RNA–Protein interactions for RNA: ENST00000338916.8

SYT3-201, Transcript of synaptotagmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYT3, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT3-201ENST00000338916 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
SYT3-201ENST00000338916 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
SYT3-201ENST00000338916 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
SYT3-201ENST00000338916 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
SYT3-201ENST00000338916 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
SYT3-201ENST00000338916 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
SYT3-201ENST00000338916 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
SYT3-201ENST00000338916 NEUROD1Q13562 356 aa23.68■■□□□ 1.38
SYT3-201ENST00000338916 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
SYT3-201ENST00000338916 CTTNBP2Q8WZ74 1663 aa23.64■■□□□ 1.38
SYT3-201ENST00000338916 GRIN2BQ13224 1484 aa23.64■■□□□ 1.37
SYT3-201ENST00000338916 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
SYT3-201ENST00000338916 KANK4Q5T7N3 995 aaPredicted RBP23.6■■□□□ 1.37
SYT3-201ENST00000338916 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
SYT3-201ENST00000338916 PELP1Q8IZL8 1130 aaKnown RBP23.6■■□□□ 1.37
SYT3-201ENST00000338916 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
SYT3-201ENST00000338916 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
SYT3-201ENST00000338916 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
SYT3-201ENST00000338916 EFCAB5A4FU69 1503 aa23.48■■□□□ 1.35
SYT3-201ENST00000338916 GTF3C3Q9Y5Q9 886 aa23.43■■□□□ 1.34
SYT3-201ENST00000338916 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
SYT3-201ENST00000338916 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
SYT3-201ENST00000338916 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
SYT3-201ENST00000338916 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
SYT3-201ENST00000338916 MIER1Q8N108 512 aa23.39■■□□□ 1.34
SYT3-201ENST00000338916 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
SYT3-201ENST00000338916 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
SYT3-201ENST00000338916 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SYT3-201ENST00000338916 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
SYT3-201ENST00000338916 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
SYT3-201ENST00000338916 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
SYT3-201ENST00000338916 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
SYT3-201ENST00000338916 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.33
SYT3-201ENST00000338916 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
SYT3-201ENST00000338916 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
SYT3-201ENST00000338916 ITGAEP38570 1179 aa23.29■■□□□ 1.32
SYT3-201ENST00000338916 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
SYT3-201ENST00000338916 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
SYT3-201ENST00000338916 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
SYT3-201ENST00000338916 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
SYT3-201ENST00000338916 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
SYT3-201ENST00000338916 UGGT2Q9NYU1 1516 aa23.25■■□□□ 1.31
SYT3-201ENST00000338916 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
SYT3-201ENST00000338916 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
SYT3-201ENST00000338916 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
SYT3-201ENST00000338916 NUP160Q12769 1436 aa23.19■■□□□ 1.3
SYT3-201ENST00000338916 FBLN2P98095 1184 aa23.19■■□□□ 1.3
SYT3-201ENST00000338916 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
SYT3-201ENST00000338916 DISP1Q96F81 1524 aa23.14■■□□□ 1.3
SYT3-201ENST00000338916 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
SYT3-201ENST00000338916 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
SYT3-201ENST00000338916 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
SYT3-201ENST00000338916 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
SYT3-201ENST00000338916 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
SYT3-201ENST00000338916 CHD1O14646 1710 aa23.08■■□□□ 1.29
SYT3-201ENST00000338916 FAM50AQ14320 339 aaKnown RBP23.04■■□□□ 1.28
SYT3-201ENST00000338916 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
SYT3-201ENST00000338916 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
SYT3-201ENST00000338916 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
SYT3-201ENST00000338916 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
SYT3-201ENST00000338916 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
SYT3-201ENST00000338916 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
SYT3-201ENST00000338916 EPRSP07814 1512 aaKnown RBP22.94■■□□□ 1.26
SYT3-201ENST00000338916 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
SYT3-201ENST00000338916 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
SYT3-201ENST00000338916 MAGI3Q5TCQ9 1506 aa22.9■■□□□ 1.26
SYT3-201ENST00000338916 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
SYT3-201ENST00000338916 CDK13Q14004 1512 aaKnown RBP22.89■■□□□ 1.25
SYT3-201ENST00000338916 SIN3AQ96ST3 1273 aa22.88■■□□□ 1.25
SYT3-201ENST00000338916 NUP153P49790 1475 aaKnown RBP22.88■■□□□ 1.25
SYT3-201ENST00000338916 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
SYT3-201ENST00000338916 SUPT6HQ7KZ85 1726 aaKnown RBP22.86■■□□□ 1.25
SYT3-201ENST00000338916 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
SYT3-201ENST00000338916 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
SYT3-201ENST00000338916 NCOA2Q15596 1464 aa22.83■■□□□ 1.24
SYT3-201ENST00000338916 ARHGEF11O15085 1522 aa22.81■■□□□ 1.24
SYT3-201ENST00000338916 CLASP1Q7Z460 1538 aa22.8■■□□□ 1.24
SYT3-201ENST00000338916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.79■■□□□ 1.24
SYT3-201ENST00000338916 ABCA8O94911 1581 aa22.79■■□□□ 1.24
SYT3-201ENST00000338916 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
SYT3-201ENST00000338916 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
SYT3-201ENST00000338916 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
SYT3-201ENST00000338916 PTPRGP23470 1445 aa22.72■■□□□ 1.23
SYT3-201ENST00000338916 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
SYT3-201ENST00000338916 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
SYT3-201ENST00000338916 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
SYT3-201ENST00000338916 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
SYT3-201ENST00000338916 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
SYT3-201ENST00000338916 DDX10Q13206 875 aaKnown RBP22.67■■□□□ 1.22
SYT3-201ENST00000338916 PPP1R15AO75807 674 aaPredicted RBP22.65■■□□□ 1.22
SYT3-201ENST00000338916 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
SYT3-201ENST00000338916 ATP10BO94823 1461 aa22.64■■□□□ 1.22
SYT3-201ENST00000338916 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.21
SYT3-201ENST00000338916 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
SYT3-201ENST00000338916 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
SYT3-201ENST00000338916 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
SYT3-201ENST00000338916 TCOF1Q13428 1488 aaKnown RBP22.62■■□□□ 1.21
SYT3-201ENST00000338916 UACAQ9BZF9 1416 aa22.61■■□□□ 1.21
SYT3-201ENST00000338916 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
SYT3-201ENST00000338916 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms