RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
TSEN54-201ENST00000333213 FBLN2P98095 1184 aa36.93■■■■□ 3.5
TSEN54-201ENST00000333213 ARHGAP35Q9NRY4 1499 aa36.92■■■■□ 3.5
TSEN54-201ENST00000333213 ARAP1Q96P48 1450 aa36.85■■■■□ 3.49
TSEN54-201ENST00000333213 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
TSEN54-201ENST00000333213 NUP160Q12769 1436 aa36.79■■■■□ 3.48
TSEN54-201ENST00000333213 IQGAP2Q13576 1575 aa36.79■■■■□ 3.48
TSEN54-201ENST00000333213 KIAA0586Q9BVV6 1533 aa36.78■■■■□ 3.48
TSEN54-201ENST00000333213 CHD1O14646 1710 aa36.77■■■■□ 3.48
TSEN54-201ENST00000333213 VPS8Q8N3P4 1428 aa36.74■■■■□ 3.47
TSEN54-201ENST00000333213 EFCAB5A4FU69 1503 aa36.7■■■■□ 3.47
TSEN54-201ENST00000333213 P3H3Q8IVL6 736 aa36.69■■■■□ 3.46
TSEN54-201ENST00000333213 SAMD9Q5K651 1589 aa36.67■■■■□ 3.46
TSEN54-201ENST00000333213 FHOD3Q2V2M9 1422 aa36.63■■■■□ 3.45
TSEN54-201ENST00000333213 UGGT2Q9NYU1 1516 aa36.63■■■■□ 3.45
TSEN54-201ENST00000333213 DISP1Q96F81 1524 aa36.51■■■■□ 3.44
TSEN54-201ENST00000333213 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
TSEN54-201ENST00000333213 PPARGC1BQ86YN6 1023 aaKnown RBP36.47■■■■□ 3.43
TSEN54-201ENST00000333213 KIAA0556O60303 1618 aa36.44■■■■□ 3.42
TSEN54-201ENST00000333213 CLASP1Q7Z460 1538 aa36.37■■■■□ 3.41
TSEN54-201ENST00000333213 FMN1Q68DA7 1419 aa36.37■■■■□ 3.41
TSEN54-201ENST00000333213 PCF11O94913 1555 aaKnown RBP36.36■■■■□ 3.41
TSEN54-201ENST00000333213 SHROOM2Q13796 1616 aa36.32■■■■□ 3.4
TSEN54-201ENST00000333213 CASKIN1Q8WXD9 1431 aa36.29■■■■□ 3.4
TSEN54-201ENST00000333213 PRG4Q92954 1404 aaPredicted RBP36.28■■■■□ 3.4
TSEN54-201ENST00000333213 CARMIL2Q6F5E8 1435 aa36.27■■■■□ 3.4
TSEN54-201ENST00000333213 FYCO1Q9BQS8 1478 aa36.25■■■■□ 3.39
TSEN54-201ENST00000333213 APLP2Q06481 763 aa36.25■■■■□ 3.39
TSEN54-201ENST00000333213 TTBK1Q5TCY1 1321 aaPredicted RBP36.22■■■■□ 3.39
TSEN54-201ENST00000333213 ATP1B4Q9UN42 357 aaPredicted RBP36.18■■■■□ 3.38
TSEN54-201ENST00000333213 ERCC6L2Q5T890 1561 aa36.17■■■■□ 3.38
TSEN54-201ENST00000333213 KANK4Q5T7N3 995 aaPredicted RBP36.17■■■■□ 3.38
TSEN54-201ENST00000333213 OSCARQ8IYS5 282 aa36.16■■■■□ 3.38
TSEN54-201ENST00000333213 TIAM1Q13009 1591 aa36.13■■■■□ 3.37
TSEN54-201ENST00000333213 MAP3K1Q13233 1512 aa36.13■■■■□ 3.37
TSEN54-201ENST00000333213 LRRIQ1Q96JM4 1722 aa36.11■■■■□ 3.37
TSEN54-201ENST00000333213 TRIM26Q12899 539 aaPredicted RBP36.06■■■■□ 3.36
TSEN54-201ENST00000333213 CFAP43Q8NDM7 1665 aa36.06■■■■□ 3.36
TSEN54-201ENST00000333213 PLB1Q6P1J6 1458 aa36.05■■■■□ 3.36
TSEN54-201ENST00000333213 HECW1Q76N89 1606 aa36.02■■■■□ 3.36
TSEN54-201ENST00000333213 RAPGEF6Q8TEU7 1601 aa36.02■■■■□ 3.36
TSEN54-201ENST00000333213 PCGF6Q9BYE7 350 aa36■■■■□ 3.35
TSEN54-201ENST00000333213 PTPRGP23470 1445 aa36■■■■□ 3.35
TSEN54-201ENST00000333213 NUP153P49790 1475 aaKnown RBP35.98■■■■□ 3.35
TSEN54-201ENST00000333213 LRRC9Q6ZRR7 1453 aa35.98■■■■□ 3.35
TSEN54-201ENST00000333213 EPRSP07814 1512 aaKnown RBP35.97■■■■□ 3.35
TSEN54-201ENST00000333213 ABCA8O94911 1581 aa35.95■■■■□ 3.34
TSEN54-201ENST00000333213 ARID3CA6NKF2 412 aa35.92■■■■□ 3.34
TSEN54-201ENST00000333213 CDK13Q14004 1512 aaKnown RBP35.92■■■■□ 3.34
TSEN54-201ENST00000333213 CCDC18Q5T9S5 1454 aa35.91■■■■□ 3.34
TSEN54-201ENST00000333213 MAGI3Q5TCQ9 1506 aa35.84■■■■□ 3.33
TSEN54-201ENST00000333213 UACAQ9BZF9 1416 aa35.8■■■■□ 3.32
TSEN54-201ENST00000333213 MTUS2Q5JR59 1369 aa35.78■■■■□ 3.32
TSEN54-201ENST00000333213 ATP10BO94823 1461 aa35.73■■■■□ 3.31
TSEN54-201ENST00000333213 EHBP1L1Q8N3D4 1523 aa35.71■■■■□ 3.31
TSEN54-201ENST00000333213 ABCC2Q92887 1545 aa35.7■■■■□ 3.3
TSEN54-201ENST00000333213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.69■■■■□ 3.3
TSEN54-201ENST00000333213 HNRNPUL2Q1KMD3 747 aaKnown RBP35.69■■■■□ 3.3
TSEN54-201ENST00000333213 PHLDB1Q86UU1 1377 aa35.68■■■■□ 3.3
TSEN54-201ENST00000333213 UHRF1BP1LA0JNW5 1464 aa35.62■■■■□ 3.29
TSEN54-201ENST00000333213 NCOA2Q15596 1464 aa35.61■■■■□ 3.29
TSEN54-201ENST00000333213 ARHGEF11O15085 1522 aa35.6■■■■□ 3.29
TSEN54-201ENST00000333213 RRBP1Q9P2E9 1410 aaKnown RBP35.59■■■■□ 3.29
TSEN54-201ENST00000333213 SUPT6HQ7KZ85 1726 aaKnown RBP35.59■■■■□ 3.29
TSEN54-201ENST00000333213 CDK11AQ9UQ88 783 aaPredicted RBP35.58■■■■□ 3.29
TSEN54-201ENST00000333213 TROQ12816 1431 aaPredicted RBP35.55■■■■□ 3.28
TSEN54-201ENST00000333213 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
TSEN54-201ENST00000333213 KDM5BQ9UGL1 1544 aa35.51■■■■□ 3.27
TSEN54-201ENST00000333213 CCNB3Q8WWL7 1395 aa35.49■■■■□ 3.27
TSEN54-201ENST00000333213 PLEKHD1A6NEE1 506 aa35.48■■■■□ 3.27
TSEN54-201ENST00000333213 ZCCHC11Q5TAX3 1644 aaKnown RBP35.46■■■■□ 3.27
TSEN54-201ENST00000333213 KIF14Q15058 1648 aa35.44■■■■□ 3.26
TSEN54-201ENST00000333213 HRCP23327 699 aa35.44■■■■□ 3.26
TSEN54-201ENST00000333213 RIMBP3CA6NJZ7 1639 aa35.43■■■■□ 3.26
TSEN54-201ENST00000333213 RIMBP3BA6NNM3 1639 aa35.43■■■■□ 3.26
TSEN54-201ENST00000333213 RIMBP3Q9UFD9 1639 aa35.43■■■■□ 3.26
TSEN54-201ENST00000333213 MYOM3Q5VTT5 1437 aa35.42■■■■□ 3.26
TSEN54-201ENST00000333213 FGD6Q6ZV73 1430 aa35.4■■■■□ 3.26
TSEN54-201ENST00000333213 ABCC10Q5T3U5 1492 aa35.3■■■■□ 3.24
TSEN54-201ENST00000333213 FAM50AQ14320 339 aaKnown RBP35.28■■■■□ 3.24
TSEN54-201ENST00000333213 CYB5RLQ6IPT4 315 aa35.28■■■■□ 3.24
TSEN54-201ENST00000333213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.25■■■■□ 3.23
TSEN54-201ENST00000333213 GPATCH8Q9UKJ3 1502 aaKnown RBP35.25■■■■□ 3.23
TSEN54-201ENST00000333213 MIA2Q96PC5 1412 aa35.24■■■■□ 3.23
TSEN54-201ENST00000333213 PTPN23Q9H3S7 1636 aa35.23■■■■□ 3.23
TSEN54-201ENST00000333213 ITGAEP38570 1179 aa35.2■■■■□ 3.22
TSEN54-201ENST00000333213 TCOF1Q13428 1488 aaKnown RBP35.19■■■■□ 3.22
TSEN54-201ENST00000333213 KCNH8Q96L42 1107 aa35.19■■■■□ 3.22
TSEN54-201ENST00000333213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.18■■■■□ 3.22
TSEN54-201ENST00000333213 CDC42BPAQ5VT25 1732 aa35.17■■■■□ 3.22
TSEN54-201ENST00000333213 WDR7Q9Y4E6 1490 aa35.16■■■■□ 3.22
TSEN54-201ENST00000333213 ASXL2Q76L83 1435 aa35.15■■■■□ 3.22
TSEN54-201ENST00000333213 TTC37Q6PGP7 1564 aa35.15■■■■□ 3.22
TSEN54-201ENST00000333213 ITSN2Q9NZM3 1697 aa35.15■■■■□ 3.22
TSEN54-201ENST00000333213 NPM1P06748 294 aaKnown RBP eCLIP35.14■■■■□ 3.22
TSEN54-201ENST00000333213 ZNF644Q9H582 1327 aaPredicted RBP35.12■■■■□ 3.21
TSEN54-201ENST00000333213 CFDP1Q9UEE9 299 aaPredicted RBP35.11■■■■□ 3.21
TSEN54-201ENST00000333213 PTPRKQ15262 1439 aa35.07■■■■□ 3.2
TSEN54-201ENST00000333213 CDC42BPBQ9Y5S2 1711 aa35.04■■■■□ 3.2
TSEN54-201ENST00000333213 PREX2Q70Z35 1606 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms