RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
LRP1-202ENST00000338962 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
LRP1-202ENST00000338962 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
LRP1-202ENST00000338962 NUP160Q12769 1436 aa17.36■□□□□ 0.37
LRP1-202ENST00000338962 HRCP23327 699 aa17.34■□□□□ 0.37
LRP1-202ENST00000338962 CHD1O14646 1710 aa17.32■□□□□ 0.36
LRP1-202ENST00000338962 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
LRP1-202ENST00000338962 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.35
LRP1-202ENST00000338962 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
LRP1-202ENST00000338962 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
LRP1-202ENST00000338962 CLIP1P30622 1438 aa17.23■□□□□ 0.35
LRP1-202ENST00000338962 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
LRP1-202ENST00000338962 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
LRP1-202ENST00000338962 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
LRP1-202ENST00000338962 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
LRP1-202ENST00000338962 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
LRP1-202ENST00000338962 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
LRP1-202ENST00000338962 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
LRP1-202ENST00000338962 CTTNBP2Q8WZ74 1663 aa17.09■□□□□ 0.33
LRP1-202ENST00000338962 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
LRP1-202ENST00000338962 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
LRP1-202ENST00000338962 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
LRP1-202ENST00000338962 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
LRP1-202ENST00000338962 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.31
LRP1-202ENST00000338962 APLP2Q06481 763 aa17.01■□□□□ 0.31
LRP1-202ENST00000338962 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
LRP1-202ENST00000338962 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
LRP1-202ENST00000338962 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
LRP1-202ENST00000338962 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
LRP1-202ENST00000338962 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
LRP1-202ENST00000338962 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
LRP1-202ENST00000338962 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
LRP1-202ENST00000338962 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
LRP1-202ENST00000338962 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
LRP1-202ENST00000338962 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
LRP1-202ENST00000338962 PTPRGP23470 1445 aa16.96■□□□□ 0.31
LRP1-202ENST00000338962 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
LRP1-202ENST00000338962 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
LRP1-202ENST00000338962 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
LRP1-202ENST00000338962 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
LRP1-202ENST00000338962 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
LRP1-202ENST00000338962 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
LRP1-202ENST00000338962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
LRP1-202ENST00000338962 ABCA8O94911 1581 aa16.8■□□□□ 0.28
LRP1-202ENST00000338962 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
LRP1-202ENST00000338962 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
LRP1-202ENST00000338962 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
LRP1-202ENST00000338962 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
LRP1-202ENST00000338962 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
LRP1-202ENST00000338962 ADCY10Q96PN6 1610 aa16.75■□□□□ 0.27
LRP1-202ENST00000338962 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
LRP1-202ENST00000338962 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
LRP1-202ENST00000338962 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
LRP1-202ENST00000338962 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
LRP1-202ENST00000338962 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
LRP1-202ENST00000338962 ATP10BO94823 1461 aa16.71■□□□□ 0.27
LRP1-202ENST00000338962 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
LRP1-202ENST00000338962 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
LRP1-202ENST00000338962 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
LRP1-202ENST00000338962 ATP1B4Q9UN42 357 aaPredicted RBP16.68■□□□□ 0.26
LRP1-202ENST00000338962 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
LRP1-202ENST00000338962 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
LRP1-202ENST00000338962 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
LRP1-202ENST00000338962 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
LRP1-202ENST00000338962 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
LRP1-202ENST00000338962 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
LRP1-202ENST00000338962 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
LRP1-202ENST00000338962 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
LRP1-202ENST00000338962 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
LRP1-202ENST00000338962 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
LRP1-202ENST00000338962 ZCCHC11Q5TAX3 1644 aaKnown RBP16.61■□□□□ 0.25
LRP1-202ENST00000338962 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
LRP1-202ENST00000338962 ASXL2Q76L83 1435 aa16.61■□□□□ 0.25
LRP1-202ENST00000338962 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
LRP1-202ENST00000338962 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
LRP1-202ENST00000338962 WDR7Q9Y4E6 1490 aa16.56■□□□□ 0.24
LRP1-202ENST00000338962 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
LRP1-202ENST00000338962 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
LRP1-202ENST00000338962 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.24
LRP1-202ENST00000338962 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
LRP1-202ENST00000338962 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
LRP1-202ENST00000338962 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
LRP1-202ENST00000338962 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
LRP1-202ENST00000338962 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
LRP1-202ENST00000338962 GLI2P10070 1586 aa16.46■□□□□ 0.23
LRP1-202ENST00000338962 ITGAEP38570 1179 aa16.45■□□□□ 0.22
LRP1-202ENST00000338962 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
LRP1-202ENST00000338962 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
LRP1-202ENST00000338962 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
LRP1-202ENST00000338962 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
LRP1-202ENST00000338962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
LRP1-202ENST00000338962 KIF14Q15058 1648 aa16.4■□□□□ 0.22
LRP1-202ENST00000338962 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
LRP1-202ENST00000338962 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
LRP1-202ENST00000338962 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
LRP1-202ENST00000338962 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
LRP1-202ENST00000338962 NCOA2Q15596 1464 aa16.38■□□□□ 0.21
LRP1-202ENST00000338962 PLCH2O75038 1416 aa16.37■□□□□ 0.21
LRP1-202ENST00000338962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
LRP1-202ENST00000338962 MYT1Q01538 1121 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms