RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 CEP170Q5SW79 1584 aa31.14■■■□□ 2.58
HLA-F-217ENST00000334668 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
HLA-F-217ENST00000334668 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
HLA-F-217ENST00000334668 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
HLA-F-217ENST00000334668 ARHGEF11O15085 1522 aa31.14■■■□□ 2.57
HLA-F-217ENST00000334668 CARMIL1Q5VZK9 1371 aa31.1■■■□□ 2.57
HLA-F-217ENST00000334668 SHROOM2Q13796 1616 aa30.96■■■□□ 2.55
HLA-F-217ENST00000334668 RAPGEF2Q9Y4G8 1499 aa30.92■■■□□ 2.54
HLA-F-217ENST00000334668 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
HLA-F-217ENST00000334668 KIAA0586Q9BVV6 1533 aa30.89■■■□□ 2.54
HLA-F-217ENST00000334668 EEA1Q15075 1411 aa30.87■■■□□ 2.53
HLA-F-217ENST00000334668 PRXQ9BXM0 1461 aa30.87■■■□□ 2.53
HLA-F-217ENST00000334668 JPH4Q96JJ6 628 aa30.84■■■□□ 2.53
HLA-F-217ENST00000334668 ERCC6L2Q5T890 1561 aa30.81■■■□□ 2.52
HLA-F-217ENST00000334668 CSRNP3Q8WYN3 585 aa30.8■■■□□ 2.52
HLA-F-217ENST00000334668 CYB5RLQ6IPT4 315 aa30.79■■■□□ 2.52
HLA-F-217ENST00000334668 PRG4Q92954 1404 aaPredicted RBP30.75■■■□□ 2.51
HLA-F-217ENST00000334668 IQGAP2Q13576 1575 aa30.71■■■□□ 2.51
HLA-F-217ENST00000334668 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
HLA-F-217ENST00000334668 FAM9AQ8IZU1 332 aaPredicted RBP30.61■■■□□ 2.49
HLA-F-217ENST00000334668 UGGT2Q9NYU1 1516 aa30.58■■■□□ 2.49
HLA-F-217ENST00000334668 KIF21BO75037 1637 aa30.55■■■□□ 2.48
HLA-F-217ENST00000334668 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
HLA-F-217ENST00000334668 CARMIL2Q6F5E8 1435 aa30.51■■■□□ 2.47
HLA-F-217ENST00000334668 TNIKQ9UKE5 1360 aa30.43■■■□□ 2.46
HLA-F-217ENST00000334668 KIAA0556O60303 1618 aa30.42■■■□□ 2.46
HLA-F-217ENST00000334668 PTPRGP23470 1445 aa30.39■■■□□ 2.46
HLA-F-217ENST00000334668 GOLGA3Q08378 1498 aa30.37■■■□□ 2.45
HLA-F-217ENST00000334668 POTEDQ86YR6 584 aa30.35■■■□□ 2.45
HLA-F-217ENST00000334668 ADCY10Q96PN6 1610 aa30.32■■■□□ 2.44
HLA-F-217ENST00000334668 SAMD9Q5K651 1589 aa30.27■■■□□ 2.44
HLA-F-217ENST00000334668 UHRF1BP1LA0JNW5 1464 aa30.23■■■□□ 2.43
HLA-F-217ENST00000334668 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
HLA-F-217ENST00000334668 TTBK1Q5TCY1 1321 aaPredicted RBP30.21■■■□□ 2.43
HLA-F-217ENST00000334668 UBTFP17480 764 aaKnown RBP30.19■■■□□ 2.42
HLA-F-217ENST00000334668 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
HLA-F-217ENST00000334668 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
HLA-F-217ENST00000334668 EFCAB5A4FU69 1503 aa30.12■■■□□ 2.41
HLA-F-217ENST00000334668 MAPKBP1O60336 1514 aa30.12■■■□□ 2.41
HLA-F-217ENST00000334668 NPM1P06748 294 aaKnown RBP eCLIP30.12■■■□□ 2.41
HLA-F-217ENST00000334668 ABCA8O94911 1581 aa30.11■■■□□ 2.41
HLA-F-217ENST00000334668 P3H3Q8IVL6 736 aa30.1■■■□□ 2.41
HLA-F-217ENST00000334668 PLB1Q6P1J6 1458 aa30.1■■■□□ 2.41
HLA-F-217ENST00000334668 TRHP20396 242 aaPredicted RBP30.08■■■□□ 2.41
HLA-F-217ENST00000334668 KDM5BQ9UGL1 1544 aa30.07■■■□□ 2.4
HLA-F-217ENST00000334668 RANGAP1P46060 587 aaPredicted RBP30.05■■■□□ 2.4
HLA-F-217ENST00000334668 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
HLA-F-217ENST00000334668 KIF13AQ9H1H9 1805 aa29.99■■■□□ 2.39
HLA-F-217ENST00000334668 ZCCHC11Q5TAX3 1644 aaKnown RBP29.99■■■□□ 2.39
HLA-F-217ENST00000334668 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
HLA-F-217ENST00000334668 ABCC10Q5T3U5 1492 aa29.97■■■□□ 2.39
HLA-F-217ENST00000334668 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
HLA-F-217ENST00000334668 ASXL2Q76L83 1435 aa29.93■■■□□ 2.38
HLA-F-217ENST00000334668 DIP2BQ9P265 1576 aa29.92■■■□□ 2.38
HLA-F-217ENST00000334668 ATP10BO94823 1461 aa29.85■■■□□ 2.37
HLA-F-217ENST00000334668 FAM69CQ0P6D2 419 aa29.84■■■□□ 2.37
HLA-F-217ENST00000334668 NUP153P49790 1475 aaKnown RBP29.84■■■□□ 2.37
HLA-F-217ENST00000334668 FMN1Q68DA7 1419 aa29.82■■■□□ 2.36
HLA-F-217ENST00000334668 GLI2P10070 1586 aa29.8■■■□□ 2.36
HLA-F-217ENST00000334668 WDR7Q9Y4E6 1490 aa29.8■■■□□ 2.36
HLA-F-217ENST00000334668 CLIP1P30622 1438 aa29.79■■■□□ 2.36
HLA-F-217ENST00000334668 EPRSP07814 1512 aaKnown RBP29.77■■■□□ 2.36
HLA-F-217ENST00000334668 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
HLA-F-217ENST00000334668 ARID3CA6NKF2 412 aa29.71■■■□□ 2.35
HLA-F-217ENST00000334668 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
HLA-F-217ENST00000334668 CEP162Q5TB80 1403 aa29.67■■■□□ 2.34
HLA-F-217ENST00000334668 TSPOAP1O95153 1857 aa29.65■■■□□ 2.34
HLA-F-217ENST00000334668 MAP3K4Q9Y6R4 1608 aa29.65■■■□□ 2.34
HLA-F-217ENST00000334668 PPRC1Q5VV67 1664 aaKnown RBP29.62■■■□□ 2.33
HLA-F-217ENST00000334668 CASKIN1Q8WXD9 1431 aa29.62■■■□□ 2.33
HLA-F-217ENST00000334668 CDK13Q14004 1512 aaKnown RBP29.6■■■□□ 2.33
HLA-F-217ENST00000334668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
HLA-F-217ENST00000334668 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
HLA-F-217ENST00000334668 KCNH8Q96L42 1107 aa29.59■■■□□ 2.33
HLA-F-217ENST00000334668 PCF11O94913 1555 aaKnown RBP29.59■■■□□ 2.33
HLA-F-217ENST00000334668 LRRIQ1Q96JM4 1722 aa29.58■■■□□ 2.33
HLA-F-217ENST00000334668 CFAP43Q8NDM7 1665 aa29.57■■■□□ 2.32
HLA-F-217ENST00000334668 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
HLA-F-217ENST00000334668 PLEKHD1A6NEE1 506 aa29.54■■■□□ 2.32
HLA-F-217ENST00000334668 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
HLA-F-217ENST00000334668 ATP1B4Q9UN42 357 aaPredicted RBP29.52■■■□□ 2.32
HLA-F-217ENST00000334668 CD109Q6YHK3 1445 aa29.5■■■□□ 2.31
HLA-F-217ENST00000334668 MAGI3Q5TCQ9 1506 aa29.49■■■□□ 2.31
HLA-F-217ENST00000334668 CCDC18Q5T9S5 1454 aa29.48■■■□□ 2.31
HLA-F-217ENST00000334668 TEX14Q8IWB6 1497 aa29.47■■■□□ 2.31
HLA-F-217ENST00000334668 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
HLA-F-217ENST00000334668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.3
HLA-F-217ENST00000334668 TROQ12816 1431 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-217ENST00000334668 KDM6BO15054 1643 aa29.38■■■□□ 2.29
HLA-F-217ENST00000334668 TTC37Q6PGP7 1564 aa29.35■■■□□ 2.29
HLA-F-217ENST00000334668 VPS8Q8N3P4 1428 aa29.33■■■□□ 2.29
HLA-F-217ENST00000334668 COL17A1Q9UMD9 1497 aaPredicted RBP29.31■■■□□ 2.28
HLA-F-217ENST00000334668 KIF14Q15058 1648 aa29.31■■■□□ 2.28
HLA-F-217ENST00000334668 PHLDB1Q86UU1 1377 aa29.27■■■□□ 2.28
HLA-F-217ENST00000334668 NEO1Q92859 1461 aa29.27■■■□□ 2.28
HLA-F-217ENST00000334668 ARAP3Q8WWN8 1544 aa29.24■■■□□ 2.27
HLA-F-217ENST00000334668 PLCH2O75038 1416 aa29.22■■■□□ 2.27
HLA-F-217ENST00000334668 MYO5CQ9NQX4 1742 aa29.21■■■□□ 2.27
HLA-F-217ENST00000334668 CFAP74Q9C0B2 1584 aa29.18■■■□□ 2.26
HLA-F-217ENST00000334668 FANCAO15360 1455 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms