RNA–Protein interactions for RNA: ENST00000339566.7

STAMBP-201, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene STAMBP, Length 6,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-201ENST00000339566 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
STAMBP-201ENST00000339566 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
STAMBP-201ENST00000339566 TRIM44Q96DX7 344 aaPredicted RBP10.85□□□□□ -0.67
STAMBP-201ENST00000339566 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
STAMBP-201ENST00000339566 ARID3CA6NKF2 412 aa10.84□□□□□ -0.67
STAMBP-201ENST00000339566 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
STAMBP-201ENST00000339566 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
STAMBP-201ENST00000339566 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
STAMBP-201ENST00000339566 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
STAMBP-201ENST00000339566 BECN1Q14457 450 aa10.82□□□□□ -0.68
STAMBP-201ENST00000339566 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
STAMBP-201ENST00000339566 IPO9Q96P70 1041 aaKnown RBP10.79□□□□□ -0.68
STAMBP-201ENST00000339566 FANCIQ9NVI1 1328 aa10.79□□□□□ -0.68
STAMBP-201ENST00000339566 ANO8Q9HCE9 1232 aaPredicted RBP10.78□□□□□ -0.68
STAMBP-201ENST00000339566 RGS3P49796 1198 aa10.77□□□□□ -0.69
STAMBP-201ENST00000339566 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
STAMBP-201ENST00000339566 EEA1Q15075 1411 aa10.76□□□□□ -0.69
STAMBP-201ENST00000339566 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
STAMBP-201ENST00000339566 ABCC9O60706 1549 aa10.74□□□□□ -0.69
STAMBP-201ENST00000339566 ZNF777Q9ULD5 760 aaPredicted RBP10.73□□□□□ -0.69
STAMBP-201ENST00000339566 WDR43Q15061 677 aaKnown RBP eCLIP10.73□□□□□ -0.69
STAMBP-201ENST00000339566 AEBP2Q6ZN18 517 aaPredicted RBP10.73□□□□□ -0.69
STAMBP-201ENST00000339566 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
STAMBP-201ENST00000339566 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
STAMBP-201ENST00000339566 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
STAMBP-201ENST00000339566 PNNQ9H307 717 aaKnown RBP10.71□□□□□ -0.69
STAMBP-201ENST00000339566 L1TD1Q5T7N2 865 aaKnown RBP10.69□□□□□ -0.7
STAMBP-201ENST00000339566 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
STAMBP-201ENST00000339566 CCNB3Q8WWL7 1395 aa10.68□□□□□ -0.7
STAMBP-201ENST00000339566 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
STAMBP-201ENST00000339566 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
STAMBP-201ENST00000339566 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
STAMBP-201ENST00000339566 NCLP19338 710 aaKnown RBP10.67□□□□□ -0.7
STAMBP-201ENST00000339566 GOLGA6L22H0YM25 854 aa10.67□□□□□ -0.7
STAMBP-201ENST00000339566 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
STAMBP-201ENST00000339566 SOGA1O94964 1423 aa10.66□□□□□ -0.7
STAMBP-201ENST00000339566 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
STAMBP-201ENST00000339566 DNTTIP2Q5QJE6 756 aaKnown RBP10.65□□□□□ -0.7
STAMBP-201ENST00000339566 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.71
STAMBP-201ENST00000339566 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
STAMBP-201ENST00000339566 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
STAMBP-201ENST00000339566 HSPA5P11021 654 aaKnown RBP10.63□□□□□ -0.71
STAMBP-201ENST00000339566 GSE1Q14687 1217 aa10.63□□□□□ -0.71
STAMBP-201ENST00000339566 SLKQ9H2G2 1235 aaPredicted RBP10.63□□□□□ -0.71
STAMBP-201ENST00000339566 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
STAMBP-201ENST00000339566 GZF1Q9H116 711 aaPredicted RBP10.63□□□□□ -0.71
STAMBP-201ENST00000339566 HSP90AA2PQ14568 343 aaPredicted RBP10.62□□□□□ -0.71
STAMBP-201ENST00000339566 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
STAMBP-201ENST00000339566 PPP1R15AO75807 674 aaPredicted RBP10.62□□□□□ -0.71
STAMBP-201ENST00000339566 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
STAMBP-201ENST00000339566 DHX57Q6P158 1386 aaKnown RBP10.61□□□□□ -0.71
STAMBP-201ENST00000339566 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.712e-6■■■■□ 22.3
STAMBP-201ENST00000339566 ARID3AQ99856 593 aa10.6□□□□□ -0.71
STAMBP-201ENST00000339566 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
STAMBP-201ENST00000339566 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
STAMBP-201ENST00000339566 NUDCQ9Y266 331 aa10.59□□□□□ -0.71
STAMBP-201ENST00000339566 RCAN3Q9UKA8 241 aa10.59□□□□□ -0.71
STAMBP-201ENST00000339566 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
STAMBP-201ENST00000339566 PDE4AP27815 886 aa10.58□□□□□ -0.72
STAMBP-201ENST00000339566 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
STAMBP-201ENST00000339566 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
STAMBP-201ENST00000339566 MSH5O43196 834 aa10.57□□□□□ -0.72
STAMBP-201ENST00000339566 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
STAMBP-201ENST00000339566 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
STAMBP-201ENST00000339566 CARD11Q9BXL7 1154 aa10.57□□□□□ -0.72
STAMBP-201ENST00000339566 CDK11BP21127 795 aaKnown RBP10.56□□□□□ -0.72
STAMBP-201ENST00000339566 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
STAMBP-201ENST00000339566 GOLGA6L3A6NEY3 463 aa10.55□□□□□ -0.72
STAMBP-201ENST00000339566 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
STAMBP-201ENST00000339566 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
STAMBP-201ENST00000339566 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
STAMBP-201ENST00000339566 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
STAMBP-201ENST00000339566 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
STAMBP-201ENST00000339566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■□□□ 12.3
STAMBP-201ENST00000339566 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
STAMBP-201ENST00000339566 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
STAMBP-201ENST00000339566 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
STAMBP-201ENST00000339566 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
STAMBP-201ENST00000339566 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
STAMBP-201ENST00000339566 HSCBQ8IWL3 235 aa10.51□□□□□ -0.73
STAMBP-201ENST00000339566 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
STAMBP-201ENST00000339566 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
STAMBP-201ENST00000339566 FBLN2P98095 1184 aa10.51□□□□□ -0.73
STAMBP-201ENST00000339566 KNSTRNQ9Y448 316 aa10.5□□□□□ -0.73
STAMBP-201ENST00000339566 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
STAMBP-201ENST00000339566 FTSJ3Q8IY81 847 aaKnown RBP10.5□□□□□ -0.73
STAMBP-201ENST00000339566 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
STAMBP-201ENST00000339566 PLPPR3Q6T4P5 718 aa10.49□□□□□ -0.73
STAMBP-201ENST00000339566 ZBED9Q6R2W3 1325 aa10.49□□□□□ -0.73
STAMBP-201ENST00000339566 TSPY4P0CV99 314 aa10.48□□□□□ -0.73
STAMBP-201ENST00000339566 TSPY10P0CW01 314 aa10.48□□□□□ -0.73
STAMBP-201ENST00000339566 NFKBIBQ15653 356 aa10.48□□□□□ -0.73
STAMBP-201ENST00000339566 PRKRIP1Q9H875 184 aaPredicted RBP10.48□□□□□ -0.73
STAMBP-201ENST00000339566 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
STAMBP-201ENST00000339566 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
STAMBP-201ENST00000339566 ABCC8Q09428 1581 aa10.46□□□□□ -0.73
STAMBP-201ENST00000339566 FOXD1Q16676 465 aa10.46□□□□□ -0.73
STAMBP-201ENST00000339566 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
STAMBP-201ENST00000339566 GBP4Q96PP9 640 aa10.44□□□□□ -0.74
STAMBP-201ENST00000339566 PLIN1O60240 522 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms