RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
BEST3-202ENST00000330891 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
BEST3-202ENST00000330891 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
BEST3-202ENST00000330891 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
BEST3-202ENST00000330891 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
BEST3-202ENST00000330891 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
BEST3-202ENST00000330891 CUX1P39880 1505 aa10.23□□□□□ -0.77
BEST3-202ENST00000330891 CCNB3Q8WWL7 1395 aa10.19□□□□□ -0.78
BEST3-202ENST00000330891 IGF1RP08069 1367 aa10.19□□□□□ -0.78
BEST3-202ENST00000330891 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
BEST3-202ENST00000330891 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
BEST3-202ENST00000330891 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
BEST3-202ENST00000330891 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
BEST3-202ENST00000330891 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
BEST3-202ENST00000330891 URB2Q14146 1524 aaKnown RBP10.16□□□□□ -0.78
BEST3-202ENST00000330891 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
BEST3-202ENST00000330891 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
BEST3-202ENST00000330891 FHOD3Q2V2M9 1422 aa10.14□□□□□ -0.79
BEST3-202ENST00000330891 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
BEST3-202ENST00000330891 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
BEST3-202ENST00000330891 NESP48681 1621 aa10.13□□□□□ -0.79
BEST3-202ENST00000330891 CLASP1Q7Z460 1538 aa10.13□□□□□ -0.79
BEST3-202ENST00000330891 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
BEST3-202ENST00000330891 RRP7BPQ9NSQ0 103 aa10.12□□□□□ -0.79
BEST3-202ENST00000330891 CADPSQ9ULU8 1353 aa10.12□□□□□ -0.79
BEST3-202ENST00000330891 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
BEST3-202ENST00000330891 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
BEST3-202ENST00000330891 CUL7Q14999 1698 aa10.09□□□□□ -0.79
BEST3-202ENST00000330891 FOXD1Q16676 465 aa10.09□□□□□ -0.79
BEST3-202ENST00000330891 SUPT16HQ9Y5B9 1047 aaKnown RBP10.08□□□□□ -0.8
BEST3-202ENST00000330891 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
BEST3-202ENST00000330891 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
BEST3-202ENST00000330891 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
BEST3-202ENST00000330891 ERICH3Q5RHP9 1530 aa10.06□□□□□ -0.8
BEST3-202ENST00000330891 IRX6P78412 446 aaPredicted RBP10.06□□□□□ -0.8
BEST3-202ENST00000330891 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
BEST3-202ENST00000330891 FKBP8Q14318 412 aa10.05□□□□□ -0.8
BEST3-202ENST00000330891 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
BEST3-202ENST00000330891 SETD5Q9C0A6 1442 aa10.04□□□□□ -0.8
BEST3-202ENST00000330891 RRBP1Q9P2E9 1410 aaKnown RBP10.04□□□□□ -0.8
BEST3-202ENST00000330891 FANCD2Q9BXW9 1451 aa10.03□□□□□ -0.8
BEST3-202ENST00000330891 NEFLP07196 543 aa10.03□□□□□ -0.8
BEST3-202ENST00000330891 FBLN2P98095 1184 aa10.03□□□□□ -0.8
BEST3-202ENST00000330891 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
BEST3-202ENST00000330891 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.81
BEST3-202ENST00000330891 ZNF326Q5BKZ1 582 aaKnown RBP10□□□□□ -0.81
BEST3-202ENST00000330891 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
BEST3-202ENST00000330891 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
BEST3-202ENST00000330891 CHD1O14646 1710 aa9.99□□□□□ -0.81
BEST3-202ENST00000330891 TONSLQ96HA7 1378 aa9.98□□□□□ -0.81
BEST3-202ENST00000330891 ANP32CO43423 234 aa9.98□□□□□ -0.81
BEST3-202ENST00000330891 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
BEST3-202ENST00000330891 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
BEST3-202ENST00000330891 SAMD9Q5K651 1589 aa9.96□□□□□ -0.81
BEST3-202ENST00000330891 MAPKBP1O60336 1514 aa9.95□□□□□ -0.82
BEST3-202ENST00000330891 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
BEST3-202ENST00000330891 TIAM1Q13009 1591 aa9.94□□□□□ -0.82
BEST3-202ENST00000330891 HNRNPUQ00839 825 aaKnown RBP eCLIP9.94□□□□□ -0.82
BEST3-202ENST00000330891 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
BEST3-202ENST00000330891 FHAD1B1AJZ9 1412 aa9.93□□□□□ -0.82
BEST3-202ENST00000330891 IFT140Q96RY7 1462 aa9.93□□□□□ -0.82
BEST3-202ENST00000330891 PTPRKQ15262 1439 aa9.93□□□□□ -0.82
BEST3-202ENST00000330891 PCF11O94913 1555 aaKnown RBP9.93□□□□□ -0.82
BEST3-202ENST00000330891 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
BEST3-202ENST00000330891 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
BEST3-202ENST00000330891 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
BEST3-202ENST00000330891 AQRO60306 1485 aaKnown RBP eCLIP9.9□□□□□ -0.82
BEST3-202ENST00000330891 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.83
BEST3-202ENST00000330891 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
BEST3-202ENST00000330891 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
BEST3-202ENST00000330891 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
BEST3-202ENST00000330891 FGD6Q6ZV73 1430 aa9.87□□□□□ -0.83
BEST3-202ENST00000330891 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
BEST3-202ENST00000330891 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
BEST3-202ENST00000330891 CCDC18Q5T9S5 1454 aa9.85□□□□□ -0.83
BEST3-202ENST00000330891 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
BEST3-202ENST00000330891 MPHOSPH9Q99550 1183 aa9.85□□□□□ -0.83
BEST3-202ENST00000330891 SLC4A1APQ9BWU0 796 aaKnown RBP9.85□□□□□ -0.83
BEST3-202ENST00000330891 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
BEST3-202ENST00000330891 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
BEST3-202ENST00000330891 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
BEST3-202ENST00000330891 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
BEST3-202ENST00000330891 NCOA2Q15596 1464 aa9.83□□□□□ -0.84
BEST3-202ENST00000330891 CEP170Q5SW79 1584 aa9.83□□□□□ -0.84
BEST3-202ENST00000330891 NUP160Q12769 1436 aa9.83□□□□□ -0.84
BEST3-202ENST00000330891 FMN1Q68DA7 1419 aa9.83□□□□□ -0.84
BEST3-202ENST00000330891 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
BEST3-202ENST00000330891 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
BEST3-202ENST00000330891 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
BEST3-202ENST00000330891 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
BEST3-202ENST00000330891 CDK13Q14004 1512 aaKnown RBP9.8□□□□□ -0.84
BEST3-202ENST00000330891 NAIPQ13075 1403 aa9.8□□□□□ -0.84
BEST3-202ENST00000330891 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
BEST3-202ENST00000330891 ADCY10Q96PN6 1610 aa9.79□□□□□ -0.84
BEST3-202ENST00000330891 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
BEST3-202ENST00000330891 KDM5BQ9UGL1 1544 aa9.79□□□□□ -0.84
BEST3-202ENST00000330891 MYOM3Q5VTT5 1437 aa9.78□□□□□ -0.84
BEST3-202ENST00000330891 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
BEST3-202ENST00000330891 CFDP1Q9UEE9 299 aaPredicted RBP9.77□□□□□ -0.84
BEST3-202ENST00000330891 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms