RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
GDF3-201ENST00000329913 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
GDF3-201ENST00000329913 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
GDF3-201ENST00000329913 SHROOM2Q13796 1616 aa16.83■□□□□ 0.28
GDF3-201ENST00000329913 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
GDF3-201ENST00000329913 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
GDF3-201ENST00000329913 KIF13AQ9H1H9 1805 aa16.74■□□□□ 0.27
GDF3-201ENST00000329913 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
GDF3-201ENST00000329913 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
GDF3-201ENST00000329913 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
GDF3-201ENST00000329913 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
GDF3-201ENST00000329913 ADCY10Q96PN6 1610 aa16.65■□□□□ 0.26
GDF3-201ENST00000329913 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
GDF3-201ENST00000329913 DIP2BQ9P265 1576 aa16.6■□□□□ 0.25
GDF3-201ENST00000329913 IGF1RP08069 1367 aa16.6■□□□□ 0.25
GDF3-201ENST00000329913 NPM1P06748 294 aaKnown RBP eCLIP16.59■□□□□ 0.25
GDF3-201ENST00000329913 TSPOAP1O95153 1857 aa16.56■□□□□ 0.24
GDF3-201ENST00000329913 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
GDF3-201ENST00000329913 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
GDF3-201ENST00000329913 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
GDF3-201ENST00000329913 CUL7Q14999 1698 aa16.53■□□□□ 0.24
GDF3-201ENST00000329913 KDM6BO15054 1643 aa16.52■□□□□ 0.23
GDF3-201ENST00000329913 MSH5O43196 834 aa16.49■□□□□ 0.23
GDF3-201ENST00000329913 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
GDF3-201ENST00000329913 PTPRGP23470 1445 aa16.48■□□□□ 0.23
GDF3-201ENST00000329913 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
GDF3-201ENST00000329913 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
GDF3-201ENST00000329913 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
GDF3-201ENST00000329913 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
GDF3-201ENST00000329913 ASXL2Q76L83 1435 aa16.41■□□□□ 0.22
GDF3-201ENST00000329913 CARMIL2Q6F5E8 1435 aa16.39■□□□□ 0.21
GDF3-201ENST00000329913 DISP1Q96F81 1524 aa16.39■□□□□ 0.21
GDF3-201ENST00000329913 PPRC1Q5VV67 1664 aaKnown RBP16.38■□□□□ 0.21
GDF3-201ENST00000329913 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
GDF3-201ENST00000329913 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
GDF3-201ENST00000329913 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
GDF3-201ENST00000329913 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
GDF3-201ENST00000329913 UHRF1BP1LA0JNW5 1464 aa16.3■□□□□ 0.2
GDF3-201ENST00000329913 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
GDF3-201ENST00000329913 GLI2P10070 1586 aa16.3■□□□□ 0.2
GDF3-201ENST00000329913 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
GDF3-201ENST00000329913 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
GDF3-201ENST00000329913 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
GDF3-201ENST00000329913 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
GDF3-201ENST00000329913 KDM5BQ9UGL1 1544 aa16.26■□□□□ 0.19
GDF3-201ENST00000329913 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
GDF3-201ENST00000329913 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
GDF3-201ENST00000329913 KCNH8Q96L42 1107 aa16.21■□□□□ 0.19
GDF3-201ENST00000329913 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
GDF3-201ENST00000329913 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
GDF3-201ENST00000329913 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
GDF3-201ENST00000329913 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
GDF3-201ENST00000329913 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
GDF3-201ENST00000329913 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
GDF3-201ENST00000329913 ABCA8O94911 1581 aa16.14■□□□□ 0.17
GDF3-201ENST00000329913 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
GDF3-201ENST00000329913 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
GDF3-201ENST00000329913 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
GDF3-201ENST00000329913 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
GDF3-201ENST00000329913 KIF21BO75037 1637 aa16.08■□□□□ 0.17
GDF3-201ENST00000329913 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
GDF3-201ENST00000329913 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
GDF3-201ENST00000329913 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
GDF3-201ENST00000329913 ATP10BO94823 1461 aa16.02■□□□□ 0.15
GDF3-201ENST00000329913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
GDF3-201ENST00000329913 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
GDF3-201ENST00000329913 RAPGEF3O95398 923 aa15.98■□□□□ 0.15
GDF3-201ENST00000329913 KCNA4P22459 653 aa15.97■□□□□ 0.15
GDF3-201ENST00000329913 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
GDF3-201ENST00000329913 FHOD3Q2V2M9 1422 aa15.95■□□□□ 0.14
GDF3-201ENST00000329913 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
GDF3-201ENST00000329913 SAMD9Q5K651 1589 aa15.95■□□□□ 0.14
GDF3-201ENST00000329913 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
GDF3-201ENST00000329913 ABCA9Q8IUA7 1624 aa15.94■□□□□ 0.14
GDF3-201ENST00000329913 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
GDF3-201ENST00000329913 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
GDF3-201ENST00000329913 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
GDF3-201ENST00000329913 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
GDF3-201ENST00000329913 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
GDF3-201ENST00000329913 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
GDF3-201ENST00000329913 PTPRMP28827 1452 aa15.88■□□□□ 0.13
GDF3-201ENST00000329913 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
GDF3-201ENST00000329913 ADAMTSL3P82987 1691 aa15.86■□□□□ 0.13
GDF3-201ENST00000329913 NEO1Q92859 1461 aa15.84■□□□□ 0.13
GDF3-201ENST00000329913 BCORL1Q5H9F3 1711 aa15.82■□□□□ 0.12
GDF3-201ENST00000329913 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
GDF3-201ENST00000329913 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
GDF3-201ENST00000329913 RIMS1Q86UR5 1692 aaKnown RBP15.81■□□□□ 0.12
GDF3-201ENST00000329913 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
GDF3-201ENST00000329913 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
GDF3-201ENST00000329913 ARHGEF40Q8TER5 1519 aa15.79■□□□□ 0.12
GDF3-201ENST00000329913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
GDF3-201ENST00000329913 YEATS2Q9ULM3 1422 aa15.78■□□□□ 0.12
GDF3-201ENST00000329913 HSPA2P54652 639 aa15.78■□□□□ 0.12
GDF3-201ENST00000329913 MLECQ14165 292 aa15.78■□□□□ 0.12
GDF3-201ENST00000329913 FANCAO15360 1455 aa15.78■□□□□ 0.12
GDF3-201ENST00000329913 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
GDF3-201ENST00000329913 AKNAQ7Z591 1439 aa15.77■□□□□ 0.12
GDF3-201ENST00000329913 RICTORQ6R327 1708 aa15.77■□□□□ 0.12
GDF3-201ENST00000329913 PLEKHD1A6NEE1 506 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms