RNA–Protein interactions for RNA: ENST00000335658.6

DPPA4-201, Transcript of developmental pluripotency associated 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DPPA4, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-201ENST00000335658 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
DPPA4-201ENST00000335658 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
DPPA4-201ENST00000335658 FBLN2P98095 1184 aa11.67□□□□□ -0.54
DPPA4-201ENST00000335658 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
DPPA4-201ENST00000335658 IQGAP2Q13576 1575 aa11.64□□□□□ -0.55
DPPA4-201ENST00000335658 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
DPPA4-201ENST00000335658 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
DPPA4-201ENST00000335658 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
DPPA4-201ENST00000335658 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.56
DPPA4-201ENST00000335658 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
DPPA4-201ENST00000335658 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
DPPA4-201ENST00000335658 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
DPPA4-201ENST00000335658 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
DPPA4-201ENST00000335658 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
DPPA4-201ENST00000335658 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
DPPA4-201ENST00000335658 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
DPPA4-201ENST00000335658 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
DPPA4-201ENST00000335658 ARHGEF11O15085 1522 aa11.52□□□□□ -0.56
DPPA4-201ENST00000335658 RIMBP3CA6NJZ7 1639 aa11.52□□□□□ -0.57
DPPA4-201ENST00000335658 RIMBP3BA6NNM3 1639 aa11.52□□□□□ -0.57
DPPA4-201ENST00000335658 RIMBP3Q9UFD9 1639 aa11.52□□□□□ -0.57
DPPA4-201ENST00000335658 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
DPPA4-201ENST00000335658 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
DPPA4-201ENST00000335658 CLIP1P30622 1438 aa11.45□□□□□ -0.58
DPPA4-201ENST00000335658 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
DPPA4-201ENST00000335658 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
DPPA4-201ENST00000335658 PTPRGP23470 1445 aa11.43□□□□□ -0.58
DPPA4-201ENST00000335658 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
DPPA4-201ENST00000335658 UHRF1BP1LA0JNW5 1464 aa11.42□□□□□ -0.58
DPPA4-201ENST00000335658 ABCA8O94911 1581 aa11.41□□□□□ -0.58
DPPA4-201ENST00000335658 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
DPPA4-201ENST00000335658 HRCP23327 699 aa11.4□□□□□ -0.59
DPPA4-201ENST00000335658 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.59
DPPA4-201ENST00000335658 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
DPPA4-201ENST00000335658 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
DPPA4-201ENST00000335658 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
DPPA4-201ENST00000335658 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
DPPA4-201ENST00000335658 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
DPPA4-201ENST00000335658 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
DPPA4-201ENST00000335658 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
DPPA4-201ENST00000335658 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
DPPA4-201ENST00000335658 KDM5BQ9UGL1 1544 aa11.34□□□□□ -0.59
DPPA4-201ENST00000335658 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
DPPA4-201ENST00000335658 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
DPPA4-201ENST00000335658 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
DPPA4-201ENST00000335658 PCF11O94913 1555 aaKnown RBP11.32□□□□□ -0.6
DPPA4-201ENST00000335658 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
DPPA4-201ENST00000335658 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
DPPA4-201ENST00000335658 NUP153P49790 1475 aaKnown RBP11.31□□□□□ -0.6
DPPA4-201ENST00000335658 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
DPPA4-201ENST00000335658 ZCCHC11Q5TAX3 1644 aaKnown RBP11.3□□□□□ -0.6
DPPA4-201ENST00000335658 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
DPPA4-201ENST00000335658 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
DPPA4-201ENST00000335658 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
DPPA4-201ENST00000335658 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
DPPA4-201ENST00000335658 ATP10BO94823 1461 aa11.28□□□□□ -0.6
DPPA4-201ENST00000335658 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
DPPA4-201ENST00000335658 CFAP43Q8NDM7 1665 aa11.26□□□□□ -0.61
DPPA4-201ENST00000335658 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
DPPA4-201ENST00000335658 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
DPPA4-201ENST00000335658 TIAM1Q13009 1591 aa11.22□□□□□ -0.61
DPPA4-201ENST00000335658 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.61
DPPA4-201ENST00000335658 GLI2P10070 1586 aa11.21□□□□□ -0.62
DPPA4-201ENST00000335658 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.62
DPPA4-201ENST00000335658 ASXL2Q76L83 1435 aa11.21□□□□□ -0.62
DPPA4-201ENST00000335658 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
DPPA4-201ENST00000335658 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
DPPA4-201ENST00000335658 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
DPPA4-201ENST00000335658 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
DPPA4-201ENST00000335658 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
DPPA4-201ENST00000335658 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
DPPA4-201ENST00000335658 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
DPPA4-201ENST00000335658 MAGI3Q5TCQ9 1506 aa11.16□□□□□ -0.62
DPPA4-201ENST00000335658 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
DPPA4-201ENST00000335658 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
DPPA4-201ENST00000335658 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.62
DPPA4-201ENST00000335658 KIF14Q15058 1648 aa11.15□□□□□ -0.62
DPPA4-201ENST00000335658 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
DPPA4-201ENST00000335658 APLP2Q06481 763 aa11.13□□□□□ -0.63
DPPA4-201ENST00000335658 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
DPPA4-201ENST00000335658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
DPPA4-201ENST00000335658 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
DPPA4-201ENST00000335658 ARAP3Q8WWN8 1544 aa11.12□□□□□ -0.63
DPPA4-201ENST00000335658 MTUS2Q5JR59 1369 aa11.12□□□□□ -0.63
DPPA4-201ENST00000335658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
DPPA4-201ENST00000335658 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
DPPA4-201ENST00000335658 MYT1Q01538 1121 aa11.1□□□□□ -0.63
DPPA4-201ENST00000335658 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
DPPA4-201ENST00000335658 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
DPPA4-201ENST00000335658 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
DPPA4-201ENST00000335658 PREX2Q70Z35 1606 aa11.08□□□□□ -0.64
DPPA4-201ENST00000335658 CDC42BPAQ5VT25 1732 aa11.08□□□□□ -0.64
DPPA4-201ENST00000335658 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
DPPA4-201ENST00000335658 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
DPPA4-201ENST00000335658 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
DPPA4-201ENST00000335658 KANK4Q5T7N3 995 aaPredicted RBP11.07□□□□□ -0.64
DPPA4-201ENST00000335658 PLCH2O75038 1416 aa11.06□□□□□ -0.64
DPPA4-201ENST00000335658 CD109Q6YHK3 1445 aa11.06□□□□□ -0.64
DPPA4-201ENST00000335658 FAM69CQ0P6D2 419 aa11.06□□□□□ -0.64
DPPA4-201ENST00000335658 PHLDB1Q86UU1 1377 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms