RNA–Protein interactions for RNA: ENST00000335503.3

CCT6A-202, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 5 BASIC

Gene CCT6A, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-202ENST00000335503 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
CCT6A-202ENST00000335503 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
CCT6A-202ENST00000335503 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
CCT6A-202ENST00000335503 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
CCT6A-202ENST00000335503 EFCAB5A4FU69 1503 aa26.27■■□□□ 1.8
CCT6A-202ENST00000335503 IQGAP2Q13576 1575 aa26.23■■□□□ 1.79
CCT6A-202ENST00000335503 SAMD9Q5K651 1589 aa26.19■■□□□ 1.78
CCT6A-202ENST00000335503 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
CCT6A-202ENST00000335503 CEP170Q5SW79 1584 aa26.14■■□□□ 1.78
CCT6A-202ENST00000335503 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.77
CCT6A-202ENST00000335503 CHD1O14646 1710 aa26.11■■□□□ 1.77
CCT6A-202ENST00000335503 FBLN2P98095 1184 aa26.11■■□□□ 1.77
CCT6A-202ENST00000335503 FHOD3Q2V2M9 1422 aa26.1■■□□□ 1.77
CCT6A-202ENST00000335503 PPARGC1BQ86YN6 1023 aaKnown RBP26.1■■□□□ 1.77
CCT6A-202ENST00000335503 NUP160Q12769 1436 aa26.09■■□□□ 1.77
CCT6A-202ENST00000335503 UGGT2Q9NYU1 1516 aa26.08■■□□□ 1.77
CCT6A-202ENST00000335503 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
CCT6A-202ENST00000335503 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
CCT6A-202ENST00000335503 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
CCT6A-202ENST00000335503 APLP2Q06481 763 aa26.04■■□□□ 1.76
CCT6A-202ENST00000335503 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
CCT6A-202ENST00000335503 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
CCT6A-202ENST00000335503 KIAA0556O60303 1618 aa25.97■■□□□ 1.75
CCT6A-202ENST00000335503 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
CCT6A-202ENST00000335503 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
CCT6A-202ENST00000335503 DISP1Q96F81 1524 aa25.93■■□□□ 1.74
CCT6A-202ENST00000335503 CASKIN1Q8WXD9 1431 aa25.92■■□□□ 1.74
CCT6A-202ENST00000335503 CFAP43Q8NDM7 1665 aa25.91■■□□□ 1.74
CCT6A-202ENST00000335503 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
CCT6A-202ENST00000335503 TIAM1Q13009 1591 aa25.91■■□□□ 1.74
CCT6A-202ENST00000335503 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
CCT6A-202ENST00000335503 JPH4Q96JJ6 628 aa25.82■■□□□ 1.72
CCT6A-202ENST00000335503 CARMIL2Q6F5E8 1435 aa25.81■■□□□ 1.72
CCT6A-202ENST00000335503 HECW1Q76N89 1606 aa25.8■■□□□ 1.72
CCT6A-202ENST00000335503 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
CCT6A-202ENST00000335503 ATP1B4Q9UN42 357 aaPredicted RBP25.79■■□□□ 1.72
CCT6A-202ENST00000335503 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
CCT6A-202ENST00000335503 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
CCT6A-202ENST00000335503 LRRC9Q6ZRR7 1453 aa25.75■■□□□ 1.71
CCT6A-202ENST00000335503 RAPGEF6Q8TEU7 1601 aa25.71■■□□□ 1.71
CCT6A-202ENST00000335503 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
CCT6A-202ENST00000335503 CCDC18Q5T9S5 1454 aa25.7■■□□□ 1.71
CCT6A-202ENST00000335503 EPRSP07814 1512 aaKnown RBP25.64■■□□□ 1.7
CCT6A-202ENST00000335503 NUP153P49790 1475 aaKnown RBP25.6■■□□□ 1.69
CCT6A-202ENST00000335503 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
CCT6A-202ENST00000335503 CDK13Q14004 1512 aaKnown RBP25.59■■□□□ 1.69
CCT6A-202ENST00000335503 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
CCT6A-202ENST00000335503 ABCA8O94911 1581 aa25.58■■□□□ 1.68
CCT6A-202ENST00000335503 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
CCT6A-202ENST00000335503 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
CCT6A-202ENST00000335503 MAGI3Q5TCQ9 1506 aa25.54■■□□□ 1.68
CCT6A-202ENST00000335503 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
CCT6A-202ENST00000335503 PTPRGP23470 1445 aa25.54■■□□□ 1.68
CCT6A-202ENST00000335503 RRBP1Q9P2E9 1410 aaKnown RBP25.53■■□□□ 1.68
CCT6A-202ENST00000335503 PHLDB1Q86UU1 1377 aa25.48■■□□□ 1.67
CCT6A-202ENST00000335503 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
CCT6A-202ENST00000335503 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
CCT6A-202ENST00000335503 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
CCT6A-202ENST00000335503 NCOA2Q15596 1464 aa25.44■■□□□ 1.66
CCT6A-202ENST00000335503 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
CCT6A-202ENST00000335503 UACAQ9BZF9 1416 aa25.4■■□□□ 1.66
CCT6A-202ENST00000335503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
CCT6A-202ENST00000335503 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
CCT6A-202ENST00000335503 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
CCT6A-202ENST00000335503 ABCC2Q92887 1545 aa25.37■■□□□ 1.65
CCT6A-202ENST00000335503 ATP10BO94823 1461 aa25.36■■□□□ 1.65
CCT6A-202ENST00000335503 MYOM3Q5VTT5 1437 aa25.34■■□□□ 1.65
CCT6A-202ENST00000335503 TROQ12816 1431 aaPredicted RBP25.34■■□□□ 1.65
CCT6A-202ENST00000335503 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
CCT6A-202ENST00000335503 FGD6Q6ZV73 1430 aa25.33■■□□□ 1.65
CCT6A-202ENST00000335503 UHRF1BP1LA0JNW5 1464 aa25.29■■□□□ 1.64
CCT6A-202ENST00000335503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
CCT6A-202ENST00000335503 KIF14Q15058 1648 aa25.27■■□□□ 1.64
CCT6A-202ENST00000335503 PTPN23Q9H3S7 1636 aa25.25■■□□□ 1.63
CCT6A-202ENST00000335503 FAM50AQ14320 339 aaKnown RBP25.25■■□□□ 1.63
CCT6A-202ENST00000335503 ZCCHC11Q5TAX3 1644 aaKnown RBP25.23■■□□□ 1.63
CCT6A-202ENST00000335503 PLEKHD1A6NEE1 506 aa25.22■■□□□ 1.63
CCT6A-202ENST00000335503 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
CCT6A-202ENST00000335503 MIA2Q96PC5 1412 aa25.19■■□□□ 1.62
CCT6A-202ENST00000335503 KDM5BQ9UGL1 1544 aa25.19■■□□□ 1.62
CCT6A-202ENST00000335503 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
CCT6A-202ENST00000335503 ITGAEP38570 1179 aa25.17■■□□□ 1.62
CCT6A-202ENST00000335503 CDC42BPAQ5VT25 1732 aa25.13■■□□□ 1.61
CCT6A-202ENST00000335503 ABCC10Q5T3U5 1492 aa25.13■■□□□ 1.61
CCT6A-202ENST00000335503 GPATCH8Q9UKJ3 1502 aaKnown RBP25.1■■□□□ 1.61
CCT6A-202ENST00000335503 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
CCT6A-202ENST00000335503 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
CCT6A-202ENST00000335503 PREX2Q70Z35 1606 aa25.03■■□□□ 1.6
CCT6A-202ENST00000335503 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
CCT6A-202ENST00000335503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.61e-12■■■□□ 15.9
CCT6A-202ENST00000335503 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.6
CCT6A-202ENST00000335503 CFDP1Q9UEE9 299 aaPredicted RBP25.01■■□□□ 1.59
CCT6A-202ENST00000335503 DNMT1P26358 1616 aaKnown RBP25.01■■□□□ 1.59
CCT6A-202ENST00000335503 PTPRKQ15262 1439 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
CCT6A-202ENST00000335503 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms