RNA–Protein interactions for RNA: ENST00000335440.10

PDE9A-203, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-203ENST00000335440 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
PDE9A-203ENST00000335440 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
PDE9A-203ENST00000335440 EHMT2Q96KQ7 1210 aa28.46■■■□□ 2.15
PDE9A-203ENST00000335440 UBTFP17480 764 aaKnown RBP28.44■■■□□ 2.14
PDE9A-203ENST00000335440 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
PDE9A-203ENST00000335440 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
PDE9A-203ENST00000335440 UGGT2Q9NYU1 1516 aa28.33■■■□□ 2.13
PDE9A-203ENST00000335440 TNIKQ9UKE5 1360 aa28.33■■■□□ 2.13
PDE9A-203ENST00000335440 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
PDE9A-203ENST00000335440 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
PDE9A-203ENST00000335440 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
PDE9A-203ENST00000335440 CARMIL2Q6F5E8 1435 aa28.21■■■□□ 2.11
PDE9A-203ENST00000335440 SAMD9Q5K651 1589 aa28.21■■■□□ 2.11
PDE9A-203ENST00000335440 DISP1Q96F81 1524 aa28.21■■■□□ 2.11
PDE9A-203ENST00000335440 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
PDE9A-203ENST00000335440 DNAJC5Q9H3Z4 198 aa28.2■■■□□ 2.1
PDE9A-203ENST00000335440 EFCAB5A4FU69 1503 aa28.2■■■□□ 2.1
PDE9A-203ENST00000335440 ERCC6L2Q5T890 1561 aa28.19■■■□□ 2.1
PDE9A-203ENST00000335440 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
PDE9A-203ENST00000335440 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
PDE9A-203ENST00000335440 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
PDE9A-203ENST00000335440 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
PDE9A-203ENST00000335440 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
PDE9A-203ENST00000335440 CLIP1P30622 1438 aa28.1■■■□□ 2.09
PDE9A-203ENST00000335440 ARHGAP35Q9NRY4 1499 aa28.09■■■□□ 2.09
PDE9A-203ENST00000335440 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
PDE9A-203ENST00000335440 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.07
PDE9A-203ENST00000335440 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
PDE9A-203ENST00000335440 PTPRGP23470 1445 aa27.99■■■□□ 2.07
PDE9A-203ENST00000335440 FMN1Q68DA7 1419 aa27.91■■■□□ 2.06
PDE9A-203ENST00000335440 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
PDE9A-203ENST00000335440 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
PDE9A-203ENST00000335440 ABCA8O94911 1581 aa27.85■■■□□ 2.05
PDE9A-203ENST00000335440 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
PDE9A-203ENST00000335440 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.05
PDE9A-203ENST00000335440 RAPGEF6Q8TEU7 1601 aa27.83■■■□□ 2.04
PDE9A-203ENST00000335440 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
PDE9A-203ENST00000335440 ADCY10Q96PN6 1610 aa27.8■■■□□ 2.04
PDE9A-203ENST00000335440 UHRF1BP1LA0JNW5 1464 aa27.8■■■□□ 2.04
PDE9A-203ENST00000335440 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
PDE9A-203ENST00000335440 VPS8Q8N3P4 1428 aa27.75■■■□□ 2.03
PDE9A-203ENST00000335440 HECW1Q76N89 1606 aa27.73■■■□□ 2.03
PDE9A-203ENST00000335440 CASKIN1Q8WXD9 1431 aa27.73■■■□□ 2.03
PDE9A-203ENST00000335440 FYCO1Q9BQS8 1478 aa27.72■■■□□ 2.03
PDE9A-203ENST00000335440 NUP153P49790 1475 aaKnown RBP27.7■■■□□ 2.02
PDE9A-203ENST00000335440 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
PDE9A-203ENST00000335440 LRRIQ1Q96JM4 1722 aa27.64■■■□□ 2.02
PDE9A-203ENST00000335440 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
PDE9A-203ENST00000335440 EPRSP07814 1512 aaKnown RBP27.6■■■□□ 2.01
PDE9A-203ENST00000335440 NPM1P06748 294 aaKnown RBP eCLIP27.6■■■□□ 2.01
PDE9A-203ENST00000335440 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
PDE9A-203ENST00000335440 ATP10BO94823 1461 aa27.59■■■□□ 2.01
PDE9A-203ENST00000335440 CCDC18Q5T9S5 1454 aa27.59■■■□□ 2.01
PDE9A-203ENST00000335440 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
PDE9A-203ENST00000335440 MAPKBP1O60336 1514 aa27.54■■■□□ 2
PDE9A-203ENST00000335440 ARID3CA6NKF2 412 aa27.53■■■□□ 2
PDE9A-203ENST00000335440 CFAP43Q8NDM7 1665 aa27.5■■□□□ 1.99
PDE9A-203ENST00000335440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.49■■□□□ 1.99
PDE9A-203ENST00000335440 HNRNPUL2Q1KMD3 747 aaKnown RBP27.49■■□□□ 1.99
PDE9A-203ENST00000335440 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
PDE9A-203ENST00000335440 TIAM1Q13009 1591 aa27.46■■□□□ 1.99
PDE9A-203ENST00000335440 ASXL2Q76L83 1435 aa27.45■■□□□ 1.99
PDE9A-203ENST00000335440 CDK11AQ9UQ88 783 aaPredicted RBP27.44■■□□□ 1.98
PDE9A-203ENST00000335440 WDR7Q9Y4E6 1490 aa27.43■■□□□ 1.98
PDE9A-203ENST00000335440 APLP2Q06481 763 aa27.41■■□□□ 1.98
PDE9A-203ENST00000335440 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
PDE9A-203ENST00000335440 TROQ12816 1431 aaPredicted RBP27.35■■□□□ 1.97
PDE9A-203ENST00000335440 MAGI3Q5TCQ9 1506 aa27.35■■□□□ 1.97
PDE9A-203ENST00000335440 EHBP1L1Q8N3D4 1523 aa27.33■■□□□ 1.97
PDE9A-203ENST00000335440 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
PDE9A-203ENST00000335440 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
PDE9A-203ENST00000335440 DIP2BQ9P265 1576 aa27.31■■□□□ 1.96
PDE9A-203ENST00000335440 ABCC10Q5T3U5 1492 aa27.3■■□□□ 1.96
PDE9A-203ENST00000335440 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
PDE9A-203ENST00000335440 KIF14Q15058 1648 aa27.29■■□□□ 1.96
PDE9A-203ENST00000335440 GLI2P10070 1586 aa27.25■■□□□ 1.95
PDE9A-203ENST00000335440 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
PDE9A-203ENST00000335440 SUPT6HQ7KZ85 1726 aaKnown RBP27.24■■□□□ 1.95
PDE9A-203ENST00000335440 KANK4Q5T7N3 995 aaPredicted RBP27.23■■□□□ 1.95
PDE9A-203ENST00000335440 ABCA9Q8IUA7 1624 aa27.23■■□□□ 1.95
PDE9A-203ENST00000335440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.2■■□□□ 1.95
PDE9A-203ENST00000335440 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
PDE9A-203ENST00000335440 FAM69CQ0P6D2 419 aa27.18■■□□□ 1.94
PDE9A-203ENST00000335440 MAP3K4Q9Y6R4 1608 aa27.18■■□□□ 1.94
PDE9A-203ENST00000335440 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
PDE9A-203ENST00000335440 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
PDE9A-203ENST00000335440 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
PDE9A-203ENST00000335440 CDC42BPAQ5VT25 1732 aa27.11■■□□□ 1.93
PDE9A-203ENST00000335440 TSPOAP1O95153 1857 aa27.11■■□□□ 1.93
PDE9A-203ENST00000335440 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
PDE9A-203ENST00000335440 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.93
PDE9A-203ENST00000335440 PREX2Q70Z35 1606 aa27.07■■□□□ 1.92
PDE9A-203ENST00000335440 CDC42BPBQ9Y5S2 1711 aa27.06■■□□□ 1.92
PDE9A-203ENST00000335440 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
PDE9A-203ENST00000335440 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
PDE9A-203ENST00000335440 PPRC1Q5VV67 1664 aaKnown RBP27.05■■□□□ 1.92
PDE9A-203ENST00000335440 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
PDE9A-203ENST00000335440 PLCH2O75038 1416 aa27.03■■□□□ 1.92
PDE9A-203ENST00000335440 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
PDE9A-203ENST00000335440 TEX14Q8IWB6 1497 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms