RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 EEA1Q15075 1411 aa24.96■■□□□ 1.59
CLRN1-203ENST00000328863 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
CLRN1-203ENST00000328863 CTTNBP2Q8WZ74 1663 aa24.92■■□□□ 1.58
CLRN1-203ENST00000328863 IQGAP2Q13576 1575 aa24.92■■□□□ 1.58
CLRN1-203ENST00000328863 PRXQ9BXM0 1461 aa24.89■■□□□ 1.57
CLRN1-203ENST00000328863 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
CLRN1-203ENST00000328863 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
CLRN1-203ENST00000328863 CYB5RLQ6IPT4 315 aa24.86■■□□□ 1.57
CLRN1-203ENST00000328863 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
CLRN1-203ENST00000328863 KIF21BO75037 1637 aa24.75■■□□□ 1.55
CLRN1-203ENST00000328863 CSRNP3Q8WYN3 585 aa24.75■■□□□ 1.55
CLRN1-203ENST00000328863 UGGT2Q9NYU1 1516 aa24.74■■□□□ 1.55
CLRN1-203ENST00000328863 CARMIL2Q6F5E8 1435 aa24.73■■□□□ 1.55
CLRN1-203ENST00000328863 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
CLRN1-203ENST00000328863 DISP1Q96F81 1524 aa24.65■■□□□ 1.54
CLRN1-203ENST00000328863 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
CLRN1-203ENST00000328863 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
CLRN1-203ENST00000328863 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
CLRN1-203ENST00000328863 ADCY10Q96PN6 1610 aa24.58■■□□□ 1.53
CLRN1-203ENST00000328863 PTPRGP23470 1445 aa24.55■■□□□ 1.52
CLRN1-203ENST00000328863 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
CLRN1-203ENST00000328863 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
CLRN1-203ENST00000328863 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
CLRN1-203ENST00000328863 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.5
CLRN1-203ENST00000328863 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.5
CLRN1-203ENST00000328863 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
CLRN1-203ENST00000328863 UACAQ9BZF9 1416 aa24.43■■□□□ 1.5
CLRN1-203ENST00000328863 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.49
CLRN1-203ENST00000328863 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
CLRN1-203ENST00000328863 ABCA8O94911 1581 aa24.37■■□□□ 1.49
CLRN1-203ENST00000328863 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
CLRN1-203ENST00000328863 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
CLRN1-203ENST00000328863 ZCCHC11Q5TAX3 1644 aaKnown RBP24.34■■□□□ 1.49
CLRN1-203ENST00000328863 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
CLRN1-203ENST00000328863 KDM5BQ9UGL1 1544 aa24.31■■□□□ 1.48
CLRN1-203ENST00000328863 DIP2BQ9P265 1576 aa24.31■■□□□ 1.48
CLRN1-203ENST00000328863 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
CLRN1-203ENST00000328863 RAPGEF6Q8TEU7 1601 aa24.28■■□□□ 1.48
CLRN1-203ENST00000328863 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
CLRN1-203ENST00000328863 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
CLRN1-203ENST00000328863 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
CLRN1-203ENST00000328863 P3H3Q8IVL6 736 aa24.24■■□□□ 1.47
CLRN1-203ENST00000328863 ASXL2Q76L83 1435 aa24.22■■□□□ 1.47
CLRN1-203ENST00000328863 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
CLRN1-203ENST00000328863 WDR7Q9Y4E6 1490 aa24.16■■□□□ 1.46
CLRN1-203ENST00000328863 GLI2P10070 1586 aa24.15■■□□□ 1.46
CLRN1-203ENST00000328863 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
CLRN1-203ENST00000328863 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
CLRN1-203ENST00000328863 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
CLRN1-203ENST00000328863 FAM69CQ0P6D2 419 aa24.1■■□□□ 1.45
CLRN1-203ENST00000328863 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
CLRN1-203ENST00000328863 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
CLRN1-203ENST00000328863 MAP3K4Q9Y6R4 1608 aa24.07■■□□□ 1.44
CLRN1-203ENST00000328863 ATP10BO94823 1461 aa24.07■■□□□ 1.44
CLRN1-203ENST00000328863 CLIP1P30622 1438 aa24.06■■□□□ 1.44
CLRN1-203ENST00000328863 CFAP43Q8NDM7 1665 aa24.04■■□□□ 1.44
CLRN1-203ENST00000328863 PCF11O94913 1555 aaKnown RBP24.02■■□□□ 1.44
CLRN1-203ENST00000328863 PPRC1Q5VV67 1664 aaKnown RBP24.01■■□□□ 1.43
CLRN1-203ENST00000328863 ARID3CA6NKF2 412 aa24■■□□□ 1.43
CLRN1-203ENST00000328863 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
CLRN1-203ENST00000328863 CEP162Q5TB80 1403 aa23.96■■□□□ 1.43
CLRN1-203ENST00000328863 TEX14Q8IWB6 1497 aa23.95■■□□□ 1.42
CLRN1-203ENST00000328863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.95■■□□□ 1.42
CLRN1-203ENST00000328863 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.42
CLRN1-203ENST00000328863 KDM6BO15054 1643 aa23.94■■□□□ 1.42
CLRN1-203ENST00000328863 ABCA9Q8IUA7 1624 aa23.94■■□□□ 1.42
CLRN1-203ENST00000328863 FYCO1Q9BQS8 1478 aa23.94■■□□□ 1.42
CLRN1-203ENST00000328863 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
CLRN1-203ENST00000328863 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
CLRN1-203ENST00000328863 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
CLRN1-203ENST00000328863 MAGI3Q5TCQ9 1506 aa23.87■■□□□ 1.41
CLRN1-203ENST00000328863 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
CLRN1-203ENST00000328863 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
CLRN1-203ENST00000328863 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
CLRN1-203ENST00000328863 KIF14Q15058 1648 aa23.84■■□□□ 1.41
CLRN1-203ENST00000328863 PLEKHD1A6NEE1 506 aa23.83■■□□□ 1.41
CLRN1-203ENST00000328863 TTC37Q6PGP7 1564 aa23.81■■□□□ 1.4
CLRN1-203ENST00000328863 CDK11AQ9UQ88 783 aaPredicted RBP23.79■■□□□ 1.4
CLRN1-203ENST00000328863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
CLRN1-203ENST00000328863 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
CLRN1-203ENST00000328863 TROQ12816 1431 aaPredicted RBP23.76■■□□□ 1.39
CLRN1-203ENST00000328863 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
CLRN1-203ENST00000328863 MYO5CQ9NQX4 1742 aa23.76■■□□□ 1.39
CLRN1-203ENST00000328863 NEO1Q92859 1461 aa23.71■■□□□ 1.39
CLRN1-203ENST00000328863 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
CLRN1-203ENST00000328863 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
CLRN1-203ENST00000328863 ARAP3Q8WWN8 1544 aa23.67■■□□□ 1.38
CLRN1-203ENST00000328863 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
CLRN1-203ENST00000328863 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
CLRN1-203ENST00000328863 FANCAO15360 1455 aa23.64■■□□□ 1.38
CLRN1-203ENST00000328863 PREX2Q70Z35 1606 aa23.63■■□□□ 1.37
CLRN1-203ENST00000328863 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
CLRN1-203ENST00000328863 TIAM1Q13009 1591 aa23.6■■□□□ 1.37
CLRN1-203ENST00000328863 PLCH2O75038 1416 aa23.59■■□□□ 1.37
CLRN1-203ENST00000328863 ARHGAP5Q13017 1502 aa23.59■■□□□ 1.37
CLRN1-203ENST00000328863 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
CLRN1-203ENST00000328863 CDC42BPAQ5VT25 1732 aa23.58■■□□□ 1.37
CLRN1-203ENST00000328863 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
CLRN1-203ENST00000328863 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
CLRN1-203ENST00000328863 RICTORQ6R327 1708 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms