RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 KIAA0586Q9BVV6 1533 aa36.62■■■■□ 3.45
TNRC18-201ENST00000328270 JPH4Q96JJ6 628 aa36.59■■■■□ 3.45
TNRC18-201ENST00000328270 PRG4Q92954 1404 aaPredicted RBP36.58■■■■□ 3.45
TNRC18-201ENST00000328270 RAPGEF2Q9Y4G8 1499 aa36.57■■■■□ 3.45
TNRC18-201ENST00000328270 IQGAP2Q13576 1575 aa36.44■■■■□ 3.42
TNRC18-201ENST00000328270 PRXQ9BXM0 1461 aa36.41■■■■□ 3.42
TNRC18-201ENST00000328270 CHIC1Q5VXU3 224 aa36.38■■■■□ 3.41
TNRC18-201ENST00000328270 CTTNBP2Q8WZ74 1663 aa36.35■■■■□ 3.41
TNRC18-201ENST00000328270 EEA1Q15075 1411 aa36.34■■■■□ 3.41
TNRC18-201ENST00000328270 CSRNP3Q8WYN3 585 aa36.29■■■■□ 3.4
TNRC18-201ENST00000328270 CARMIL2Q6F5E8 1435 aa36.23■■■■□ 3.39
TNRC18-201ENST00000328270 UGGT2Q9NYU1 1516 aa36.22■■■■□ 3.39
TNRC18-201ENST00000328270 DISP1Q96F81 1524 aa36.17■■■■□ 3.38
TNRC18-201ENST00000328270 FAM9AQ8IZU1 332 aaPredicted RBP36.16■■■■□ 3.38
TNRC18-201ENST00000328270 TRHP20396 242 aaPredicted RBP36.12■■■■□ 3.37
TNRC18-201ENST00000328270 TNIKQ9UKE5 1360 aa36.12■■■■□ 3.37
TNRC18-201ENST00000328270 KIAA0556O60303 1618 aa36.11■■■■□ 3.37
TNRC18-201ENST00000328270 PTPRGP23470 1445 aa36.1■■■■□ 3.37
TNRC18-201ENST00000328270 ADCY10Q96PN6 1610 aa36.1■■■■□ 3.37
TNRC18-201ENST00000328270 KIF21BO75037 1637 aa36.05■■■■□ 3.36
TNRC18-201ENST00000328270 TTBK1Q5TCY1 1321 aaPredicted RBP36.04■■■■□ 3.36
TNRC18-201ENST00000328270 GOLGA3Q08378 1498 aa35.99■■■■□ 3.35
TNRC18-201ENST00000328270 NPM1P06748 294 aaKnown RBP eCLIP35.91■■■■□ 3.34
TNRC18-201ENST00000328270 MAPKBP1O60336 1514 aa35.88■■■■□ 3.33
TNRC18-201ENST00000328270 UACAQ9BZF9 1416 aa35.86■■■■□ 3.33
TNRC18-201ENST00000328270 UHRF1BP1LA0JNW5 1464 aa35.86■■■■□ 3.33
TNRC18-201ENST00000328270 ABCC2Q92887 1545 aa35.84■■■■□ 3.33
TNRC18-201ENST00000328270 KIF13AQ9H1H9 1805 aa35.83■■■■□ 3.33
TNRC18-201ENST00000328270 SAMD9Q5K651 1589 aa35.82■■■■□ 3.32
TNRC18-201ENST00000328270 PLB1Q6P1J6 1458 aa35.73■■■■□ 3.31
TNRC18-201ENST00000328270 EHMT2Q96KQ7 1210 aa35.72■■■■□ 3.31
TNRC18-201ENST00000328270 P3H3Q8IVL6 736 aa35.71■■■■□ 3.31
TNRC18-201ENST00000328270 ABCA8O94911 1581 aa35.71■■■■□ 3.31
TNRC18-201ENST00000328270 ABCC10Q5T3U5 1492 aa35.7■■■■□ 3.31
TNRC18-201ENST00000328270 DIP2BQ9P265 1576 aa35.7■■■■□ 3.31
TNRC18-201ENST00000328270 KDM5BQ9UGL1 1544 aa35.69■■■■□ 3.3
TNRC18-201ENST00000328270 ZCCHC11Q5TAX3 1644 aaKnown RBP35.68■■■■□ 3.3
TNRC18-201ENST00000328270 RANGAP1P46060 587 aaPredicted RBP35.67■■■■□ 3.3
TNRC18-201ENST00000328270 UBTFP17480 764 aaKnown RBP35.65■■■■□ 3.3
TNRC18-201ENST00000328270 EFCAB5A4FU69 1503 aa35.62■■■■□ 3.29
TNRC18-201ENST00000328270 ASXL2Q76L83 1435 aa35.61■■■■□ 3.29
TNRC18-201ENST00000328270 FAM69CQ0P6D2 419 aa35.6■■■■□ 3.29
TNRC18-201ENST00000328270 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
TNRC18-201ENST00000328270 RAPGEF6Q8TEU7 1601 aa35.51■■■■□ 3.28
TNRC18-201ENST00000328270 TSPOAP1O95153 1857 aa35.48■■■■□ 3.27
TNRC18-201ENST00000328270 GLI2P10070 1586 aa35.44■■■■□ 3.26
TNRC18-201ENST00000328270 EPRSP07814 1512 aaKnown RBP35.42■■■■□ 3.26
TNRC18-201ENST00000328270 WDR7Q9Y4E6 1490 aa35.41■■■■□ 3.26
TNRC18-201ENST00000328270 ARHGAP35Q9NRY4 1499 aa35.39■■■■□ 3.26
TNRC18-201ENST00000328270 ATP10BO94823 1461 aa35.37■■■■□ 3.25
TNRC18-201ENST00000328270 ARID3CA6NKF2 412 aa35.36■■■■□ 3.25
TNRC18-201ENST00000328270 NUP153P49790 1475 aaKnown RBP35.34■■■■□ 3.25
TNRC18-201ENST00000328270 MAP3K4Q9Y6R4 1608 aa35.31■■■■□ 3.24
TNRC18-201ENST00000328270 PPRC1Q5VV67 1664 aaKnown RBP35.3■■■■□ 3.24
TNRC18-201ENST00000328270 FMN1Q68DA7 1419 aa35.24■■■■□ 3.23
TNRC18-201ENST00000328270 KCNH8Q96L42 1107 aa35.2■■■■□ 3.23
TNRC18-201ENST00000328270 CFAP43Q8NDM7 1665 aa35.2■■■■□ 3.23
TNRC18-201ENST00000328270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.18■■■■□ 3.22
TNRC18-201ENST00000328270 HNRNPUL2Q1KMD3 747 aaKnown RBP35.18■■■■□ 3.22
TNRC18-201ENST00000328270 KDM6BO15054 1643 aa35.17■■■■□ 3.22
TNRC18-201ENST00000328270 HECW1Q76N89 1606 aa35.15■■■■□ 3.22
TNRC18-201ENST00000328270 CLIP1P30622 1438 aa35.12■■■■□ 3.21
TNRC18-201ENST00000328270 TEX14Q8IWB6 1497 aa35.1■■■■□ 3.21
TNRC18-201ENST00000328270 CDK13Q14004 1512 aaKnown RBP35.1■■■■□ 3.21
TNRC18-201ENST00000328270 CD109Q6YHK3 1445 aa35.08■■■■□ 3.21
TNRC18-201ENST00000328270 ABCA9Q8IUA7 1624 aa35.07■■■■□ 3.21
TNRC18-201ENST00000328270 ATP1B4Q9UN42 357 aaPredicted RBP35.04■■■■□ 3.2
TNRC18-201ENST00000328270 MAGI3Q5TCQ9 1506 aa35.04■■■■□ 3.2
TNRC18-201ENST00000328270 PCF11O94913 1555 aaKnown RBP35.03■■■■□ 3.2
TNRC18-201ENST00000328270 LRRIQ1Q96JM4 1722 aa35.02■■■■□ 3.2
TNRC18-201ENST00000328270 PLEKHD1A6NEE1 506 aa35.01■■■■□ 3.2
TNRC18-201ENST00000328270 CASKIN1Q8WXD9 1431 aa34.96■■■■□ 3.19
TNRC18-201ENST00000328270 CEP162Q5TB80 1403 aa34.94■■■■□ 3.18
TNRC18-201ENST00000328270 COL17A1Q9UMD9 1497 aaPredicted RBP34.9■■■■□ 3.18
TNRC18-201ENST00000328270 LOC105371045A0A1W2PR82 267 aa34.9■■■■□ 3.18
TNRC18-201ENST00000328270 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
TNRC18-201ENST00000328270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.87■■■■□ 3.17
TNRC18-201ENST00000328270 TTC37Q6PGP7 1564 aa34.86■■■■□ 3.17
TNRC18-201ENST00000328270 CCDC18Q5T9S5 1454 aa34.85■■■■□ 3.17
TNRC18-201ENST00000328270 CDK11AQ9UQ88 783 aaPredicted RBP34.83■■■■□ 3.17
TNRC18-201ENST00000328270 TROQ12816 1431 aaPredicted RBP34.78■■■■□ 3.16
TNRC18-201ENST00000328270 KIF14Q15058 1648 aa34.77■■■■□ 3.16
TNRC18-201ENST00000328270 NEO1Q92859 1461 aa34.76■■■■□ 3.15
TNRC18-201ENST00000328270 ARAP3Q8WWN8 1544 aa34.75■■■■□ 3.15
TNRC18-201ENST00000328270 PHLDB1Q86UU1 1377 aa34.73■■■■□ 3.15
TNRC18-201ENST00000328270 CFAP74Q9C0B2 1584 aa34.7■■■■□ 3.15
TNRC18-201ENST00000328270 MYO5CQ9NQX4 1742 aa34.7■■■■□ 3.15
TNRC18-201ENST00000328270 FANCAO15360 1455 aa34.66■■■■□ 3.14
TNRC18-201ENST00000328270 PLCH2O75038 1416 aa34.62■■■■□ 3.13
TNRC18-201ENST00000328270 AKNAQ7Z591 1439 aa34.59■■■■□ 3.13
TNRC18-201ENST00000328270 FRMPD1Q5SYB0 1578 aa34.57■■■■□ 3.12
TNRC18-201ENST00000328270 RICTORQ6R327 1708 aa34.54■■■■□ 3.12
TNRC18-201ENST00000328270 RAPGEF3O95398 923 aa34.52■■■■□ 3.12
TNRC18-201ENST00000328270 VPS8Q8N3P4 1428 aa34.52■■■■□ 3.12
TNRC18-201ENST00000328270 CDC42BPBQ9Y5S2 1711 aa34.52■■■■□ 3.12
TNRC18-201ENST00000328270 PREX2Q70Z35 1606 aa34.51■■■■□ 3.11
TNRC18-201ENST00000328270 DENND4BO75064 1496 aaPredicted RBP34.51■■■■□ 3.11
TNRC18-201ENST00000328270 ARHGAP5Q13017 1502 aa34.5■■■■□ 3.11
TNRC18-201ENST00000328270 CDC42BPAQ5VT25 1732 aa34.49■■■■□ 3.11
TNRC18-201ENST00000328270 ADGRL1O94910 1474 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms