RNA–Protein interactions for RNA: ENST00000334634.8

TRIM46-201, Transcript of tripartite motif containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM46, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-201ENST00000334634 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
TRIM46-201ENST00000334634 FBLN2P98095 1184 aa19.33■□□□□ 0.68
TRIM46-201ENST00000334634 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
TRIM46-201ENST00000334634 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
TRIM46-201ENST00000334634 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
TRIM46-201ENST00000334634 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
TRIM46-201ENST00000334634 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
TRIM46-201ENST00000334634 PELP1Q8IZL8 1130 aaKnown RBP19.22■□□□□ 0.67
TRIM46-201ENST00000334634 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
TRIM46-201ENST00000334634 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
TRIM46-201ENST00000334634 CUL7Q14999 1698 aa19.13■□□□□ 0.65
TRIM46-201ENST00000334634 PHLDB1Q86UU1 1377 aa19.12■□□□□ 0.65
TRIM46-201ENST00000334634 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
TRIM46-201ENST00000334634 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
TRIM46-201ENST00000334634 WDR62O43379 1518 aa19.08■□□□□ 0.64
TRIM46-201ENST00000334634 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
TRIM46-201ENST00000334634 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
TRIM46-201ENST00000334634 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
TRIM46-201ENST00000334634 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
TRIM46-201ENST00000334634 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
TRIM46-201ENST00000334634 IFT140Q96RY7 1462 aa19.06■□□□□ 0.64
TRIM46-201ENST00000334634 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
TRIM46-201ENST00000334634 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
TRIM46-201ENST00000334634 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
TRIM46-201ENST00000334634 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
TRIM46-201ENST00000334634 ADAMTS12P58397 1594 aa19■□□□□ 0.63
TRIM46-201ENST00000334634 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
TRIM46-201ENST00000334634 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
TRIM46-201ENST00000334634 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
TRIM46-201ENST00000334634 FMN1Q68DA7 1419 aa18.94■□□□□ 0.62
TRIM46-201ENST00000334634 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
TRIM46-201ENST00000334634 CHIC2Q9UKJ5 165 aa18.91■□□□□ 0.62
TRIM46-201ENST00000334634 IQGAP2Q13576 1575 aa18.91■□□□□ 0.62
TRIM46-201ENST00000334634 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
TRIM46-201ENST00000334634 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
TRIM46-201ENST00000334634 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
TRIM46-201ENST00000334634 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
TRIM46-201ENST00000334634 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
TRIM46-201ENST00000334634 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
TRIM46-201ENST00000334634 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
TRIM46-201ENST00000334634 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
TRIM46-201ENST00000334634 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
TRIM46-201ENST00000334634 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
TRIM46-201ENST00000334634 SIN3AQ96ST3 1273 aa18.83■□□□□ 0.6
TRIM46-201ENST00000334634 DISP1Q96F81 1524 aa18.82■□□□□ 0.6
TRIM46-201ENST00000334634 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
TRIM46-201ENST00000334634 CFAP43Q8NDM7 1665 aa18.82■□□□□ 0.6
TRIM46-201ENST00000334634 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
TRIM46-201ENST00000334634 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
TRIM46-201ENST00000334634 KIAA0586Q9BVV6 1533 aa18.81■□□□□ 0.6
TRIM46-201ENST00000334634 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
TRIM46-201ENST00000334634 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
TRIM46-201ENST00000334634 NCOA2Q15596 1464 aa18.8■□□□□ 0.6
TRIM46-201ENST00000334634 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
TRIM46-201ENST00000334634 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
TRIM46-201ENST00000334634 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
TRIM46-201ENST00000334634 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
TRIM46-201ENST00000334634 EPRSP07814 1512 aaKnown RBP18.76■□□□□ 0.59
TRIM46-201ENST00000334634 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
TRIM46-201ENST00000334634 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
TRIM46-201ENST00000334634 GTF3C3Q9Y5Q9 886 aa18.73■□□□□ 0.59
TRIM46-201ENST00000334634 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
TRIM46-201ENST00000334634 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
TRIM46-201ENST00000334634 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
TRIM46-201ENST00000334634 UGGT2Q9NYU1 1516 aa18.72■□□□□ 0.59
TRIM46-201ENST00000334634 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
TRIM46-201ENST00000334634 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.58
TRIM46-201ENST00000334634 ZNF316A6NFI3 1004 aaPredicted RBP18.7■□□□□ 0.58
TRIM46-201ENST00000334634 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
TRIM46-201ENST00000334634 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
TRIM46-201ENST00000334634 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
TRIM46-201ENST00000334634 NUP160Q12769 1436 aa18.65■□□□□ 0.58
TRIM46-201ENST00000334634 FOXD1Q16676 465 aa18.65■□□□□ 0.58
TRIM46-201ENST00000334634 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
TRIM46-201ENST00000334634 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
TRIM46-201ENST00000334634 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
TRIM46-201ENST00000334634 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
TRIM46-201ENST00000334634 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
TRIM46-201ENST00000334634 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
TRIM46-201ENST00000334634 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.57
TRIM46-201ENST00000334634 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
TRIM46-201ENST00000334634 RAPGEF6Q8TEU7 1601 aa18.57■□□□□ 0.56
TRIM46-201ENST00000334634 PTPN23Q9H3S7 1636 aa18.56■□□□□ 0.56
TRIM46-201ENST00000334634 KCNH8Q96L42 1107 aa18.56■□□□□ 0.56
TRIM46-201ENST00000334634 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
TRIM46-201ENST00000334634 CHD1O14646 1710 aa18.55■□□□□ 0.56
TRIM46-201ENST00000334634 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
TRIM46-201ENST00000334634 MIER1Q8N108 512 aa18.54■□□□□ 0.56
TRIM46-201ENST00000334634 PTPRGP23470 1445 aa18.54■□□□□ 0.56
TRIM46-201ENST00000334634 NAIPQ13075 1403 aa18.53■□□□□ 0.56
TRIM46-201ENST00000334634 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
TRIM46-201ENST00000334634 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
TRIM46-201ENST00000334634 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
TRIM46-201ENST00000334634 KIF14Q15058 1648 aa18.5■□□□□ 0.55
TRIM46-201ENST00000334634 KDM6BO15054 1643 aa18.5■□□□□ 0.55
TRIM46-201ENST00000334634 ATP10BO94823 1461 aa18.49■□□□□ 0.55
TRIM46-201ENST00000334634 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM46-201ENST00000334634 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
TRIM46-201ENST00000334634 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
TRIM46-201ENST00000334634 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms