RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.61
RAB28-202ENST00000330852 PRG4Q92954 1404 aaPredicted RBP31.38■■■□□ 2.61
RAB28-202ENST00000330852 KIAA0586Q9BVV6 1533 aa31.29■■■□□ 2.6
RAB28-202ENST00000330852 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
RAB28-202ENST00000330852 NPM1P06748 294 aaKnown RBP eCLIP31.04■■■□□ 2.56
RAB28-202ENST00000330852 IQGAP2Q13576 1575 aa31.01■■■□□ 2.56
RAB28-202ENST00000330852 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
RAB28-202ENST00000330852 RAPGEF2Q9Y4G8 1499 aa31■■■□□ 2.55
RAB28-202ENST00000330852 KIF13AQ9H1H9 1805 aa30.99■■■□□ 2.55
RAB28-202ENST00000330852 ADCY10Q96PN6 1610 aa30.99■■■□□ 2.55
RAB28-202ENST00000330852 MAPKBP1O60336 1514 aa30.97■■■□□ 2.55
RAB28-202ENST00000330852 PTPRGP23470 1445 aa30.94■■■□□ 2.54
RAB28-202ENST00000330852 TNIKQ9UKE5 1360 aa30.92■■■□□ 2.54
RAB28-202ENST00000330852 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
RAB28-202ENST00000330852 UGGT2Q9NYU1 1516 aa30.84■■■□□ 2.53
RAB28-202ENST00000330852 FAM69CQ0P6D2 419 aa30.81■■■□□ 2.52
RAB28-202ENST00000330852 DISP1Q96F81 1524 aa30.81■■■□□ 2.52
RAB28-202ENST00000330852 DIP2BQ9P265 1576 aa30.8■■■□□ 2.52
RAB28-202ENST00000330852 CTTNBP2Q8WZ74 1663 aa30.76■■■□□ 2.52
RAB28-202ENST00000330852 UHRF1BP1LA0JNW5 1464 aa30.76■■■□□ 2.52
RAB28-202ENST00000330852 ABCC2Q92887 1545 aa30.76■■■□□ 2.51
RAB28-202ENST00000330852 TTBK1Q5TCY1 1321 aaPredicted RBP30.73■■■□□ 2.51
RAB28-202ENST00000330852 PRXQ9BXM0 1461 aa30.73■■■□□ 2.51
RAB28-202ENST00000330852 UACAQ9BZF9 1416 aa30.72■■■□□ 2.51
RAB28-202ENST00000330852 KIAA0556O60303 1618 aa30.71■■■□□ 2.51
RAB28-202ENST00000330852 PLB1Q6P1J6 1458 aa30.65■■■□□ 2.5
RAB28-202ENST00000330852 GOLGA3Q08378 1498 aa30.64■■■□□ 2.5
RAB28-202ENST00000330852 KDM5BQ9UGL1 1544 aa30.6■■■□□ 2.49
RAB28-202ENST00000330852 ASXL2Q76L83 1435 aa30.6■■■□□ 2.49
RAB28-202ENST00000330852 TSPOAP1O95153 1857 aa30.57■■■□□ 2.48
RAB28-202ENST00000330852 GLI2P10070 1586 aa30.56■■■□□ 2.48
RAB28-202ENST00000330852 CSRNP3Q8WYN3 585 aa30.55■■■□□ 2.48
RAB28-202ENST00000330852 EEA1Q15075 1411 aa30.53■■■□□ 2.48
RAB28-202ENST00000330852 ZCCHC11Q5TAX3 1644 aaKnown RBP30.5■■■□□ 2.47
RAB28-202ENST00000330852 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
RAB28-202ENST00000330852 KDM6BO15054 1643 aa30.48■■■□□ 2.47
RAB28-202ENST00000330852 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
RAB28-202ENST00000330852 ABCA8O94911 1581 aa30.43■■■□□ 2.46
RAB28-202ENST00000330852 EPRSP07814 1512 aaKnown RBP30.42■■■□□ 2.46
RAB28-202ENST00000330852 PPRC1Q5VV67 1664 aaKnown RBP30.39■■■□□ 2.46
RAB28-202ENST00000330852 MAP3K4Q9Y6R4 1608 aa30.37■■■□□ 2.45
RAB28-202ENST00000330852 WDR7Q9Y4E6 1490 aa30.36■■■□□ 2.45
RAB28-202ENST00000330852 SAMD9Q5K651 1589 aa30.31■■■□□ 2.44
RAB28-202ENST00000330852 TEX14Q8IWB6 1497 aa30.3■■■□□ 2.44
RAB28-202ENST00000330852 P3H3Q8IVL6 736 aa30.24■■■□□ 2.43
RAB28-202ENST00000330852 KIF21BO75037 1637 aa30.23■■■□□ 2.43
RAB28-202ENST00000330852 CFAP43Q8NDM7 1665 aa30.22■■■□□ 2.43
RAB28-202ENST00000330852 ATP10BO94823 1461 aa30.16■■■□□ 2.42
RAB28-202ENST00000330852 MAGI3Q5TCQ9 1506 aa30.16■■■□□ 2.42
RAB28-202ENST00000330852 RAPGEF6Q8TEU7 1601 aa30.15■■■□□ 2.42
RAB28-202ENST00000330852 CD109Q6YHK3 1445 aa30.15■■■□□ 2.42
RAB28-202ENST00000330852 KCNH8Q96L42 1107 aa30.15■■■□□ 2.42
RAB28-202ENST00000330852 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
RAB28-202ENST00000330852 COL17A1Q9UMD9 1497 aaPredicted RBP30.12■■■□□ 2.41
RAB28-202ENST00000330852 EFCAB5A4FU69 1503 aa30.09■■■□□ 2.41
RAB28-202ENST00000330852 KDM4FA0A1W2PPD8 638 aa30.03■■■□□ 2.4
RAB28-202ENST00000330852 ARID3CA6NKF2 412 aa30.03■■■□□ 2.4
RAB28-202ENST00000330852 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
RAB28-202ENST00000330852 RANGAP1P46060 587 aaPredicted RBP30.02■■■□□ 2.4
RAB28-202ENST00000330852 NUP153P49790 1475 aaKnown RBP30■■■□□ 2.39
RAB28-202ENST00000330852 ABCA9Q8IUA7 1624 aa30■■■□□ 2.39
RAB28-202ENST00000330852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
RAB28-202ENST00000330852 HNRNPUL2Q1KMD3 747 aaKnown RBP29.96■■■□□ 2.39
RAB28-202ENST00000330852 PHLDB1Q86UU1 1377 aa29.95■■■□□ 2.39
RAB28-202ENST00000330852 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
RAB28-202ENST00000330852 ARAP3Q8WWN8 1544 aa29.92■■■□□ 2.38
RAB28-202ENST00000330852 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
RAB28-202ENST00000330852 ADGRL1O94910 1474 aa29.86■■■□□ 2.37
RAB28-202ENST00000330852 NEO1Q92859 1461 aa29.84■■■□□ 2.37
RAB28-202ENST00000330852 FMN1Q68DA7 1419 aa29.82■■■□□ 2.36
RAB28-202ENST00000330852 ARHGAP35Q9NRY4 1499 aa29.78■■■□□ 2.36
RAB28-202ENST00000330852 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
RAB28-202ENST00000330852 HECW1Q76N89 1606 aa29.72■■■□□ 2.35
RAB28-202ENST00000330852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.7■■■□□ 2.34
RAB28-202ENST00000330852 CFAP74Q9C0B2 1584 aa29.7■■■□□ 2.34
RAB28-202ENST00000330852 CDK13Q14004 1512 aaKnown RBP29.69■■■□□ 2.34
RAB28-202ENST00000330852 RAPGEF3O95398 923 aa29.65■■■□□ 2.34
RAB28-202ENST00000330852 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
RAB28-202ENST00000330852 FANCAO15360 1455 aa29.63■■■□□ 2.33
RAB28-202ENST00000330852 TTC37Q6PGP7 1564 aa29.63■■■□□ 2.33
RAB28-202ENST00000330852 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
RAB28-202ENST00000330852 AKNAQ7Z591 1439 aa29.62■■■□□ 2.33
RAB28-202ENST00000330852 FRMPD1Q5SYB0 1578 aa29.61■■■□□ 2.33
RAB28-202ENST00000330852 DENND4BO75064 1496 aaPredicted RBP29.6■■■□□ 2.33
RAB28-202ENST00000330852 RICTORQ6R327 1708 aa29.57■■■□□ 2.32
RAB28-202ENST00000330852 PLCH2O75038 1416 aa29.55■■■□□ 2.32
RAB28-202ENST00000330852 MYO5CQ9NQX4 1742 aa29.52■■■□□ 2.32
RAB28-202ENST00000330852 TROQ12816 1431 aaPredicted RBP29.51■■■□□ 2.31
RAB28-202ENST00000330852 LRRIQ1Q96JM4 1722 aa29.5■■■□□ 2.31
RAB28-202ENST00000330852 KIF14Q15058 1648 aa29.5■■■□□ 2.31
RAB28-202ENST00000330852 CLIP1P30622 1438 aa29.5■■■□□ 2.31
RAB28-202ENST00000330852 CASKIN1Q8WXD9 1431 aa29.49■■■□□ 2.31
RAB28-202ENST00000330852 ZMYM4Q5VZL5 1548 aa29.48■■■□□ 2.31
RAB28-202ENST00000330852 ARHGEF40Q8TER5 1519 aa29.48■■■□□ 2.31
RAB28-202ENST00000330852 CCDC18Q5T9S5 1454 aa29.47■■■□□ 2.31
RAB28-202ENST00000330852 ADAMTSL3P82987 1691 aa29.46■■■□□ 2.31
RAB28-202ENST00000330852 EFCAB2Q5VUJ9 269 aa29.46■■■□□ 2.31
RAB28-202ENST00000330852 MAGI2Q86UL8 1455 aa29.45■■■□□ 2.31
RAB28-202ENST00000330852 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
RAB28-202ENST00000330852 PCF11O94913 1555 aaKnown RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms