RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CUL7Q14999 1698 aa30.76■■■□□ 2.51
PTPMT1-201ENST00000326656 RUSC2Q8N2Y8 1516 aa30.75■■■□□ 2.51
PTPMT1-201ENST00000326656 KIAA0586Q9BVV6 1533 aa30.7■■■□□ 2.51
PTPMT1-201ENST00000326656 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
PTPMT1-201ENST00000326656 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
PTPMT1-201ENST00000326656 NPM1P06748 294 aaKnown RBP eCLIP30.53■■■□□ 2.48
PTPMT1-201ENST00000326656 KIF13AQ9H1H9 1805 aa30.43■■■□□ 2.46
PTPMT1-201ENST00000326656 MAPKBP1O60336 1514 aa30.42■■■□□ 2.46
PTPMT1-201ENST00000326656 CARMIL2Q6F5E8 1435 aa30.41■■■□□ 2.46
PTPMT1-201ENST00000326656 ADCY10Q96PN6 1610 aa30.41■■■□□ 2.46
PTPMT1-201ENST00000326656 PTPRGP23470 1445 aa30.39■■■□□ 2.45
PTPMT1-201ENST00000326656 IQGAP2Q13576 1575 aa30.37■■■□□ 2.45
PTPMT1-201ENST00000326656 ABCC10Q5T3U5 1492 aa30.37■■■□□ 2.45
PTPMT1-201ENST00000326656 RAPGEF2Q9Y4G8 1499 aa30.36■■■□□ 2.45
PTPMT1-201ENST00000326656 TNIKQ9UKE5 1360 aa30.34■■■□□ 2.45
PTPMT1-201ENST00000326656 FAM69CQ0P6D2 419 aa30.32■■■□□ 2.44
PTPMT1-201ENST00000326656 DIP2BQ9P265 1576 aa30.24■■■□□ 2.43
PTPMT1-201ENST00000326656 DISP1Q96F81 1524 aa30.22■■■□□ 2.43
PTPMT1-201ENST00000326656 UGGT2Q9NYU1 1516 aa30.22■■■□□ 2.43
PTPMT1-201ENST00000326656 UHRF1BP1LA0JNW5 1464 aa30.19■■■□□ 2.42
PTPMT1-201ENST00000326656 ABCC2Q92887 1545 aa30.19■■■□□ 2.42
PTPMT1-201ENST00000326656 TTBK1Q5TCY1 1321 aaPredicted RBP30.17■■■□□ 2.42
PTPMT1-201ENST00000326656 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
PTPMT1-201ENST00000326656 PLB1Q6P1J6 1458 aa30.1■■■□□ 2.41
PTPMT1-201ENST00000326656 KIAA0556O60303 1618 aa30.07■■■□□ 2.4
PTPMT1-201ENST00000326656 PRXQ9BXM0 1461 aa30.07■■■□□ 2.4
PTPMT1-201ENST00000326656 CTTNBP2Q8WZ74 1663 aa30.06■■■□□ 2.4
PTPMT1-201ENST00000326656 ASXL2Q76L83 1435 aa30.05■■■□□ 2.4
PTPMT1-201ENST00000326656 KDM5BQ9UGL1 1544 aa30.03■■■□□ 2.4
PTPMT1-201ENST00000326656 GOLGA3Q08378 1498 aa30.02■■■□□ 2.4
PTPMT1-201ENST00000326656 GLI2P10070 1586 aa30.01■■■□□ 2.39
PTPMT1-201ENST00000326656 TSPOAP1O95153 1857 aa29.99■■■□□ 2.39
PTPMT1-201ENST00000326656 KDM6BO15054 1643 aa29.96■■■□□ 2.39
PTPMT1-201ENST00000326656 CSRNP3Q8WYN3 585 aa29.91■■■□□ 2.38
PTPMT1-201ENST00000326656 ZCCHC11Q5TAX3 1644 aaKnown RBP29.9■■■□□ 2.38
PTPMT1-201ENST00000326656 EPRSP07814 1512 aaKnown RBP29.88■■■□□ 2.37
PTPMT1-201ENST00000326656 FAM9AQ8IZU1 332 aaPredicted RBP29.86■■■□□ 2.37
PTPMT1-201ENST00000326656 EEA1Q15075 1411 aa29.84■■■□□ 2.37
PTPMT1-201ENST00000326656 PPRC1Q5VV67 1664 aaKnown RBP29.82■■■□□ 2.36
PTPMT1-201ENST00000326656 ABCA8O94911 1581 aa29.82■■■□□ 2.36
PTPMT1-201ENST00000326656 MAP3K4Q9Y6R4 1608 aa29.8■■■□□ 2.36
PTPMT1-201ENST00000326656 WDR7Q9Y4E6 1490 aa29.79■■■□□ 2.36
PTPMT1-201ENST00000326656 TEX14Q8IWB6 1497 aa29.77■■■□□ 2.36
PTPMT1-201ENST00000326656 KDM4FA0A1W2PPD8 638 aa29.73■■■□□ 2.35
PTPMT1-201ENST00000326656 SAMD9Q5K651 1589 aa29.65■■■□□ 2.34
PTPMT1-201ENST00000326656 P3H3Q8IVL6 736 aa29.64■■■□□ 2.34
PTPMT1-201ENST00000326656 CFAP43Q8NDM7 1665 aa29.63■■■□□ 2.33
PTPMT1-201ENST00000326656 COL17A1Q9UMD9 1497 aaPredicted RBP29.62■■■□□ 2.33
PTPMT1-201ENST00000326656 MAGI3Q5TCQ9 1506 aa29.62■■■□□ 2.33
PTPMT1-201ENST00000326656 KCNH8Q96L42 1107 aa29.62■■■□□ 2.33
PTPMT1-201ENST00000326656 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
PTPMT1-201ENST00000326656 ATP10BO94823 1461 aa29.59■■■□□ 2.33
PTPMT1-201ENST00000326656 KIF21BO75037 1637 aa29.51■■■□□ 2.31
PTPMT1-201ENST00000326656 RAPGEF6Q8TEU7 1601 aa29.51■■■□□ 2.31
PTPMT1-201ENST00000326656 ARID3CA6NKF2 412 aa29.46■■■□□ 2.31
PTPMT1-201ENST00000326656 PHLDB1Q86UU1 1377 aa29.43■■■□□ 2.3
PTPMT1-201ENST00000326656 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
PTPMT1-201ENST00000326656 ABCA9Q8IUA7 1624 aa29.42■■■□□ 2.3
PTPMT1-201ENST00000326656 RANGAP1P46060 587 aaPredicted RBP29.4■■■□□ 2.3
PTPMT1-201ENST00000326656 NUP153P49790 1475 aaKnown RBP29.4■■■□□ 2.3
PTPMT1-201ENST00000326656 ARAP3Q8WWN8 1544 aa29.4■■■□□ 2.3
PTPMT1-201ENST00000326656 FHOD3Q2V2M9 1422 aa29.39■■■□□ 2.3
PTPMT1-201ENST00000326656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.3
PTPMT1-201ENST00000326656 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.3
PTPMT1-201ENST00000326656 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
PTPMT1-201ENST00000326656 ADGRL1O94910 1474 aa29.39■■■□□ 2.3
PTPMT1-201ENST00000326656 ILDR1Q86SU0 546 aaPredicted RBP29.35■■■□□ 2.29
PTPMT1-201ENST00000326656 PLEKHD1A6NEE1 506 aa29.33■■■□□ 2.29
PTPMT1-201ENST00000326656 NEO1Q92859 1461 aa29.29■■■□□ 2.28
PTPMT1-201ENST00000326656 UBTFP17480 764 aaKnown RBP29.29■■■□□ 2.28
PTPMT1-201ENST00000326656 FMN1Q68DA7 1419 aa29.19■■■□□ 2.26
PTPMT1-201ENST00000326656 RAPGEF3O95398 923 aa29.14■■■□□ 2.26
PTPMT1-201ENST00000326656 ARHGAP35Q9NRY4 1499 aa29.12■■■□□ 2.25
PTPMT1-201ENST00000326656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
PTPMT1-201ENST00000326656 EHMT2Q96KQ7 1210 aa29.11■■■□□ 2.25
PTPMT1-201ENST00000326656 CFAP74Q9C0B2 1584 aa29.09■■■□□ 2.25
PTPMT1-201ENST00000326656 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
PTPMT1-201ENST00000326656 HECW2Q9P2P5 1572 aa29.08■■■□□ 2.25
PTPMT1-201ENST00000326656 FANCAO15360 1455 aa29.07■■■□□ 2.24
PTPMT1-201ENST00000326656 AKNAQ7Z591 1439 aa29.07■■■□□ 2.24
PTPMT1-201ENST00000326656 HECW1Q76N89 1606 aa29.06■■■□□ 2.24
PTPMT1-201ENST00000326656 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
PTPMT1-201ENST00000326656 DENND4BO75064 1496 aaPredicted RBP29.05■■■□□ 2.24
PTPMT1-201ENST00000326656 FRMPD1Q5SYB0 1578 aa29.04■■■□□ 2.24
PTPMT1-201ENST00000326656 TTC37Q6PGP7 1564 aa29.02■■■□□ 2.24
PTPMT1-201ENST00000326656 ATP1B4Q9UN42 357 aaPredicted RBP29.02■■■□□ 2.24
PTPMT1-201ENST00000326656 PLCH2O75038 1416 aa28.99■■■□□ 2.23
PTPMT1-201ENST00000326656 RICTORQ6R327 1708 aa28.99■■■□□ 2.23
PTPMT1-201ENST00000326656 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.22
PTPMT1-201ENST00000326656 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
PTPMT1-201ENST00000326656 ZMYM4Q5VZL5 1548 aa28.91■■■□□ 2.22
PTPMT1-201ENST00000326656 ARHGEF40Q8TER5 1519 aa28.91■■■□□ 2.22
PTPMT1-201ENST00000326656 EFCAB2Q5VUJ9 269 aa28.91■■■□□ 2.22
PTPMT1-201ENST00000326656 TROQ12816 1431 aaPredicted RBP28.91■■■□□ 2.22
PTPMT1-201ENST00000326656 ARID4BQ4LE39 1312 aaPredicted RBP28.91■■■□□ 2.22
PTPMT1-201ENST00000326656 BCORL1Q5H9F3 1711 aa28.89■■■□□ 2.21
PTPMT1-201ENST00000326656 CLIP1P30622 1438 aa28.88■■■□□ 2.21
PTPMT1-201ENST00000326656 MYO5CQ9NQX4 1742 aa28.88■■■□□ 2.21
PTPMT1-201ENST00000326656 PTPRMP28827 1452 aa28.87■■■□□ 2.21
PTPMT1-201ENST00000326656 SCAPERQ9BY12 1400 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms