RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 UBTFP17480 764 aaKnown RBP29.1■■■□□ 2.25
SDCBP2-201ENST00000339987 KIAA0586Q9BVV6 1533 aa29.09■■■□□ 2.25
SDCBP2-201ENST00000339987 LOC105371045A0A1W2PR82 267 aa29.08■■■□□ 2.25
SDCBP2-201ENST00000339987 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
SDCBP2-201ENST00000339987 CLASP1Q7Z460 1538 aa29.05■■■□□ 2.24
SDCBP2-201ENST00000339987 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
SDCBP2-201ENST00000339987 IQGAP2Q13576 1575 aa29.02■■■□□ 2.24
SDCBP2-201ENST00000339987 SHROOM2Q13796 1616 aa28.92■■■□□ 2.22
SDCBP2-201ENST00000339987 UGGT2Q9NYU1 1516 aa28.91■■■□□ 2.22
SDCBP2-201ENST00000339987 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
SDCBP2-201ENST00000339987 CEP162Q5TB80 1403 aa28.8■■■□□ 2.2
SDCBP2-201ENST00000339987 EFCAB5A4FU69 1503 aa28.79■■■□□ 2.2
SDCBP2-201ENST00000339987 SAMD9Q5K651 1589 aa28.78■■■□□ 2.2
SDCBP2-201ENST00000339987 PRG4Q92954 1404 aaPredicted RBP28.78■■■□□ 2.2
SDCBP2-201ENST00000339987 CLIP1P30622 1438 aa28.76■■■□□ 2.2
SDCBP2-201ENST00000339987 DISP1Q96F81 1524 aa28.76■■■□□ 2.2
SDCBP2-201ENST00000339987 CARMIL2Q6F5E8 1435 aa28.75■■■□□ 2.19
SDCBP2-201ENST00000339987 KIAA0556O60303 1618 aa28.74■■■□□ 2.19
SDCBP2-201ENST00000339987 RANGAP1P46060 587 aaPredicted RBP28.74■■■□□ 2.19
SDCBP2-201ENST00000339987 ARHGAP35Q9NRY4 1499 aa28.72■■■□□ 2.19
SDCBP2-201ENST00000339987 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
SDCBP2-201ENST00000339987 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
SDCBP2-201ENST00000339987 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
SDCBP2-201ENST00000339987 FHOD3Q2V2M9 1422 aa28.6■■■□□ 2.17
SDCBP2-201ENST00000339987 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
SDCBP2-201ENST00000339987 RIMBP3CA6NJZ7 1639 aa28.55■■■□□ 2.16
SDCBP2-201ENST00000339987 RIMBP3BA6NNM3 1639 aa28.55■■■□□ 2.16
SDCBP2-201ENST00000339987 RIMBP3Q9UFD9 1639 aa28.55■■■□□ 2.16
SDCBP2-201ENST00000339987 PTPRGP23470 1445 aa28.52■■■□□ 2.16
SDCBP2-201ENST00000339987 FMN1Q68DA7 1419 aa28.5■■■□□ 2.15
SDCBP2-201ENST00000339987 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
SDCBP2-201ENST00000339987 TTBK1Q5TCY1 1321 aaPredicted RBP28.41■■■□□ 2.14
SDCBP2-201ENST00000339987 ABCA8O94911 1581 aa28.39■■■□□ 2.14
SDCBP2-201ENST00000339987 PLB1Q6P1J6 1458 aa28.37■■■□□ 2.13
SDCBP2-201ENST00000339987 UACAQ9BZF9 1416 aa28.36■■■□□ 2.13
SDCBP2-201ENST00000339987 RAPGEF6Q8TEU7 1601 aa28.36■■■□□ 2.13
SDCBP2-201ENST00000339987 CASKIN1Q8WXD9 1431 aa28.36■■■□□ 2.13
SDCBP2-201ENST00000339987 PCF11O94913 1555 aaKnown RBP28.34■■■□□ 2.13
SDCBP2-201ENST00000339987 UHRF1BP1LA0JNW5 1464 aa28.33■■■□□ 2.13
SDCBP2-201ENST00000339987 FYCO1Q9BQS8 1478 aa28.32■■■□□ 2.12
SDCBP2-201ENST00000339987 ABCC2Q92887 1545 aa28.31■■■□□ 2.12
SDCBP2-201ENST00000339987 HECW1Q76N89 1606 aa28.29■■■□□ 2.12
SDCBP2-201ENST00000339987 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
SDCBP2-201ENST00000339987 NUP153P49790 1475 aaKnown RBP28.26■■■□□ 2.11
SDCBP2-201ENST00000339987 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.11
SDCBP2-201ENST00000339987 EPRSP07814 1512 aaKnown RBP28.18■■■□□ 2.1
SDCBP2-201ENST00000339987 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
SDCBP2-201ENST00000339987 ATP1B4Q9UN42 357 aaPredicted RBP28.18■■■□□ 2.1
SDCBP2-201ENST00000339987 KDM5BQ9UGL1 1544 aa28.17■■■□□ 2.1
SDCBP2-201ENST00000339987 LRRIQ1Q96JM4 1722 aa28.16■■■□□ 2.1
SDCBP2-201ENST00000339987 ATP10BO94823 1461 aa28.14■■■□□ 2.1
SDCBP2-201ENST00000339987 MAP3K1Q13233 1512 aa28.13■■■□□ 2.09
SDCBP2-201ENST00000339987 ZCCHC11Q5TAX3 1644 aaKnown RBP28.11■■■□□ 2.09
SDCBP2-201ENST00000339987 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
SDCBP2-201ENST00000339987 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
SDCBP2-201ENST00000339987 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
SDCBP2-201ENST00000339987 ARID3CA6NKF2 412 aa28.07■■■□□ 2.08
SDCBP2-201ENST00000339987 NPM1P06748 294 aaKnown RBP eCLIP28.07■■■□□ 2.08
SDCBP2-201ENST00000339987 APLP2Q06481 763 aa28.05■■■□□ 2.08
SDCBP2-201ENST00000339987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.01■■■□□ 2.08
SDCBP2-201ENST00000339987 HNRNPUL2Q1KMD3 747 aaKnown RBP28.01■■■□□ 2.08
SDCBP2-201ENST00000339987 CDK11AQ9UQ88 783 aaPredicted RBP28■■■□□ 2.07
SDCBP2-201ENST00000339987 MAPKBP1O60336 1514 aa27.98■■■□□ 2.07
SDCBP2-201ENST00000339987 MAGI3Q5TCQ9 1506 aa27.95■■■□□ 2.06
SDCBP2-201ENST00000339987 PLEKHD1A6NEE1 506 aa27.94■■■□□ 2.06
SDCBP2-201ENST00000339987 ASXL2Q76L83 1435 aa27.94■■■□□ 2.06
SDCBP2-201ENST00000339987 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
SDCBP2-201ENST00000339987 EHBP1L1Q8N3D4 1523 aa27.93■■■□□ 2.06
SDCBP2-201ENST00000339987 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
SDCBP2-201ENST00000339987 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
SDCBP2-201ENST00000339987 WDR7Q9Y4E6 1490 aa27.91■■■□□ 2.06
SDCBP2-201ENST00000339987 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.06
SDCBP2-201ENST00000339987 KIF14Q15058 1648 aa27.81■■■□□ 2.04
SDCBP2-201ENST00000339987 SUPT6HQ7KZ85 1726 aaKnown RBP27.79■■■□□ 2.04
SDCBP2-201ENST00000339987 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
SDCBP2-201ENST00000339987 NCOA2Q15596 1464 aa27.74■■■□□ 2.03
SDCBP2-201ENST00000339987 ABCC10Q5T3U5 1492 aa27.74■■■□□ 2.03
SDCBP2-201ENST00000339987 GLI2P10070 1586 aa27.73■■■□□ 2.03
SDCBP2-201ENST00000339987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
SDCBP2-201ENST00000339987 DIP2BQ9P265 1576 aa27.72■■■□□ 2.03
SDCBP2-201ENST00000339987 PPARGC1BQ86YN6 1023 aaKnown RBP27.72■■■□□ 2.03
SDCBP2-201ENST00000339987 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
SDCBP2-201ENST00000339987 TTC37Q6PGP7 1564 aa27.68■■■□□ 2.02
SDCBP2-201ENST00000339987 CCNB3Q8WWL7 1395 aa27.64■■■□□ 2.01
SDCBP2-201ENST00000339987 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
SDCBP2-201ENST00000339987 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
SDCBP2-201ENST00000339987 PHLDB1Q86UU1 1377 aa27.61■■■□□ 2.01
SDCBP2-201ENST00000339987 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 MAP3K4Q9Y6R4 1608 aa27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 GPATCH8Q9UKJ3 1502 aaKnown RBP27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 CDC42BPAQ5VT25 1732 aa27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 ITSN2Q9NZM3 1697 aa27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
SDCBP2-201ENST00000339987 PREX2Q70Z35 1606 aa27.58■■■□□ 2.01
SDCBP2-201ENST00000339987 ARAP3Q8WWN8 1544 aa27.58■■■□□ 2.01
SDCBP2-201ENST00000339987 PLCH2O75038 1416 aa27.57■■■□□ 2
SDCBP2-201ENST00000339987 CD109Q6YHK3 1445 aa27.57■■■□□ 2
SDCBP2-201ENST00000339987 MIA2Q96PC5 1412 aa27.53■■■□□ 2
SDCBP2-201ENST00000339987 CDC42BPBQ9Y5S2 1711 aa27.52■■■□□ 2
SDCBP2-201ENST00000339987 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms