RNA–Protein interactions for RNA: ENST00000331536.7

CROT-201, Transcript of carnitine O-octanoyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CROT, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-201ENST00000331536 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
CROT-201ENST00000331536 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
CROT-201ENST00000331536 TRIM26Q12899 539 aaPredicted RBP23.73■■□□□ 1.39
CROT-201ENST00000331536 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
CROT-201ENST00000331536 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
CROT-201ENST00000331536 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
CROT-201ENST00000331536 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
CROT-201ENST00000331536 ADAMTS12P58397 1594 aa23.64■■□□□ 1.37
CROT-201ENST00000331536 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
CROT-201ENST00000331536 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
CROT-201ENST00000331536 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
CROT-201ENST00000331536 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
CROT-201ENST00000331536 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
CROT-201ENST00000331536 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
CROT-201ENST00000331536 KANK4Q5T7N3 995 aaPredicted RBP23.46■■□□□ 1.35
CROT-201ENST00000331536 IQGAP2Q13576 1575 aa23.44■■□□□ 1.34
CROT-201ENST00000331536 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
CROT-201ENST00000331536 KIAA0586Q9BVV6 1533 aa23.43■■□□□ 1.34
CROT-201ENST00000331536 EFCAB5A4FU69 1503 aa23.4■■□□□ 1.34
CROT-201ENST00000331536 FMN1Q68DA7 1419 aa23.37■■□□□ 1.33
CROT-201ENST00000331536 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
CROT-201ENST00000331536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
CROT-201ENST00000331536 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
CROT-201ENST00000331536 NUP160Q12769 1436 aa23.32■■□□□ 1.32
CROT-201ENST00000331536 PCF11O94913 1555 aaKnown RBP23.28■■□□□ 1.32
CROT-201ENST00000331536 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
CROT-201ENST00000331536 CASKIN1Q8WXD9 1431 aa23.26■■□□□ 1.31
CROT-201ENST00000331536 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
CROT-201ENST00000331536 UGGT2Q9NYU1 1516 aa23.25■■□□□ 1.31
CROT-201ENST00000331536 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
CROT-201ENST00000331536 CHD1O14646 1710 aa23.22■■□□□ 1.31
CROT-201ENST00000331536 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
CROT-201ENST00000331536 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
CROT-201ENST00000331536 ITGAEP38570 1179 aa23.2■■□□□ 1.3
CROT-201ENST00000331536 MTUS2Q5JR59 1369 aa23.2■■□□□ 1.3
CROT-201ENST00000331536 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
CROT-201ENST00000331536 KIAA0556O60303 1618 aa23.16■■□□□ 1.3
CROT-201ENST00000331536 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
CROT-201ENST00000331536 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
CROT-201ENST00000331536 PLB1Q6P1J6 1458 aa23.09■■□□□ 1.29
CROT-201ENST00000331536 PTPRGP23470 1445 aa23.09■■□□□ 1.29
CROT-201ENST00000331536 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
CROT-201ENST00000331536 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
CROT-201ENST00000331536 CDK13Q14004 1512 aaKnown RBP23.05■■□□□ 1.28
CROT-201ENST00000331536 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
CROT-201ENST00000331536 CDK11AQ9UQ88 783 aaPredicted RBP23.03■■□□□ 1.28
CROT-201ENST00000331536 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
CROT-201ENST00000331536 HECW1Q76N89 1606 aa23.01■■□□□ 1.27
CROT-201ENST00000331536 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
CROT-201ENST00000331536 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
CROT-201ENST00000331536 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
CROT-201ENST00000331536 HRCP23327 699 aa22.98■■□□□ 1.27
CROT-201ENST00000331536 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
CROT-201ENST00000331536 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
CROT-201ENST00000331536 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
CROT-201ENST00000331536 RAPGEF6Q8TEU7 1601 aa22.95■■□□□ 1.26
CROT-201ENST00000331536 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
CROT-201ENST00000331536 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
CROT-201ENST00000331536 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
CROT-201ENST00000331536 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
CROT-201ENST00000331536 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
CROT-201ENST00000331536 MAGI3Q5TCQ9 1506 aa22.89■■□□□ 1.25
CROT-201ENST00000331536 EHBP1L1Q8N3D4 1523 aa22.86■■□□□ 1.25
CROT-201ENST00000331536 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
CROT-201ENST00000331536 SHROOM2Q13796 1616 aa22.83■■□□□ 1.25
CROT-201ENST00000331536 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
CROT-201ENST00000331536 KCNH8Q96L42 1107 aa22.83■■□□□ 1.25
CROT-201ENST00000331536 ATP10BO94823 1461 aa22.82■■□□□ 1.24
CROT-201ENST00000331536 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
CROT-201ENST00000331536 ABCA8O94911 1581 aa22.8■■□□□ 1.24
CROT-201ENST00000331536 MYOM3Q5VTT5 1437 aa22.79■■□□□ 1.24
CROT-201ENST00000331536 SUPT6HQ7KZ85 1726 aaKnown RBP22.79■■□□□ 1.24
CROT-201ENST00000331536 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
CROT-201ENST00000331536 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
CROT-201ENST00000331536 CFDP1Q9UEE9 299 aaPredicted RBP22.76■■□□□ 1.23
CROT-201ENST00000331536 ZNF644Q9H582 1327 aaPredicted RBP22.73■■□□□ 1.23
CROT-201ENST00000331536 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
CROT-201ENST00000331536 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
CROT-201ENST00000331536 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
CROT-201ENST00000331536 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
CROT-201ENST00000331536 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
CROT-201ENST00000331536 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
CROT-201ENST00000331536 KIF14Q15058 1648 aa22.62■■□□□ 1.21
CROT-201ENST00000331536 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
CROT-201ENST00000331536 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
CROT-201ENST00000331536 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
CROT-201ENST00000331536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.58■■□□□ 1.21
CROT-201ENST00000331536 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CROT-201ENST00000331536 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
CROT-201ENST00000331536 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
CROT-201ENST00000331536 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
CROT-201ENST00000331536 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
CROT-201ENST00000331536 KDM5BQ9UGL1 1544 aa22.51■■□□□ 1.19
CROT-201ENST00000331536 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
CROT-201ENST00000331536 ADCY10Q96PN6 1610 aa22.48■■□□□ 1.19
CROT-201ENST00000331536 TRIM52Q96A61 297 aa22.48■■□□□ 1.19
CROT-201ENST00000331536 TCOF1Q13428 1488 aaKnown RBP22.48■■□□□ 1.19
CROT-201ENST00000331536 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
CROT-201ENST00000331536 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
CROT-201ENST00000331536 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms