RNA–Protein interactions for RNA: ENST00000330554.4

TPM3P8-201, Transcript of tropomyosin 3 pseudogene 8, humanhuman

BASIC

Gene TPM3P8, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P8-201ENST00000330554 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
TPM3P8-201ENST00000330554 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
TPM3P8-201ENST00000330554 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
TPM3P8-201ENST00000330554 KIAA0586Q9BVV6 1533 aa24.98■■□□□ 1.59
TPM3P8-201ENST00000330554 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
TPM3P8-201ENST00000330554 PRG4Q92954 1404 aaPredicted RBP24.93■■□□□ 1.58
TPM3P8-201ENST00000330554 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
TPM3P8-201ENST00000330554 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
TPM3P8-201ENST00000330554 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
TPM3P8-201ENST00000330554 IQGAP2Q13576 1575 aa24.8■■□□□ 1.56
TPM3P8-201ENST00000330554 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
TPM3P8-201ENST00000330554 CARMIL2Q6F5E8 1435 aa24.8■■□□□ 1.56
TPM3P8-201ENST00000330554 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
TPM3P8-201ENST00000330554 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
TPM3P8-201ENST00000330554 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
TPM3P8-201ENST00000330554 PTPRGP23470 1445 aa24.69■■□□□ 1.54
TPM3P8-201ENST00000330554 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
TPM3P8-201ENST00000330554 KIF21BO75037 1637 aa24.67■■□□□ 1.54
TPM3P8-201ENST00000330554 UGGT2Q9NYU1 1516 aa24.66■■□□□ 1.54
TPM3P8-201ENST00000330554 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
TPM3P8-201ENST00000330554 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
TPM3P8-201ENST00000330554 GOLGA3Q08378 1498 aa24.64■■□□□ 1.54
TPM3P8-201ENST00000330554 DISP1Q96F81 1524 aa24.61■■□□□ 1.53
TPM3P8-201ENST00000330554 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
TPM3P8-201ENST00000330554 TRHP20396 242 aaPredicted RBP24.58■■□□□ 1.53
TPM3P8-201ENST00000330554 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
TPM3P8-201ENST00000330554 UACAQ9BZF9 1416 aa24.48■■□□□ 1.51
TPM3P8-201ENST00000330554 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
TPM3P8-201ENST00000330554 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.5
TPM3P8-201ENST00000330554 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
TPM3P8-201ENST00000330554 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
TPM3P8-201ENST00000330554 SAMD9Q5K651 1589 aa24.37■■□□□ 1.49
TPM3P8-201ENST00000330554 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
TPM3P8-201ENST00000330554 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
TPM3P8-201ENST00000330554 PLB1Q6P1J6 1458 aa24.35■■□□□ 1.49
TPM3P8-201ENST00000330554 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
TPM3P8-201ENST00000330554 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
TPM3P8-201ENST00000330554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
TPM3P8-201ENST00000330554 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
TPM3P8-201ENST00000330554 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
TPM3P8-201ENST00000330554 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
TPM3P8-201ENST00000330554 ABCA8O94911 1581 aa24.26■■□□□ 1.47
TPM3P8-201ENST00000330554 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
TPM3P8-201ENST00000330554 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
TPM3P8-201ENST00000330554 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
TPM3P8-201ENST00000330554 CLIP1P30622 1438 aa24.24■■□□□ 1.47
TPM3P8-201ENST00000330554 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
TPM3P8-201ENST00000330554 ASXL2Q76L83 1435 aa24.23■■□□□ 1.47
TPM3P8-201ENST00000330554 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
TPM3P8-201ENST00000330554 KCNH8Q96L42 1107 aa24.18■■□□□ 1.46
TPM3P8-201ENST00000330554 RAPGEF6Q8TEU7 1601 aa24.17■■□□□ 1.46
TPM3P8-201ENST00000330554 ATP10BO94823 1461 aa24.15■■□□□ 1.46
TPM3P8-201ENST00000330554 ZCCHC11Q5TAX3 1644 aaKnown RBP24.15■■□□□ 1.46
TPM3P8-201ENST00000330554 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
TPM3P8-201ENST00000330554 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
TPM3P8-201ENST00000330554 NUP153P49790 1475 aaKnown RBP24.11■■□□□ 1.45
TPM3P8-201ENST00000330554 WDR7Q9Y4E6 1490 aa24.09■■□□□ 1.45
TPM3P8-201ENST00000330554 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
TPM3P8-201ENST00000330554 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
TPM3P8-201ENST00000330554 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
TPM3P8-201ENST00000330554 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
TPM3P8-201ENST00000330554 HECW1Q76N89 1606 aa24■■□□□ 1.43
TPM3P8-201ENST00000330554 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
TPM3P8-201ENST00000330554 GLI2P10070 1586 aa23.98■■□□□ 1.43
TPM3P8-201ENST00000330554 CDK13Q14004 1512 aaKnown RBP23.95■■□□□ 1.43
TPM3P8-201ENST00000330554 CD109Q6YHK3 1445 aa23.93■■□□□ 1.42
TPM3P8-201ENST00000330554 FYCO1Q9BQS8 1478 aa23.92■■□□□ 1.42
TPM3P8-201ENST00000330554 CCDC18Q5T9S5 1454 aa23.9■■□□□ 1.42
TPM3P8-201ENST00000330554 PCF11O94913 1555 aaKnown RBP23.9■■□□□ 1.42
TPM3P8-201ENST00000330554 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
TPM3P8-201ENST00000330554 TEX14Q8IWB6 1497 aa23.87■■□□□ 1.41
TPM3P8-201ENST00000330554 MAP3K4Q9Y6R4 1608 aa23.82■■□□□ 1.4
TPM3P8-201ENST00000330554 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
TPM3P8-201ENST00000330554 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
TPM3P8-201ENST00000330554 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
TPM3P8-201ENST00000330554 APLP2Q06481 763 aa23.8■■□□□ 1.4
TPM3P8-201ENST00000330554 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
TPM3P8-201ENST00000330554 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
TPM3P8-201ENST00000330554 ABCA9Q8IUA7 1624 aa23.76■■□□□ 1.39
TPM3P8-201ENST00000330554 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
TPM3P8-201ENST00000330554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.73■■□□□ 1.39
TPM3P8-201ENST00000330554 PPRC1Q5VV67 1664 aaKnown RBP23.71■■□□□ 1.39
TPM3P8-201ENST00000330554 KDM6BO15054 1643 aa23.71■■□□□ 1.39
TPM3P8-201ENST00000330554 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
TPM3P8-201ENST00000330554 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.39
TPM3P8-201ENST00000330554 KIF14Q15058 1648 aa23.7■■□□□ 1.39
TPM3P8-201ENST00000330554 PLCH2O75038 1416 aa23.67■■□□□ 1.38
TPM3P8-201ENST00000330554 NEO1Q92859 1461 aa23.66■■□□□ 1.38
TPM3P8-201ENST00000330554 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
TPM3P8-201ENST00000330554 FANCAO15360 1455 aa23.64■■□□□ 1.38
TPM3P8-201ENST00000330554 AKNAQ7Z591 1439 aa23.62■■□□□ 1.37
TPM3P8-201ENST00000330554 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
TPM3P8-201ENST00000330554 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
TPM3P8-201ENST00000330554 RAPGEF3O95398 923 aa23.6■■□□□ 1.37
TPM3P8-201ENST00000330554 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
TPM3P8-201ENST00000330554 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
TPM3P8-201ENST00000330554 ILDR1Q86SU0 546 aaPredicted RBP23.58■■□□□ 1.37
TPM3P8-201ENST00000330554 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
TPM3P8-201ENST00000330554 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.36
TPM3P8-201ENST00000330554 EHBP1L1Q8N3D4 1523 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms