RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
SRFBP1-201ENST00000339397 FHOD3Q2V2M9 1422 aa11.31□□□□□ -0.6
SRFBP1-201ENST00000339397 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
SRFBP1-201ENST00000339397 CUL7Q14999 1698 aa11.29□□□□□ -0.6
SRFBP1-201ENST00000339397 WDR62O43379 1518 aa11.29□□□□□ -0.6
SRFBP1-201ENST00000339397 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
SRFBP1-201ENST00000339397 GRIN2BQ13224 1484 aa11.23□□□□□ -0.61
SRFBP1-201ENST00000339397 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
SRFBP1-201ENST00000339397 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
SRFBP1-201ENST00000339397 FBLN2P98095 1184 aa11.23□□□□□ -0.61
SRFBP1-201ENST00000339397 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
SRFBP1-201ENST00000339397 ITGAEP38570 1179 aa11.22□□□□□ -0.61
SRFBP1-201ENST00000339397 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
SRFBP1-201ENST00000339397 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
SRFBP1-201ENST00000339397 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
SRFBP1-201ENST00000339397 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
SRFBP1-201ENST00000339397 PCF11O94913 1555 aaKnown RBP11.2□□□□□ -0.62
SRFBP1-201ENST00000339397 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
SRFBP1-201ENST00000339397 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
SRFBP1-201ENST00000339397 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
SRFBP1-201ENST00000339397 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
SRFBP1-201ENST00000339397 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
SRFBP1-201ENST00000339397 LRRC9Q6ZRR7 1453 aa11.17□□□□□ -0.62
SRFBP1-201ENST00000339397 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
SRFBP1-201ENST00000339397 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
SRFBP1-201ENST00000339397 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.62
SRFBP1-201ENST00000339397 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
SRFBP1-201ENST00000339397 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
SRFBP1-201ENST00000339397 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
SRFBP1-201ENST00000339397 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
SRFBP1-201ENST00000339397 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
SRFBP1-201ENST00000339397 FAM50AQ14320 339 aaKnown RBP11.12□□□□□ -0.63
SRFBP1-201ENST00000339397 IQGAP2Q13576 1575 aa11.12□□□□□ -0.63
SRFBP1-201ENST00000339397 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
SRFBP1-201ENST00000339397 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
SRFBP1-201ENST00000339397 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
SRFBP1-201ENST00000339397 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
SRFBP1-201ENST00000339397 MTUS2Q5JR59 1369 aa11.08□□□□□ -0.64
SRFBP1-201ENST00000339397 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
SRFBP1-201ENST00000339397 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
SRFBP1-201ENST00000339397 DISP1Q96F81 1524 aa11.07□□□□□ -0.64
SRFBP1-201ENST00000339397 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
SRFBP1-201ENST00000339397 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
SRFBP1-201ENST00000339397 CFAP43Q8NDM7 1665 aa11.06□□□□□ -0.64
SRFBP1-201ENST00000339397 UGGT2Q9NYU1 1516 aa11.05□□□□□ -0.64
SRFBP1-201ENST00000339397 MAGI3Q5TCQ9 1506 aa11.05□□□□□ -0.64
SRFBP1-201ENST00000339397 CDK13Q14004 1512 aaKnown RBP11.04□□□□□ -0.64
SRFBP1-201ENST00000339397 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.65
SRFBP1-201ENST00000339397 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
SRFBP1-201ENST00000339397 EPRSP07814 1512 aaKnown RBP11.01□□□□□ -0.65
SRFBP1-201ENST00000339397 NUP160Q12769 1436 aa11.01□□□□□ -0.65
SRFBP1-201ENST00000339397 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
SRFBP1-201ENST00000339397 NCOA2Q15596 1464 aa11□□□□□ -0.65
SRFBP1-201ENST00000339397 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
SRFBP1-201ENST00000339397 PLB1Q6P1J6 1458 aa10.99□□□□□ -0.65
SRFBP1-201ENST00000339397 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
SRFBP1-201ENST00000339397 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
SRFBP1-201ENST00000339397 NUP153P49790 1475 aaKnown RBP10.98□□□□□ -0.65
SRFBP1-201ENST00000339397 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.66
SRFBP1-201ENST00000339397 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
SRFBP1-201ENST00000339397 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
SRFBP1-201ENST00000339397 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
SRFBP1-201ENST00000339397 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
SRFBP1-201ENST00000339397 ZNF644Q9H582 1327 aaPredicted RBP10.94□□□□□ -0.66
SRFBP1-201ENST00000339397 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
SRFBP1-201ENST00000339397 CARMIL2Q6F5E8 1435 aa10.93□□□□□ -0.66
SRFBP1-201ENST00000339397 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
SRFBP1-201ENST00000339397 RRP7BPQ9NSQ0 103 aa10.92□□□□□ -0.66
SRFBP1-201ENST00000339397 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
SRFBP1-201ENST00000339397 SUPT6HQ7KZ85 1726 aaKnown RBP10.92□□□□□ -0.66
SRFBP1-201ENST00000339397 ARHGEF11O15085 1522 aa10.91□□□□□ -0.66
SRFBP1-201ENST00000339397 SIN3AQ96ST3 1273 aa10.91□□□□□ -0.66
SRFBP1-201ENST00000339397 CHD1O14646 1710 aa10.91□□□□□ -0.66
SRFBP1-201ENST00000339397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.66
SRFBP1-201ENST00000339397 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
SRFBP1-201ENST00000339397 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
SRFBP1-201ENST00000339397 PTPRGP23470 1445 aa10.88□□□□□ -0.67
SRFBP1-201ENST00000339397 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
SRFBP1-201ENST00000339397 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
SRFBP1-201ENST00000339397 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
SRFBP1-201ENST00000339397 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
SRFBP1-201ENST00000339397 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
SRFBP1-201ENST00000339397 ATP10BO94823 1461 aa10.86□□□□□ -0.67
SRFBP1-201ENST00000339397 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
SRFBP1-201ENST00000339397 NAIPQ13075 1403 aa10.85□□□□□ -0.67
SRFBP1-201ENST00000339397 PHF23Q9BUL5 403 aaPredicted RBP10.85□□□□□ -0.67
SRFBP1-201ENST00000339397 PLEKHD1A6NEE1 506 aa10.85□□□□□ -0.67
SRFBP1-201ENST00000339397 DIEXFQ68CQ4 756 aaKnown RBP10.85□□□□□ -0.67
SRFBP1-201ENST00000339397 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
SRFBP1-201ENST00000339397 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
SRFBP1-201ENST00000339397 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
SRFBP1-201ENST00000339397 KIF14Q15058 1648 aa10.83□□□□□ -0.68
SRFBP1-201ENST00000339397 ABCA8O94911 1581 aa10.83□□□□□ -0.68
SRFBP1-201ENST00000339397 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
SRFBP1-201ENST00000339397 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
SRFBP1-201ENST00000339397 GPATCH8Q9UKJ3 1502 aaKnown RBP10.81□□□□□ -0.68
SRFBP1-201ENST00000339397 KDM6BO15054 1643 aa10.8□□□□□ -0.68
SRFBP1-201ENST00000339397 ABCC5O15440 1437 aa10.8□□□□□ -0.68
SRFBP1-201ENST00000339397 FOXD1Q16676 465 aa10.79□□□□□ -0.68
SRFBP1-201ENST00000339397 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms