RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
CPNE8-201ENST00000331366 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
CPNE8-201ENST00000331366 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
CPNE8-201ENST00000331366 TOPBP1Q92547 1522 aa13.27□□□□□ -0.28
CPNE8-201ENST00000331366 AKNAQ7Z591 1439 aa13.27□□□□□ -0.29
CPNE8-201ENST00000331366 PBRM1Q86U86 1689 aa13.27□□□□□ -0.29
CPNE8-201ENST00000331366 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-201ENST00000331366 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
CPNE8-201ENST00000331366 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
CPNE8-201ENST00000331366 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
CPNE8-201ENST00000331366 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.29
CPNE8-201ENST00000331366 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.29
CPNE8-201ENST00000331366 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
CPNE8-201ENST00000331366 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
CPNE8-201ENST00000331366 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
CPNE8-201ENST00000331366 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
CPNE8-201ENST00000331366 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
CPNE8-201ENST00000331366 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
CPNE8-201ENST00000331366 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
CPNE8-201ENST00000331366 DIEXFQ68CQ4 756 aaKnown RBP13.17□□□□□ -0.3
CPNE8-201ENST00000331366 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
CPNE8-201ENST00000331366 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPNE8-201ENST00000331366 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
CPNE8-201ENST00000331366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
CPNE8-201ENST00000331366 PTPN23Q9H3S7 1636 aa13.14□□□□□ -0.31
CPNE8-201ENST00000331366 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
CPNE8-201ENST00000331366 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
CPNE8-201ENST00000331366 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
CPNE8-201ENST00000331366 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
CPNE8-201ENST00000331366 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
CPNE8-201ENST00000331366 CROCC2H7BZ55 1655 aa13.1□□□□□ -0.31
CPNE8-201ENST00000331366 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
CPNE8-201ENST00000331366 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
CPNE8-201ENST00000331366 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
CPNE8-201ENST00000331366 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
CPNE8-201ENST00000331366 WDR62O43379 1518 aa13.06□□□□□ -0.32
CPNE8-201ENST00000331366 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
CPNE8-201ENST00000331366 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
CPNE8-201ENST00000331366 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
CPNE8-201ENST00000331366 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
CPNE8-201ENST00000331366 NESP48681 1621 aa13.01□□□□□ -0.33
CPNE8-201ENST00000331366 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
CPNE8-201ENST00000331366 MIA2Q96PC5 1412 aa13□□□□□ -0.33
CPNE8-201ENST00000331366 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
CPNE8-201ENST00000331366 ITSN2Q9NZM3 1697 aa12.99□□□□□ -0.33
CPNE8-201ENST00000331366 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
CPNE8-201ENST00000331366 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
CPNE8-201ENST00000331366 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
CPNE8-201ENST00000331366 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
CPNE8-201ENST00000331366 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.34
CPNE8-201ENST00000331366 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
CPNE8-201ENST00000331366 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
CPNE8-201ENST00000331366 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-201ENST00000331366 KDM5DQ9BY66 1539 aa12.94□□□□□ -0.34
CPNE8-201ENST00000331366 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
CPNE8-201ENST00000331366 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
CPNE8-201ENST00000331366 RAD54L2Q9Y4B4 1467 aa12.92□□□□□ -0.34
CPNE8-201ENST00000331366 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
CPNE8-201ENST00000331366 NAIPQ13075 1403 aa12.9□□□□□ -0.34
CPNE8-201ENST00000331366 APLP2Q06481 763 aa12.9□□□□□ -0.34
CPNE8-201ENST00000331366 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
CPNE8-201ENST00000331366 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
CPNE8-201ENST00000331366 LAMC1P11047 1609 aa12.87□□□□□ -0.35
CPNE8-201ENST00000331366 MBD5Q9P267 1494 aa12.87□□□□□ -0.35
CPNE8-201ENST00000331366 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
CPNE8-201ENST00000331366 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
CPNE8-201ENST00000331366 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
CPNE8-201ENST00000331366 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
CPNE8-201ENST00000331366 E9PCH4 1651 aa12.84□□□□□ -0.35
CPNE8-201ENST00000331366 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
CPNE8-201ENST00000331366 MIER1Q8N108 512 aa12.83□□□□□ -0.35
CPNE8-201ENST00000331366 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
CPNE8-201ENST00000331366 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
CPNE8-201ENST00000331366 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
CPNE8-201ENST00000331366 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
CPNE8-201ENST00000331366 MAST1Q9Y2H9 1570 aa12.82□□□□□ -0.36
CPNE8-201ENST00000331366 GTF3C3Q9Y5Q9 886 aa12.82□□□□□ -0.36
CPNE8-201ENST00000331366 ARHGEF5Q12774 1597 aa12.81□□□□□ -0.36
CPNE8-201ENST00000331366 CDC42BPAQ5VT25 1732 aa12.81□□□□□ -0.36
CPNE8-201ENST00000331366 KIF14Q15058 1648 aa12.81□□□□□ -0.36
CPNE8-201ENST00000331366 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
CPNE8-201ENST00000331366 MAGI1Q96QZ7 1491 aaPredicted RBP12.8□□□□□ -0.36
CPNE8-201ENST00000331366 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
CPNE8-201ENST00000331366 TEX14Q8IWB6 1497 aa12.8□□□□□ -0.36
CPNE8-201ENST00000331366 KDM6BO15054 1643 aa12.79□□□□□ -0.36
CPNE8-201ENST00000331366 ABCA8O94911 1581 aa12.78□□□□□ -0.36
CPNE8-201ENST00000331366 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
CPNE8-201ENST00000331366 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
CPNE8-201ENST00000331366 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
CPNE8-201ENST00000331366 RPRD2Q5VT52 1461 aaKnown RBP12.75□□□□□ -0.37
CPNE8-201ENST00000331366 NEURL4Q96JN8 1562 aa12.74□□□□□ -0.37
CPNE8-201ENST00000331366 NUP160Q12769 1436 aa12.73□□□□□ -0.37
CPNE8-201ENST00000331366 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
CPNE8-201ENST00000331366 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
CPNE8-201ENST00000331366 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
CPNE8-201ENST00000331366 UNC13BO14795 1591 aa12.72□□□□□ -0.37
CPNE8-201ENST00000331366 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
CPNE8-201ENST00000331366 GRIN2AQ12879 1464 aa12.71□□□□□ -0.38
CPNE8-201ENST00000331366 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.38
CPNE8-201ENST00000331366 PTPRGP23470 1445 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms