RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
TRAF3IP2-201ENST00000340026 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
TRAF3IP2-201ENST00000340026 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
TRAF3IP2-201ENST00000340026 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
TRAF3IP2-201ENST00000340026 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
TRAF3IP2-201ENST00000340026 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP2-201ENST00000340026 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
TRAF3IP2-201ENST00000340026 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
TRAF3IP2-201ENST00000340026 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.17
TRAF3IP2-201ENST00000340026 MRC2Q9UBG0 1479 aa16.07■□□□□ 0.16
TRAF3IP2-201ENST00000340026 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
TRAF3IP2-201ENST00000340026 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
TRAF3IP2-201ENST00000340026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAF3IP2-201ENST00000340026 RANGAP1P46060 587 aaPredicted RBP16.04■□□□□ 0.16
TRAF3IP2-201ENST00000340026 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
TRAF3IP2-201ENST00000340026 WDR62O43379 1518 aa16.03■□□□□ 0.16
TRAF3IP2-201ENST00000340026 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
TRAF3IP2-201ENST00000340026 ADAMTS12P58397 1594 aa16■□□□□ 0.15
TRAF3IP2-201ENST00000340026 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
TRAF3IP2-201ENST00000340026 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
TRAF3IP2-201ENST00000340026 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
TRAF3IP2-201ENST00000340026 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
TRAF3IP2-201ENST00000340026 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
TRAF3IP2-201ENST00000340026 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
TRAF3IP2-201ENST00000340026 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
TRAF3IP2-201ENST00000340026 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
TRAF3IP2-201ENST00000340026 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
TRAF3IP2-201ENST00000340026 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
TRAF3IP2-201ENST00000340026 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
TRAF3IP2-201ENST00000340026 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
TRAF3IP2-201ENST00000340026 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
TRAF3IP2-201ENST00000340026 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
TRAF3IP2-201ENST00000340026 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
TRAF3IP2-201ENST00000340026 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
TRAF3IP2-201ENST00000340026 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
TRAF3IP2-201ENST00000340026 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
TRAF3IP2-201ENST00000340026 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
TRAF3IP2-201ENST00000340026 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
TRAF3IP2-201ENST00000340026 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
TRAF3IP2-201ENST00000340026 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
TRAF3IP2-201ENST00000340026 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
TRAF3IP2-201ENST00000340026 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
TRAF3IP2-201ENST00000340026 MYOM3Q5VTT5 1437 aa15.78■□□□□ 0.12
TRAF3IP2-201ENST00000340026 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
TRAF3IP2-201ENST00000340026 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
TRAF3IP2-201ENST00000340026 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
TRAF3IP2-201ENST00000340026 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
TRAF3IP2-201ENST00000340026 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
TRAF3IP2-201ENST00000340026 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
TRAF3IP2-201ENST00000340026 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
TRAF3IP2-201ENST00000340026 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
TRAF3IP2-201ENST00000340026 EPRSP07814 1512 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP2-201ENST00000340026 HFM1A2PYH4 1435 aa15.74■□□□□ 0.11
TRAF3IP2-201ENST00000340026 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
TRAF3IP2-201ENST00000340026 MAGI3Q5TCQ9 1506 aa15.73■□□□□ 0.11
TRAF3IP2-201ENST00000340026 DISP1Q96F81 1524 aa15.73■□□□□ 0.11
TRAF3IP2-201ENST00000340026 MIA2Q96PC5 1412 aa15.72■□□□□ 0.11
TRAF3IP2-201ENST00000340026 PTPN23Q9H3S7 1636 aa15.71■□□□□ 0.11
TRAF3IP2-201ENST00000340026 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
TRAF3IP2-201ENST00000340026 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
TRAF3IP2-201ENST00000340026 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
TRAF3IP2-201ENST00000340026 NUP160Q12769 1436 aa15.66■□□□□ 0.1
TRAF3IP2-201ENST00000340026 RAPGEF6Q8TEU7 1601 aa15.66■□□□□ 0.1
TRAF3IP2-201ENST00000340026 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
TRAF3IP2-201ENST00000340026 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
TRAF3IP2-201ENST00000340026 UACAQ9BZF9 1416 aa15.65■□□□□ 0.1
TRAF3IP2-201ENST00000340026 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
TRAF3IP2-201ENST00000340026 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
TRAF3IP2-201ENST00000340026 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
TRAF3IP2-201ENST00000340026 NAIPQ13075 1403 aa15.63■□□□□ 0.09
TRAF3IP2-201ENST00000340026 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
TRAF3IP2-201ENST00000340026 NUP153P49790 1475 aaKnown RBP15.61■□□□□ 0.09
TRAF3IP2-201ENST00000340026 ITGAEP38570 1179 aa15.6■□□□□ 0.09
TRAF3IP2-201ENST00000340026 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
TRAF3IP2-201ENST00000340026 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
TRAF3IP2-201ENST00000340026 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
TRAF3IP2-201ENST00000340026 DNMT1P26358 1616 aaKnown RBP15.55■□□□□ 0.08
TRAF3IP2-201ENST00000340026 ITSN2Q9NZM3 1697 aa15.55■□□□□ 0.08
TRAF3IP2-201ENST00000340026 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
TRAF3IP2-201ENST00000340026 TROQ12816 1431 aaPredicted RBP15.52■□□□□ 0.07
TRAF3IP2-201ENST00000340026 ABCA8O94911 1581 aa15.52■□□□□ 0.07
TRAF3IP2-201ENST00000340026 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
TRAF3IP2-201ENST00000340026 MIER1Q8N108 512 aa15.5■□□□□ 0.07
TRAF3IP2-201ENST00000340026 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
TRAF3IP2-201ENST00000340026 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
TRAF3IP2-201ENST00000340026 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
TRAF3IP2-201ENST00000340026 DAPK1P53355 1430 aa15.47■□□□□ 0.07
TRAF3IP2-201ENST00000340026 PPP1R15AO75807 674 aaPredicted RBP15.46■□□□□ 0.07
TRAF3IP2-201ENST00000340026 ADGBQ8N7X0 1667 aa15.45■□□□□ 0.06
TRAF3IP2-201ENST00000340026 CROCC2H7BZ55 1655 aa15.45■□□□□ 0.06
TRAF3IP2-201ENST00000340026 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
TRAF3IP2-201ENST00000340026 DENND4BO75064 1496 aaPredicted RBP15.45■□□□□ 0.06
TRAF3IP2-201ENST00000340026 ADGRL2O95490 1459 aa15.45■□□□□ 0.06
TRAF3IP2-201ENST00000340026 ABCC5O15440 1437 aa15.44■□□□□ 0.06
TRAF3IP2-201ENST00000340026 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
TRAF3IP2-201ENST00000340026 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
TRAF3IP2-201ENST00000340026 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
TRAF3IP2-201ENST00000340026 GPATCH8Q9UKJ3 1502 aaKnown RBP15.42■□□□□ 0.06
TRAF3IP2-201ENST00000340026 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
TRAF3IP2-201ENST00000340026 KDM6BO15054 1643 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms