RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ARHGAP35Q9NRY4 1499 aa29.61■■■□□ 2.33
CHMP6-201ENST00000325167 TDRD9Q8NDG6 1382 aaKnown RBP29.57■■■□□ 2.32
CHMP6-201ENST00000325167 CHD1O14646 1710 aa29.51■■■□□ 2.31
CHMP6-201ENST00000325167 EFCAB5A4FU69 1503 aa29.47■■■□□ 2.31
CHMP6-201ENST00000325167 FBLN2P98095 1184 aa29.47■■■□□ 2.31
CHMP6-201ENST00000325167 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
CHMP6-201ENST00000325167 TTBK1Q5TCY1 1321 aaPredicted RBP29.43■■■□□ 2.3
CHMP6-201ENST00000325167 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
CHMP6-201ENST00000325167 SNAPC4Q5SXM2 1469 aa29.41■■■□□ 2.3
CHMP6-201ENST00000325167 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
CHMP6-201ENST00000325167 RIMBP3CA6NJZ7 1639 aa29.39■■■□□ 2.3
CHMP6-201ENST00000325167 RIMBP3BA6NNM3 1639 aa29.39■■■□□ 2.3
CHMP6-201ENST00000325167 RIMBP3Q9UFD9 1639 aa29.39■■■□□ 2.3
CHMP6-201ENST00000325167 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
CHMP6-201ENST00000325167 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
CHMP6-201ENST00000325167 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
CHMP6-201ENST00000325167 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
CHMP6-201ENST00000325167 ADAMTS12P58397 1594 aa29.26■■■□□ 2.28
CHMP6-201ENST00000325167 CHMP7Q8WUX9 453 aaPredicted RBP29.25■■■□□ 2.27
CHMP6-201ENST00000325167 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
CHMP6-201ENST00000325167 FMN1Q68DA7 1419 aa29.21■■■□□ 2.27
CHMP6-201ENST00000325167 SYNJ2O15056 1496 aa29.2■■■□□ 2.27
CHMP6-201ENST00000325167 FYCO1Q9BQS8 1478 aa29.2■■■□□ 2.27
CHMP6-201ENST00000325167 SAMD9Q5K651 1589 aa29.19■■■□□ 2.26
CHMP6-201ENST00000325167 KANK4Q5T7N3 995 aaPredicted RBP29.17■■■□□ 2.26
CHMP6-201ENST00000325167 CASKIN1Q8WXD9 1431 aa29.16■■■□□ 2.26
CHMP6-201ENST00000325167 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
CHMP6-201ENST00000325167 FHOD3Q2V2M9 1422 aa29.16■■■□□ 2.26
CHMP6-201ENST00000325167 PCF11O94913 1555 aaKnown RBP29.13■■■□□ 2.25
CHMP6-201ENST00000325167 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
CHMP6-201ENST00000325167 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
CHMP6-201ENST00000325167 CFAP43Q8NDM7 1665 aa29.13■■■□□ 2.25
CHMP6-201ENST00000325167 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
CHMP6-201ENST00000325167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
CHMP6-201ENST00000325167 LRRC9Q6ZRR7 1453 aa29.09■■■□□ 2.25
CHMP6-201ENST00000325167 P3H3Q8IVL6 736 aa29.07■■■□□ 2.24
CHMP6-201ENST00000325167 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
CHMP6-201ENST00000325167 HNRNPUL2Q1KMD3 747 aaKnown RBP29■■■□□ 2.23
CHMP6-201ENST00000325167 CCNB3Q8WWL7 1395 aa28.99■■■□□ 2.23
CHMP6-201ENST00000325167 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
CHMP6-201ENST00000325167 KIAA0586Q9BVV6 1533 aa28.96■■■□□ 2.23
CHMP6-201ENST00000325167 UGGT2Q9NYU1 1516 aa28.96■■■□□ 2.23
CHMP6-201ENST00000325167 ATP1B4Q9UN42 357 aaPredicted RBP28.89■■■□□ 2.22
CHMP6-201ENST00000325167 CEP170Q5SW79 1584 aa28.88■■■□□ 2.21
CHMP6-201ENST00000325167 CCDC18Q5T9S5 1454 aa28.86■■■□□ 2.21
CHMP6-201ENST00000325167 NUP160Q12769 1436 aa28.84■■■□□ 2.21
CHMP6-201ENST00000325167 HECW1Q76N89 1606 aa28.81■■■□□ 2.2
CHMP6-201ENST00000325167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.8■■■□□ 2.2
CHMP6-201ENST00000325167 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
CHMP6-201ENST00000325167 MTUS2Q5JR59 1369 aa28.78■■■□□ 2.2
CHMP6-201ENST00000325167 ERCC6L2Q5T890 1561 aa28.77■■■□□ 2.2
CHMP6-201ENST00000325167 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
CHMP6-201ENST00000325167 EHBP1L1Q8N3D4 1523 aa28.75■■■□□ 2.19
CHMP6-201ENST00000325167 KIAA0556O60303 1618 aa28.75■■■□□ 2.19
CHMP6-201ENST00000325167 DISP1Q96F81 1524 aa28.7■■■□□ 2.19
CHMP6-201ENST00000325167 LRRIQ1Q96JM4 1722 aa28.69■■■□□ 2.18
CHMP6-201ENST00000325167 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
CHMP6-201ENST00000325167 TRHP20396 242 aaPredicted RBP28.68■■■□□ 2.18
CHMP6-201ENST00000325167 SUPT6HQ7KZ85 1726 aaKnown RBP28.67■■■□□ 2.18
CHMP6-201ENST00000325167 EPRSP07814 1512 aaKnown RBP28.64■■■□□ 2.18
CHMP6-201ENST00000325167 CARMIL2Q6F5E8 1435 aa28.63■■■□□ 2.17
CHMP6-201ENST00000325167 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
CHMP6-201ENST00000325167 NCOA2Q15596 1464 aa28.61■■■□□ 2.17
CHMP6-201ENST00000325167 FAM50AQ14320 339 aaKnown RBP28.58■■■□□ 2.17
CHMP6-201ENST00000325167 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
CHMP6-201ENST00000325167 PRG4Q92954 1404 aaPredicted RBP28.57■■■□□ 2.16
CHMP6-201ENST00000325167 DHX57Q6P158 1386 aaKnown RBP28.57■■■□□ 2.16
CHMP6-201ENST00000325167 JPH4Q96JJ6 628 aa28.56■■■□□ 2.16
CHMP6-201ENST00000325167 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
CHMP6-201ENST00000325167 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
CHMP6-201ENST00000325167 ITGAEP38570 1179 aa28.52■■■□□ 2.16
CHMP6-201ENST00000325167 MAGI3Q5TCQ9 1506 aa28.49■■■□□ 2.15
CHMP6-201ENST00000325167 CDK11AQ9UQ88 783 aaPredicted RBP28.48■■■□□ 2.15
CHMP6-201ENST00000325167 RAB3GAP2Q9H2M9 1393 aa28.47■■■□□ 2.15
CHMP6-201ENST00000325167 CDK13Q14004 1512 aaKnown RBP28.46■■■□□ 2.15
CHMP6-201ENST00000325167 NUP153P49790 1475 aaKnown RBP28.46■■■□□ 2.15
CHMP6-201ENST00000325167 MIA2Q96PC5 1412 aa28.43■■■□□ 2.14
CHMP6-201ENST00000325167 TCOF1Q13428 1488 aaKnown RBP28.41■■■□□ 2.14
CHMP6-201ENST00000325167 PTPN23Q9H3S7 1636 aa28.4■■■□□ 2.14
CHMP6-201ENST00000325167 PLB1Q6P1J6 1458 aa28.31■■■□□ 2.12
CHMP6-201ENST00000325167 HFM1A2PYH4 1435 aa28.31■■■□□ 2.12
CHMP6-201ENST00000325167 TROQ12816 1431 aaPredicted RBP28.31■■■□□ 2.12
CHMP6-201ENST00000325167 ABCA8O94911 1581 aa28.3■■■□□ 2.12
CHMP6-201ENST00000325167 AKNAQ7Z591 1439 aa28.25■■■□□ 2.11
CHMP6-201ENST00000325167 ADCY10Q96PN6 1610 aa28.23■■■□□ 2.11
CHMP6-201ENST00000325167 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
CHMP6-201ENST00000325167 ACIN1Q9UKV3 1341 aaKnown RBP28.21■■■□□ 2.11
CHMP6-201ENST00000325167 ARID3CA6NKF2 412 aa28.21■■■□□ 2.11
CHMP6-201ENST00000325167 PTPRGP23470 1445 aa28.2■■■□□ 2.11
CHMP6-201ENST00000325167 PTPRKQ15262 1439 aa28.2■■■□□ 2.11
CHMP6-201ENST00000325167 MAPKBP1O60336 1514 aa28.19■■■□□ 2.1
CHMP6-201ENST00000325167 ITSN2Q9NZM3 1697 aa28.17■■■□□ 2.1
CHMP6-201ENST00000325167 NAIPQ13075 1403 aa28.16■■■□□ 2.1
CHMP6-201ENST00000325167 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
CHMP6-201ENST00000325167 UACAQ9BZF9 1416 aa28.13■■■□□ 2.09
CHMP6-201ENST00000325167 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
CHMP6-201ENST00000325167 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
CHMP6-201ENST00000325167 TIMELESSQ9UNS1 1208 aa28.12■■■□□ 2.09
CHMP6-201ENST00000325167 ATP10BO94823 1461 aa28.12■■■□□ 2.09
CHMP6-201ENST00000325167 GCC2Q8IWJ2 1684 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms