RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 KCNA4P22459 653 aa11.74□□□□□ -0.53
SKA2-201ENST00000330137 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
SKA2-201ENST00000330137 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
SKA2-201ENST00000330137 PDS5BQ9NTI5 1447 aa11.7□□□□□ -0.54
SKA2-201ENST00000330137 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
SKA2-201ENST00000330137 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
SKA2-201ENST00000330137 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
SKA2-201ENST00000330137 ANP32CO43423 234 aa11.65□□□□□ -0.54
SKA2-201ENST00000330137 UBE2Q2Q8WVN8 375 aa11.65□□□□□ -0.54
SKA2-201ENST00000330137 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
SKA2-201ENST00000330137 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
SKA2-201ENST00000330137 PPP4R2Q9NY27 417 aa11.64□□□□□ -0.55
SKA2-201ENST00000330137 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
SKA2-201ENST00000330137 ADRA2BP18089 450 aa11.63□□□□□ -0.55
SKA2-201ENST00000330137 CFTRP13569 1480 aa11.63□□□□□ -0.55
SKA2-201ENST00000330137 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
SKA2-201ENST00000330137 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
SKA2-201ENST00000330137 ITGAEP38570 1179 aa11.61□□□□□ -0.55
SKA2-201ENST00000330137 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
SKA2-201ENST00000330137 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
SKA2-201ENST00000330137 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
SKA2-201ENST00000330137 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
SKA2-201ENST00000330137 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
SKA2-201ENST00000330137 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
SKA2-201ENST00000330137 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
SKA2-201ENST00000330137 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
SKA2-201ENST00000330137 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
SKA2-201ENST00000330137 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
SKA2-201ENST00000330137 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
SKA2-201ENST00000330137 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
SKA2-201ENST00000330137 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
SKA2-201ENST00000330137 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
SKA2-201ENST00000330137 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
SKA2-201ENST00000330137 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
SKA2-201ENST00000330137 WASHC2AQ641Q2 1341 aa11.51□□□□□ -0.57
SKA2-201ENST00000330137 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
SKA2-201ENST00000330137 IPO9Q96P70 1041 aaKnown RBP11.5□□□□□ -0.57
SKA2-201ENST00000330137 SALL2Q9Y467 1007 aaPredicted RBP11.5□□□□□ -0.57
SKA2-201ENST00000330137 WDR62O43379 1518 aa11.5□□□□□ -0.57
SKA2-201ENST00000330137 ANP32AP39687 249 aaKnown RBP11.48□□□□□ -0.57
SKA2-201ENST00000330137 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
SKA2-201ENST00000330137 TOP2BQ02880 1626 aa11.46□□□□□ -0.57
SKA2-201ENST00000330137 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
SKA2-201ENST00000330137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.584e-8■■■■■ 44
SKA2-201ENST00000330137 KANK4Q5T7N3 995 aaPredicted RBP11.45□□□□□ -0.58
SKA2-201ENST00000330137 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
SKA2-201ENST00000330137 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
SKA2-201ENST00000330137 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
SKA2-201ENST00000330137 HNRNPUQ00839 825 aaKnown RBP eCLIP11.44□□□□□ -0.58
SKA2-201ENST00000330137 CCDC136Q96JN2 1154 aa11.43□□□□□ -0.58
SKA2-201ENST00000330137 ZBED9Q6R2W3 1325 aa11.42□□□□□ -0.58
SKA2-201ENST00000330137 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
SKA2-201ENST00000330137 NBR1Q14596 966 aa11.42□□□□□ -0.58
SKA2-201ENST00000330137 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
SKA2-201ENST00000330137 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
SKA2-201ENST00000330137 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.59
SKA2-201ENST00000330137 NCOA2Q15596 1464 aa11.39□□□□□ -0.59
SKA2-201ENST00000330137 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
SKA2-201ENST00000330137 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
SKA2-201ENST00000330137 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
SKA2-201ENST00000330137 ARHGAP35Q9NRY4 1499 aa11.35□□□□□ -0.59
SKA2-201ENST00000330137 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
SKA2-201ENST00000330137 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
SKA2-201ENST00000330137 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
SKA2-201ENST00000330137 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
SKA2-201ENST00000330137 IFT140Q96RY7 1462 aa11.33□□□□□ -0.59
SKA2-201ENST00000330137 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.59
SKA2-201ENST00000330137 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
SKA2-201ENST00000330137 SIN3AQ96ST3 1273 aa11.33□□□□□ -0.6
SKA2-201ENST00000330137 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
SKA2-201ENST00000330137 CNTLNQ9NXG0 1405 aa11.33□□□□□ -0.6
SKA2-201ENST00000330137 CUX1P39880 1505 aa11.32□□□□□ -0.6
SKA2-201ENST00000330137 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
SKA2-201ENST00000330137 FGD5Q6ZNL6 1462 aa11.31□□□□□ -0.6
SKA2-201ENST00000330137 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
SKA2-201ENST00000330137 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
SKA2-201ENST00000330137 UACAQ9BZF9 1416 aa11.3□□□□□ -0.6
SKA2-201ENST00000330137 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
SKA2-201ENST00000330137 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
SKA2-201ENST00000330137 MS4A1P11836 297 aa11.29□□□□□ -0.6
SKA2-201ENST00000330137 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
SKA2-201ENST00000330137 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
SKA2-201ENST00000330137 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
SKA2-201ENST00000330137 GLIPR1L2Q4G1C9 344 aa11.28□□□□□ -0.6
SKA2-201ENST00000330137 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.6
SKA2-201ENST00000330137 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
SKA2-201ENST00000330137 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
SKA2-201ENST00000330137 NEFMP07197 916 aa11.27□□□□□ -0.61
SKA2-201ENST00000330137 DDRGK1Q96HY6 314 aa11.27□□□□□ -0.61
SKA2-201ENST00000330137 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.61
SKA2-201ENST00000330137 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
SKA2-201ENST00000330137 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
SKA2-201ENST00000330137 TARBP1Q13395 1621 aaKnown RBP11.26□□□□□ -0.61
SKA2-201ENST00000330137 GSE1Q14687 1217 aa11.26□□□□□ -0.61
SKA2-201ENST00000330137 FAM43AQ8N2R8 423 aa11.26□□□□□ -0.61
SKA2-201ENST00000330137 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
SKA2-201ENST00000330137 FBLN2P98095 1184 aa11.25□□□□□ -0.61
SKA2-201ENST00000330137 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
SKA2-201ENST00000330137 PRKRIP1Q9H875 184 aaPredicted RBP11.24□□□□□ -0.61
SKA2-201ENST00000330137 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms