RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
PAX3-202ENST00000336840 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
PAX3-202ENST00000336840 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
PAX3-202ENST00000336840 NUP160Q12769 1436 aa20.11■□□□□ 0.81
PAX3-202ENST00000336840 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.81
PAX3-202ENST00000336840 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.8
PAX3-202ENST00000336840 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.8
PAX3-202ENST00000336840 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
PAX3-202ENST00000336840 FBLN2P98095 1184 aa20.05■□□□□ 0.8
PAX3-202ENST00000336840 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
PAX3-202ENST00000336840 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.8
PAX3-202ENST00000336840 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.79
PAX3-202ENST00000336840 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
PAX3-202ENST00000336840 CLASP1Q7Z460 1538 aa19.93■□□□□ 0.78
PAX3-202ENST00000336840 KIAA0556O60303 1618 aa19.93■□□□□ 0.78
PAX3-202ENST00000336840 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
PAX3-202ENST00000336840 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
PAX3-202ENST00000336840 DISP1Q96F81 1524 aa19.9■□□□□ 0.78
PAX3-202ENST00000336840 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
PAX3-202ENST00000336840 FMN1Q68DA7 1419 aa19.84■□□□□ 0.77
PAX3-202ENST00000336840 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
PAX3-202ENST00000336840 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.77
PAX3-202ENST00000336840 CARMIL2Q6F5E8 1435 aa19.82■□□□□ 0.76
PAX3-202ENST00000336840 FYCO1Q9BQS8 1478 aa19.79■□□□□ 0.76
PAX3-202ENST00000336840 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
PAX3-202ENST00000336840 PRG4Q92954 1404 aaPredicted RBP19.78■□□□□ 0.76
PAX3-202ENST00000336840 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
PAX3-202ENST00000336840 LRRIQ1Q96JM4 1722 aa19.73■□□□□ 0.75
PAX3-202ENST00000336840 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
PAX3-202ENST00000336840 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
PAX3-202ENST00000336840 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
PAX3-202ENST00000336840 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
PAX3-202ENST00000336840 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
PAX3-202ENST00000336840 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
PAX3-202ENST00000336840 APLP2Q06481 763 aa19.66■□□□□ 0.74
PAX3-202ENST00000336840 ABCA8O94911 1581 aa19.65■□□□□ 0.74
PAX3-202ENST00000336840 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
PAX3-202ENST00000336840 PTPRGP23470 1445 aa19.62■□□□□ 0.73
PAX3-202ENST00000336840 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
PAX3-202ENST00000336840 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
PAX3-202ENST00000336840 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
PAX3-202ENST00000336840 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
PAX3-202ENST00000336840 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.73
PAX3-202ENST00000336840 LRRC9Q6ZRR7 1453 aa19.58■□□□□ 0.72
PAX3-202ENST00000336840 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.72
PAX3-202ENST00000336840 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
PAX3-202ENST00000336840 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
PAX3-202ENST00000336840 UACAQ9BZF9 1416 aa19.53■□□□□ 0.72
PAX3-202ENST00000336840 ABCC2Q92887 1545 aa19.52■□□□□ 0.72
PAX3-202ENST00000336840 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
PAX3-202ENST00000336840 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
PAX3-202ENST00000336840 MAGI3Q5TCQ9 1506 aa19.5■□□□□ 0.71
PAX3-202ENST00000336840 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
PAX3-202ENST00000336840 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
PAX3-202ENST00000336840 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
PAX3-202ENST00000336840 ATP10BO94823 1461 aa19.46■□□□□ 0.71
PAX3-202ENST00000336840 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
PAX3-202ENST00000336840 ADCY10Q96PN6 1610 aa19.44■□□□□ 0.7
PAX3-202ENST00000336840 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
PAX3-202ENST00000336840 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
PAX3-202ENST00000336840 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
PAX3-202ENST00000336840 ZCCHC11Q5TAX3 1644 aaKnown RBP19.41■□□□□ 0.7
PAX3-202ENST00000336840 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
PAX3-202ENST00000336840 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
PAX3-202ENST00000336840 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
PAX3-202ENST00000336840 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
PAX3-202ENST00000336840 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
PAX3-202ENST00000336840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
PAX3-202ENST00000336840 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
PAX3-202ENST00000336840 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
PAX3-202ENST00000336840 PHLDB1Q86UU1 1377 aa19.35■□□□□ 0.69
PAX3-202ENST00000336840 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
PAX3-202ENST00000336840 KIF14Q15058 1648 aa19.33■□□□□ 0.69
PAX3-202ENST00000336840 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
PAX3-202ENST00000336840 MYOM3Q5VTT5 1437 aa19.28■□□□□ 0.68
PAX3-202ENST00000336840 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
PAX3-202ENST00000336840 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.67
PAX3-202ENST00000336840 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
PAX3-202ENST00000336840 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
PAX3-202ENST00000336840 CDC42BPAQ5VT25 1732 aa19.24■□□□□ 0.67
PAX3-202ENST00000336840 WDR7Q9Y4E6 1490 aa19.22■□□□□ 0.67
PAX3-202ENST00000336840 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
PAX3-202ENST00000336840 MIA2Q96PC5 1412 aa19.21■□□□□ 0.67
PAX3-202ENST00000336840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.67
PAX3-202ENST00000336840 TTC37Q6PGP7 1564 aa19.2■□□□□ 0.66
PAX3-202ENST00000336840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.19■□□□□ 0.66
PAX3-202ENST00000336840 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
PAX3-202ENST00000336840 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
PAX3-202ENST00000336840 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
PAX3-202ENST00000336840 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
PAX3-202ENST00000336840 MYO5CQ9NQX4 1742 aa19.18■□□□□ 0.66
PAX3-202ENST00000336840 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
PAX3-202ENST00000336840 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
PAX3-202ENST00000336840 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
PAX3-202ENST00000336840 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
PAX3-202ENST00000336840 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
PAX3-202ENST00000336840 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.65
PAX3-202ENST00000336840 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
PAX3-202ENST00000336840 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
PAX3-202ENST00000336840 KCNH8Q96L42 1107 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms