-201ENST00000340413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
NUP43-201ENST00000340413 SUPT6HQ7KZ85 1726 aaKnown RBP11.19□□□□□ -0.62
NUP43-201ENST00000340413 EPRSP07814 1512 aaKnown RBP11.17□□□□□ -0.62
NUP43-201ENST00000340413 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
NUP43-201ENST00000340413 PRG4Q92954 1404 aaPredicted RBP11.16□□□□□ -0.62
NUP43-201ENST00000340413 ABCC2Q92887 1545 aa11.16□□□□□ -0.62
NUP43-201ENST00000340413 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
NUP43-201ENST00000340413 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.62
NUP43-201ENST00000340413 APLP2Q06481 763 aa11.15□□□□□ -0.62
NUP43-201ENST00000340413 NUP153P49790 1475 aaKnown RBP11.14□□□□□ -0.63
NUP43-201ENST00000340413 ITSN2Q9NZM3 1697 aa11.13□□□□□ -0.63
NUP43-201ENST00000340413 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
NUP43-201ENST00000340413 PTPRGP23470 1445 aa11.1□□□□□ -0.63
NUP43-201ENST00000340413 KDM5BQ9UGL1 1544 aa11.1□□□□□ -0.63
NUP43-201ENST00000340413 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
NUP43-201ENST00000340413 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
NUP43-201ENST00000340413 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
NUP43-201ENST00000340413 TROQ12816 1431 aaPredicted RBP11.08□□□□□ -0.64
NUP43-201ENST00000340413 KIF14Q15058 1648 aa11.08□□□□□ -0.64
NUP43-201ENST00000340413 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
NUP43-201ENST00000340413 CDK11AQ9UQ88 783 aaPredicted RBP11.06□□□□□ -0.64
NUP43-201ENST00000340413 ZCCHC11Q5TAX3 1644 aaKnown RBP11.05□□□□□ -0.64
NUP43-201ENST00000340413 ACIN1Q9UKV3 1341 aaKnown RBP11.05□□□□□ -0.64
NUP43-201ENST00000340413 FBLN2P98095 1184 aa11.05□□□□□ -0.64
NUP43-201ENST00000340413 MAGI3Q5TCQ9 1506 aa11.05□□□□□ -0.64
NUP43-201ENST00000340413 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
NUP43-201ENST00000340413 ATP10BO94823 1461 aa11.04□□□□□ -0.64
NUP43-201ENST00000340413 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
NUP43-201ENST00000340413 PLB1Q6P1J6 1458 aa11.04□□□□□ -0.64
NUP43-201ENST00000340413 ERCC6L2Q5T890 1561 aa11.04□□□□□ -0.64
NUP43-201ENST00000340413 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
NUP43-201ENST00000340413 AKNAQ7Z591 1439 aa11.02□□□□□ -0.64
NUP43-201ENST00000340413 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.65
NUP43-201ENST00000340413 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
NUP43-201ENST00000340413 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
NUP43-201ENST00000340413 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
NUP43-201ENST00000340413 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
NUP43-201ENST00000340413 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
NUP43-201ENST00000340413 FGD6Q6ZV73 1430 aa11□□□□□ -0.65
NUP43-201ENST00000340413 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
NUP43-201ENST00000340413 CDC42BPAQ5VT25 1732 aa10.99□□□□□ -0.65
NUP43-201ENST00000340413 CROCC2H7BZ55 1655 aa10.99□□□□□ -0.65
NUP43-201ENST00000340413 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
NUP43-201ENST00000340413 MYO5CQ9NQX4 1742 aa10.98□□□□□ -0.65
NUP43-201ENST00000340413 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
NUP43-201ENST00000340413 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
NUP43-201ENST00000340413 DNMT1P26358 1616 aaKnown RBP10.97□□□□□ -0.65
NUP43-201ENST00000340413 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
NUP43-201ENST00000340413 ADGBQ8N7X0 1667 aa10.97□□□□□ -0.65
NUP43-201ENST00000340413 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 HRCP23327 699 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
NUP43-201ENST00000340413 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 RIMBP3CA6NJZ7 1639 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 RIMBP3BA6NNM3 1639 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 RIMBP3Q9UFD9 1639 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
NUP43-201ENST00000340413 GLI2P10070 1586 aa10.96□□□□□ -0.66
NUP43-201ENST00000340413 MAST1Q9Y2H9 1570 aa10.96□□□□□ -0.66
NUP43-201ENST00000340413 PHLDB1Q86UU1 1377 aa10.95□□□□□ -0.66
NUP43-201ENST00000340413 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
NUP43-201ENST00000340413 GPATCH8Q9UKJ3 1502 aaKnown RBP10.93□□□□□ -0.66
NUP43-201ENST00000340413 RANGAP1P46060 587 aaPredicted RBP10.92□□□□□ -0.66
NUP43-201ENST00000340413 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
NUP43-201ENST00000340413 ROCK1Q13464 1354 aa10.92□□□□□ -0.66
NUP43-201ENST00000340413 ADGRL2O95490 1459 aa10.92□□□□□ -0.66
NUP43-201ENST00000340413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms