RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RUSC2Q8N2Y8 1516 aa33.66■■■□□ 2.98
ITGA4-202ENST00000339307 CUL7Q14999 1698 aa33.6■■■□□ 2.97
ITGA4-202ENST00000339307 KIAA0586Q9BVV6 1533 aa33.53■■■□□ 2.96
ITGA4-202ENST00000339307 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
ITGA4-202ENST00000339307 NPM1P06748 294 aaKnown RBP eCLIP33.5■■■□□ 2.95
ITGA4-202ENST00000339307 TTBK1Q5TCY1 1321 aaPredicted RBP33.43■■■□□ 2.94
ITGA4-202ENST00000339307 FAM69CQ0P6D2 419 aa33.31■■■□□ 2.92
ITGA4-202ENST00000339307 ADCY10Q96PN6 1610 aa33.3■■■□□ 2.92
ITGA4-202ENST00000339307 KIF13AQ9H1H9 1805 aa33.29■■■□□ 2.92
ITGA4-202ENST00000339307 PTPRGP23470 1445 aa33.27■■■□□ 2.92
ITGA4-202ENST00000339307 CARMIL2Q6F5E8 1435 aa33.27■■■□□ 2.92
ITGA4-202ENST00000339307 IQGAP2Q13576 1575 aa33.24■■■□□ 2.91
ITGA4-202ENST00000339307 AEBP2Q6ZN18 517 aaPredicted RBP33.22■■■□□ 2.91
ITGA4-202ENST00000339307 RAPGEF2Q9Y4G8 1499 aa33.21■■■□□ 2.91
ITGA4-202ENST00000339307 TNIKQ9UKE5 1360 aa33.2■■■□□ 2.91
ITGA4-202ENST00000339307 ABCC10Q5T3U5 1492 aa33.2■■■□□ 2.91
ITGA4-202ENST00000339307 MAPKBP1O60336 1514 aa33.2■■■□□ 2.91
ITGA4-202ENST00000339307 DIP2BQ9P265 1576 aa33.1■■■□□ 2.89
ITGA4-202ENST00000339307 DISP1Q96F81 1524 aa33.04■■■□□ 2.88
ITGA4-202ENST00000339307 ABCC2Q92887 1545 aa33.01■■■□□ 2.88
ITGA4-202ENST00000339307 UACAQ9BZF9 1416 aa32.99■■■□□ 2.87
ITGA4-202ENST00000339307 TSPOAP1O95153 1857 aa32.98■■■□□ 2.87
ITGA4-202ENST00000339307 UGGT2Q9NYU1 1516 aa32.98■■■□□ 2.87
ITGA4-202ENST00000339307 ASXL2Q76L83 1435 aa32.93■■■□□ 2.86
ITGA4-202ENST00000339307 UHRF1BP1LA0JNW5 1464 aa32.92■■■□□ 2.86
ITGA4-202ENST00000339307 KIAA0556O60303 1618 aa32.92■■■□□ 2.86
ITGA4-202ENST00000339307 CTTNBP2Q8WZ74 1663 aa32.9■■■□□ 2.86
ITGA4-202ENST00000339307 PLB1Q6P1J6 1458 aa32.89■■■□□ 2.86
ITGA4-202ENST00000339307 KDM6BO15054 1643 aa32.85■■■□□ 2.85
ITGA4-202ENST00000339307 PRXQ9BXM0 1461 aa32.83■■■□□ 2.85
ITGA4-202ENST00000339307 GOLGA3Q08378 1498 aa32.8■■■□□ 2.84
ITGA4-202ENST00000339307 KDM5BQ9UGL1 1544 aa32.78■■■□□ 2.84
ITGA4-202ENST00000339307 ZCCHC11Q5TAX3 1644 aaKnown RBP32.76■■■□□ 2.84
ITGA4-202ENST00000339307 CSRNP3Q8WYN3 585 aa32.74■■■□□ 2.83
ITGA4-202ENST00000339307 GLI2P10070 1586 aa32.73■■■□□ 2.83
ITGA4-202ENST00000339307 P3H3Q8IVL6 736 aa32.7■■■□□ 2.83
ITGA4-202ENST00000339307 EPRSP07814 1512 aaKnown RBP32.7■■■□□ 2.82
ITGA4-202ENST00000339307 FAM9AQ8IZU1 332 aaPredicted RBP32.69■■■□□ 2.82
ITGA4-202ENST00000339307 PPRC1Q5VV67 1664 aaKnown RBP32.63■■■□□ 2.81
ITGA4-202ENST00000339307 KCNH8Q96L42 1107 aa32.61■■■□□ 2.81
ITGA4-202ENST00000339307 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
ITGA4-202ENST00000339307 ARID3CA6NKF2 412 aa32.6■■■□□ 2.81
ITGA4-202ENST00000339307 RANGAP1P46060 587 aaPredicted RBP32.6■■■□□ 2.81
ITGA4-202ENST00000339307 ABCA8O94911 1581 aa32.59■■■□□ 2.81
ITGA4-202ENST00000339307 MAP3K4Q9Y6R4 1608 aa32.57■■■□□ 2.81
ITGA4-202ENST00000339307 TEX14Q8IWB6 1497 aa32.55■■■□□ 2.8
ITGA4-202ENST00000339307 EEA1Q15075 1411 aa32.52■■■□□ 2.8
ITGA4-202ENST00000339307 KDM4FA0A1W2PPD8 638 aa32.49■■■□□ 2.79
ITGA4-202ENST00000339307 CD109Q6YHK3 1445 aa32.45■■■□□ 2.78
ITGA4-202ENST00000339307 COL17A1Q9UMD9 1497 aaPredicted RBP32.44■■■□□ 2.78
ITGA4-202ENST00000339307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.43■■■□□ 2.78
ITGA4-202ENST00000339307 HNRNPUL2Q1KMD3 747 aaKnown RBP32.43■■■□□ 2.78
ITGA4-202ENST00000339307 SAMD9Q5K651 1589 aa32.39■■■□□ 2.78
ITGA4-202ENST00000339307 EHMT2Q96KQ7 1210 aa32.37■■■□□ 2.77
ITGA4-202ENST00000339307 ATP10BO94823 1461 aa32.37■■■□□ 2.77
ITGA4-202ENST00000339307 CFAP43Q8NDM7 1665 aa32.36■■■□□ 2.77
ITGA4-202ENST00000339307 MAGI3Q5TCQ9 1506 aa32.32■■■□□ 2.77
ITGA4-202ENST00000339307 RAPGEF6Q8TEU7 1601 aa32.31■■■□□ 2.76
ITGA4-202ENST00000339307 FHOD3Q2V2M9 1422 aa32.29■■■□□ 2.76
ITGA4-202ENST00000339307 ADGRL1O94910 1474 aa32.25■■■□□ 2.75
ITGA4-202ENST00000339307 KIF21BO75037 1637 aa32.23■■■□□ 2.75
ITGA4-202ENST00000339307 UBTFP17480 764 aaKnown RBP32.22■■■□□ 2.75
ITGA4-202ENST00000339307 CHIC1Q5VXU3 224 aa32.22■■■□□ 2.75
ITGA4-202ENST00000339307 NUP153P49790 1475 aaKnown RBP32.17■■■□□ 2.74
ITGA4-202ENST00000339307 ABCA9Q8IUA7 1624 aa32.13■■■□□ 2.73
ITGA4-202ENST00000339307 PLEKHD1A6NEE1 506 aa32.13■■■□□ 2.73
ITGA4-202ENST00000339307 EFCAB5A4FU69 1503 aa32.12■■■□□ 2.73
ITGA4-202ENST00000339307 ATP1B4Q9UN42 357 aaPredicted RBP32.08■■■□□ 2.73
ITGA4-202ENST00000339307 ARAP3Q8WWN8 1544 aa32.06■■■□□ 2.72
ITGA4-202ENST00000339307 RAPGEF3O95398 923 aa32.03■■■□□ 2.72
ITGA4-202ENST00000339307 PHLDB1Q86UU1 1377 aa32.03■■■□□ 2.72
ITGA4-202ENST00000339307 NEO1Q92859 1461 aa31.97■■■□□ 2.71
ITGA4-202ENST00000339307 CDK13Q14004 1512 aaKnown RBP31.93■■■□□ 2.7
ITGA4-202ENST00000339307 FMN1Q68DA7 1419 aa31.89■■■□□ 2.7
ITGA4-202ENST00000339307 ARHGAP35Q9NRY4 1499 aa31.88■■■□□ 2.69
ITGA4-202ENST00000339307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.87■■■□□ 2.69
ITGA4-202ENST00000339307 ARID4BQ4LE39 1312 aaPredicted RBP31.86■■■□□ 2.69
ITGA4-202ENST00000339307 FANCAO15360 1455 aa31.84■■■□□ 2.69
ITGA4-202ENST00000339307 AKNAQ7Z591 1439 aa31.83■■■□□ 2.69
ITGA4-202ENST00000339307 TTC37Q6PGP7 1564 aa31.82■■■□□ 2.68
ITGA4-202ENST00000339307 HECW1Q76N89 1606 aa31.82■■■□□ 2.68
ITGA4-202ENST00000339307 DENND4BO75064 1496 aaPredicted RBP31.81■■■□□ 2.68
ITGA4-202ENST00000339307 CDK11AQ9UQ88 783 aaPredicted RBP31.8■■■□□ 2.68
ITGA4-202ENST00000339307 FRMPD1Q5SYB0 1578 aa31.79■■■□□ 2.68
ITGA4-202ENST00000339307 CFAP74Q9C0B2 1584 aa31.78■■■□□ 2.68
ITGA4-202ENST00000339307 HECW2Q9P2P5 1572 aa31.75■■■□□ 2.67
ITGA4-202ENST00000339307 RICTORQ6R327 1708 aa31.69■■■□□ 2.66
ITGA4-202ENST00000339307 PLCH2O75038 1416 aa31.69■■■□□ 2.66
ITGA4-202ENST00000339307 EFCAB2Q5VUJ9 269 aa31.65■■■□□ 2.66
ITGA4-202ENST00000339307 SCAPERQ9BY12 1400 aa31.65■■■□□ 2.66
ITGA4-202ENST00000339307 ADAMTSL3P82987 1691 aa31.64■■■□□ 2.65
ITGA4-202ENST00000339307 ARHGEF40Q8TER5 1519 aa31.64■■■□□ 2.65
ITGA4-202ENST00000339307 CLIP1P30622 1438 aa31.63■■■□□ 2.65
ITGA4-202ENST00000339307 PTPRMP28827 1452 aa31.62■■■□□ 2.65
ITGA4-202ENST00000339307 TROQ12816 1431 aaPredicted RBP31.61■■■□□ 2.65
ITGA4-202ENST00000339307 KIF14Q15058 1648 aa31.61■■■□□ 2.65
ITGA4-202ENST00000339307 BCORL1Q5H9F3 1711 aa31.61■■■□□ 2.65
ITGA4-202ENST00000339307 MYO5CQ9NQX4 1742 aa31.6■■■□□ 2.65
ITGA4-202ENST00000339307 ZFYVE16Q7Z3T8 1539 aa31.58■■■□□ 2.65
ITGA4-202ENST00000339307 PLPPR3Q6T4P5 718 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms