RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 KDM2AQ9Y2K7 1162 aa23.59■■□□□ 1.37
LMNB2-201ENST00000325327 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
LMNB2-201ENST00000325327 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
LMNB2-201ENST00000325327 TONSLQ96HA7 1378 aa23.49■■□□□ 1.35
LMNB2-201ENST00000325327 NESP48681 1621 aa23.47■■□□□ 1.35
LMNB2-201ENST00000325327 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
LMNB2-201ENST00000325327 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
LMNB2-201ENST00000325327 MLECQ14165 292 aa23.44■■□□□ 1.34
LMNB2-201ENST00000325327 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
LMNB2-201ENST00000325327 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
LMNB2-201ENST00000325327 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
LMNB2-201ENST00000325327 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
LMNB2-201ENST00000325327 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
LMNB2-201ENST00000325327 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
LMNB2-201ENST00000325327 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
LMNB2-201ENST00000325327 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
LMNB2-201ENST00000325327 ZNF316A6NFI3 1004 aaPredicted RBP23.34■■□□□ 1.33
LMNB2-201ENST00000325327 ANP32CO43423 234 aa23.33■■□□□ 1.33
LMNB2-201ENST00000325327 SLC24A1O60721 1099 aa23.33■■□□□ 1.32
LMNB2-201ENST00000325327 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
LMNB2-201ENST00000325327 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
LMNB2-201ENST00000325327 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.323e-7■■■■■ 29.1
LMNB2-201ENST00000325327 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
LMNB2-201ENST00000325327 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
LMNB2-201ENST00000325327 RAPGEF2Q9Y4G8 1499 aa23.28■■□□□ 1.32
LMNB2-201ENST00000325327 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
LMNB2-201ENST00000325327 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
LMNB2-201ENST00000325327 GGT6Q6P531 493 aa23.24■■□□□ 1.31
LMNB2-201ENST00000325327 DDX10Q13206 875 aaKnown RBP23.21■■□□□ 1.31
LMNB2-201ENST00000325327 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
LMNB2-201ENST00000325327 IGF1RP08069 1367 aa23.18■■□□□ 1.3
LMNB2-201ENST00000325327 VPS8Q8N3P4 1428 aa23.15■■□□□ 1.3
LMNB2-201ENST00000325327 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.3
LMNB2-201ENST00000325327 C14orf37Q86TY3 774 aa23.14■■□□□ 1.3
LMNB2-201ENST00000325327 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
LMNB2-201ENST00000325327 CFTRP13569 1480 aa23.12■■□□□ 1.29
LMNB2-201ENST00000325327 EFCAB2Q5VUJ9 269 aa23.12■■□□□ 1.29
LMNB2-201ENST00000325327 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.291e-6■□□□□ 9.5
LMNB2-201ENST00000325327 FMN1Q68DA7 1419 aa23.09■■□□□ 1.29
LMNB2-201ENST00000325327 PTPRGP23470 1445 aa23.09■■□□□ 1.29
LMNB2-201ENST00000325327 FOXD1Q16676 465 aa23.05■■□□□ 1.28
LMNB2-201ENST00000325327 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
LMNB2-201ENST00000325327 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
LMNB2-201ENST00000325327 NEFMP07197 916 aa23.02■■□□□ 1.28
LMNB2-201ENST00000325327 TMC1Q8TDI8 760 aa22.99■■□□□ 1.27
LMNB2-201ENST00000325327 ERICH6Q7L0X2 663 aa22.97■■□□□ 1.27
LMNB2-201ENST00000325327 KIF3BO15066 747 aa22.96■■□□□ 1.27
LMNB2-201ENST00000325327 ZBTB7CA1YPR0 619 aa22.96■■□□□ 1.27
LMNB2-201ENST00000325327 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
LMNB2-201ENST00000325327 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
LMNB2-201ENST00000325327 EIF4G2P78344 907 aaKnown RBP eCLIP22.93■■□□□ 1.261e-6■■■■■ 36.8
LMNB2-201ENST00000325327 FAM9BQ8IZU0 186 aa22.93■■□□□ 1.26
LMNB2-201ENST00000325327 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
LMNB2-201ENST00000325327 PKD2Q13563 968 aa22.9■■□□□ 1.26
LMNB2-201ENST00000325327 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
LMNB2-201ENST00000325327 FAM69CQ0P6D2 419 aa22.89■■□□□ 1.25
LMNB2-201ENST00000325327 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
LMNB2-201ENST00000325327 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
LMNB2-201ENST00000325327 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
LMNB2-201ENST00000325327 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
LMNB2-201ENST00000325327 SAFB2Q14151 953 aaKnown RBP eCLIP22.86■■□□□ 1.25
LMNB2-201ENST00000325327 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
LMNB2-201ENST00000325327 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
LMNB2-201ENST00000325327 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
LMNB2-201ENST00000325327 A0A0G2JS52 829 aa22.84■■□□□ 1.25
LMNB2-201ENST00000325327 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
LMNB2-201ENST00000325327 POGKQ9P215 609 aa22.82■■□□□ 1.24
LMNB2-201ENST00000325327 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
LMNB2-201ENST00000325327 KANK1Q14678 1352 aa22.82■■□□□ 1.24
LMNB2-201ENST00000325327 NUP155O75694 1391 aa22.81■■□□□ 1.24
LMNB2-201ENST00000325327 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
LMNB2-201ENST00000325327 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
LMNB2-201ENST00000325327 CUX1P39880 1505 aa22.77■■□□□ 1.24
LMNB2-201ENST00000325327 STK26Q9P289 416 aa22.76■■□□□ 1.23
LMNB2-201ENST00000325327 HNRNPUQ00839 825 aaKnown RBP eCLIP22.76■■□□□ 1.23
LMNB2-201ENST00000325327 ZNF644Q9H582 1327 aaPredicted RBP22.75■■□□□ 1.23
LMNB2-201ENST00000325327 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
LMNB2-201ENST00000325327 WASHC2CQ9Y4E1 1318 aa22.74■■□□□ 1.23
LMNB2-201ENST00000325327 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
LMNB2-201ENST00000325327 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
LMNB2-201ENST00000325327 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
LMNB2-201ENST00000325327 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
LMNB2-201ENST00000325327 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
LMNB2-201ENST00000325327 MPHOSPH9Q99550 1183 aa22.72■■□□□ 1.23
LMNB2-201ENST00000325327 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
LMNB2-201ENST00000325327 ANKRD30AQ9BXX3 1397 aa22.72■■□□□ 1.23
LMNB2-201ENST00000325327 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
LMNB2-201ENST00000325327 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
LMNB2-201ENST00000325327 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
LMNB2-201ENST00000325327 TNNT2P45379 298 aaPredicted RBP22.67■■□□□ 1.22
LMNB2-201ENST00000325327 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
LMNB2-201ENST00000325327 SOX12O15370 315 aa22.64■■□□□ 1.22
LMNB2-201ENST00000325327 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
LMNB2-201ENST00000325327 MIER1Q8N108 512 aa22.62■■□□□ 1.21
LMNB2-201ENST00000325327 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
LMNB2-201ENST00000325327 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
LMNB2-201ENST00000325327 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
LMNB2-201ENST00000325327 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
LMNB2-201ENST00000325327 KNSTRNQ9Y448 316 aa22.58■■□□□ 1.2
LMNB2-201ENST00000325327 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms