RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 CLSPNQ9HAW4 1339 aa15.41■□□□□ 0.06
SEMA4D-201ENST00000339861 CARMIL1Q5VZK9 1371 aa15.39■□□□□ 0.05
SEMA4D-201ENST00000339861 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-201ENST00000339861 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
SEMA4D-201ENST00000339861 KIF21BO75037 1637 aa15.33■□□□□ 0.05
SEMA4D-201ENST00000339861 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-201ENST00000339861 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
SEMA4D-201ENST00000339861 FOXD1Q16676 465 aa15.3■□□□□ 0.04
SEMA4D-201ENST00000339861 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
SEMA4D-201ENST00000339861 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
SEMA4D-201ENST00000339861 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
SEMA4D-201ENST00000339861 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
SEMA4D-201ENST00000339861 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
SEMA4D-201ENST00000339861 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEMA4D-201ENST00000339861 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
SEMA4D-201ENST00000339861 PPP1R15AO75807 674 aaPredicted RBP15.22■□□□□ 0.03
SEMA4D-201ENST00000339861 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-201ENST00000339861 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-201ENST00000339861 ANP32EQ9BTT0 268 aa15.19■□□□□ 0.02
SEMA4D-201ENST00000339861 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
SEMA4D-201ENST00000339861 IGF1RP08069 1367 aa15.17■□□□□ 0.02
SEMA4D-201ENST00000339861 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
SEMA4D-201ENST00000339861 PHLDB1Q86UU1 1377 aa15.17■□□□□ 0.02
SEMA4D-201ENST00000339861 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
SEMA4D-201ENST00000339861 RBM19Q9Y4C8 960 aaKnown RBP15.15■□□□□ 0.02
SEMA4D-201ENST00000339861 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
SEMA4D-201ENST00000339861 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
SEMA4D-201ENST00000339861 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
SEMA4D-201ENST00000339861 NBR1Q14596 966 aa15.12■□□□□ 0.01
SEMA4D-201ENST00000339861 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
SEMA4D-201ENST00000339861 TMC1Q8TDI8 760 aa15.11■□□□□ 0.01
SEMA4D-201ENST00000339861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEMA4D-201ENST00000339861 PRXQ9BXM0 1461 aa15.1■□□□□ 0.01
SEMA4D-201ENST00000339861 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
SEMA4D-201ENST00000339861 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
SEMA4D-201ENST00000339861 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
SEMA4D-201ENST00000339861 CCER2I3L3R5 266 aa15.08■□□□□ 0
SEMA4D-201ENST00000339861 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
SEMA4D-201ENST00000339861 RGL3Q3MIN7 710 aa15.06■□□□□ 0
SEMA4D-201ENST00000339861 TIMELESSQ9UNS1 1208 aa15.05■□□□□ 0
SEMA4D-201ENST00000339861 CUX1P39880 1505 aa15.05■□□□□ -0
SEMA4D-201ENST00000339861 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
SEMA4D-201ENST00000339861 DAXXQ9UER7 740 aaPredicted RBP15.05■□□□□ -0
SEMA4D-201ENST00000339861 RRBP1Q9P2E9 1410 aaKnown RBP15.05■□□□□ -0
SEMA4D-201ENST00000339861 FGD5Q6ZNL6 1462 aa15.04■□□□□ -0
SEMA4D-201ENST00000339861 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
SEMA4D-201ENST00000339861 MPHOSPH9Q99550 1183 aa15.03■□□□□ -0
SEMA4D-201ENST00000339861 TOP2BQ02880 1626 aa15.03■□□□□ -0
SEMA4D-201ENST00000339861 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
SEMA4D-201ENST00000339861 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
SEMA4D-201ENST00000339861 LRRC9Q6ZRR7 1453 aa15□□□□□ -0.01
SEMA4D-201ENST00000339861 ANP32AP39687 249 aaKnown RBP15□□□□□ -0.01
SEMA4D-201ENST00000339861 TSPY4P0CV99 314 aa14.98□□□□□ -0.01
SEMA4D-201ENST00000339861 TSPY10P0CW01 314 aa14.98□□□□□ -0.01
SEMA4D-201ENST00000339861 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
SEMA4D-201ENST00000339861 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
SEMA4D-201ENST00000339861 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
SEMA4D-201ENST00000339861 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
SEMA4D-201ENST00000339861 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
SEMA4D-201ENST00000339861 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
SEMA4D-201ENST00000339861 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
SEMA4D-201ENST00000339861 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
SEMA4D-201ENST00000339861 CFTRP13569 1480 aa14.93□□□□□ -0.02
SEMA4D-201ENST00000339861 PKD2Q13563 968 aa14.91□□□□□ -0.02
SEMA4D-201ENST00000339861 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-201ENST00000339861 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-201ENST00000339861 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
SEMA4D-201ENST00000339861 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
SEMA4D-201ENST00000339861 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
SEMA4D-201ENST00000339861 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
SEMA4D-201ENST00000339861 WASHC2AQ641Q2 1341 aa14.88□□□□□ -0.03
SEMA4D-201ENST00000339861 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-201ENST00000339861 NESP48681 1621 aa14.87□□□□□ -0.03
SEMA4D-201ENST00000339861 CC2D1BQ5T0F9 858 aaKnown RBP14.86□□□□□ -0.03
SEMA4D-201ENST00000339861 PRKRIP1Q9H875 184 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-201ENST00000339861 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
SEMA4D-201ENST00000339861 TIAM1Q13009 1591 aa14.85□□□□□ -0.03
SEMA4D-201ENST00000339861 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
SEMA4D-201ENST00000339861 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
SEMA4D-201ENST00000339861 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
SEMA4D-201ENST00000339861 CANXP27824 592 aaKnown RBP14.81□□□□□ -0.04
SEMA4D-201ENST00000339861 UACAQ9BZF9 1416 aa14.79□□□□□ -0.04
SEMA4D-201ENST00000339861 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-201ENST00000339861 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
SEMA4D-201ENST00000339861 CASKIN1Q8WXD9 1431 aa14.78□□□□□ -0.04
SEMA4D-201ENST00000339861 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
SEMA4D-201ENST00000339861 NBPF8Q3BBV2 869 aa14.77□□□□□ -0.04
SEMA4D-201ENST00000339861 C11orf95C9JLR9 678 aaPredicted RBP14.77□□□□□ -0.05
SEMA4D-201ENST00000339861 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
SEMA4D-201ENST00000339861 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
SEMA4D-201ENST00000339861 NUP155O75694 1391 aa14.76□□□□□ -0.05
SEMA4D-201ENST00000339861 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
SEMA4D-201ENST00000339861 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
SEMA4D-201ENST00000339861 WDR43Q15061 677 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEMA4D-201ENST00000339861 KIF7Q2M1P5 1343 aa14.75□□□□□ -0.05
SEMA4D-201ENST00000339861 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
SEMA4D-201ENST00000339861 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
SEMA4D-201ENST00000339861 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-201ENST00000339861 POLA1P09884 1462 aaPredicted RBP14.73□□□□□ -0.05
SEMA4D-201ENST00000339861 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms