RNA–Protein interactions for RNA: ENST00000324866.11

LRTOMT-203, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-203ENST00000324866 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
LRTOMT-203ENST00000324866 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
LRTOMT-203ENST00000324866 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
LRTOMT-203ENST00000324866 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
LRTOMT-203ENST00000324866 ERCC6Q03468 1493 aa13.63□□□□□ -0.23
LRTOMT-203ENST00000324866 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
LRTOMT-203ENST00000324866 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
LRTOMT-203ENST00000324866 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
LRTOMT-203ENST00000324866 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
LRTOMT-203ENST00000324866 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
LRTOMT-203ENST00000324866 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
LRTOMT-203ENST00000324866 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
LRTOMT-203ENST00000324866 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
LRTOMT-203ENST00000324866 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
LRTOMT-203ENST00000324866 WDR62O43379 1518 aa13.57□□□□□ -0.24
LRTOMT-203ENST00000324866 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
LRTOMT-203ENST00000324866 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
LRTOMT-203ENST00000324866 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
LRTOMT-203ENST00000324866 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
LRTOMT-203ENST00000324866 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
LRTOMT-203ENST00000324866 FHOD3Q2V2M9 1422 aa13.53□□□□□ -0.24
LRTOMT-203ENST00000324866 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
LRTOMT-203ENST00000324866 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
LRTOMT-203ENST00000324866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.5□□□□□ -0.25
LRTOMT-203ENST00000324866 DHX57Q6P158 1386 aaKnown RBP13.48□□□□□ -0.25
LRTOMT-203ENST00000324866 IQGAP2Q13576 1575 aa13.46□□□□□ -0.25
LRTOMT-203ENST00000324866 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.26
LRTOMT-203ENST00000324866 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
LRTOMT-203ENST00000324866 UGGT2Q9NYU1 1516 aa13.43□□□□□ -0.26
LRTOMT-203ENST00000324866 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
LRTOMT-203ENST00000324866 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
LRTOMT-203ENST00000324866 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
LRTOMT-203ENST00000324866 ZNF316A6NFI3 1004 aaPredicted RBP13.4□□□□□ -0.26
LRTOMT-203ENST00000324866 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
LRTOMT-203ENST00000324866 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
LRTOMT-203ENST00000324866 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
LRTOMT-203ENST00000324866 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
LRTOMT-203ENST00000324866 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
LRTOMT-203ENST00000324866 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
LRTOMT-203ENST00000324866 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
LRTOMT-203ENST00000324866 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
LRTOMT-203ENST00000324866 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
LRTOMT-203ENST00000324866 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
LRTOMT-203ENST00000324866 DIEXFQ68CQ4 756 aaKnown RBP13.35□□□□□ -0.27
LRTOMT-203ENST00000324866 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
LRTOMT-203ENST00000324866 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
LRTOMT-203ENST00000324866 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
LRTOMT-203ENST00000324866 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
LRTOMT-203ENST00000324866 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
LRTOMT-203ENST00000324866 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
LRTOMT-203ENST00000324866 ATP1B4Q9UN42 357 aaPredicted RBP13.31□□□□□ -0.28
LRTOMT-203ENST00000324866 EPRSP07814 1512 aaKnown RBP13.31□□□□□ -0.28
LRTOMT-203ENST00000324866 DISP1Q96F81 1524 aa13.31□□□□□ -0.28
LRTOMT-203ENST00000324866 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
LRTOMT-203ENST00000324866 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
LRTOMT-203ENST00000324866 MAGI3Q5TCQ9 1506 aa13.3□□□□□ -0.28
LRTOMT-203ENST00000324866 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
LRTOMT-203ENST00000324866 PTPN23Q9H3S7 1636 aa13.27□□□□□ -0.28
LRTOMT-203ENST00000324866 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
LRTOMT-203ENST00000324866 NUP160Q12769 1436 aa13.26□□□□□ -0.29
LRTOMT-203ENST00000324866 ITGAEP38570 1179 aa13.25□□□□□ -0.29
LRTOMT-203ENST00000324866 CEP170Q5SW79 1584 aa13.25□□□□□ -0.29
LRTOMT-203ENST00000324866 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
LRTOMT-203ENST00000324866 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
LRTOMT-203ENST00000324866 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
LRTOMT-203ENST00000324866 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
LRTOMT-203ENST00000324866 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
LRTOMT-203ENST00000324866 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
LRTOMT-203ENST00000324866 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
LRTOMT-203ENST00000324866 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.3
LRTOMT-203ENST00000324866 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
LRTOMT-203ENST00000324866 NAIPQ13075 1403 aa13.19□□□□□ -0.3
LRTOMT-203ENST00000324866 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
LRTOMT-203ENST00000324866 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
LRTOMT-203ENST00000324866 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
LRTOMT-203ENST00000324866 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
LRTOMT-203ENST00000324866 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
LRTOMT-203ENST00000324866 FBLN2P98095 1184 aa13.14□□□□□ -0.31
LRTOMT-203ENST00000324866 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
LRTOMT-203ENST00000324866 DNMT1P26358 1616 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-203ENST00000324866 ABCA8O94911 1581 aa13.12□□□□□ -0.31
LRTOMT-203ENST00000324866 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
LRTOMT-203ENST00000324866 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
LRTOMT-203ENST00000324866 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
LRTOMT-203ENST00000324866 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
LRTOMT-203ENST00000324866 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
LRTOMT-203ENST00000324866 PLB1Q6P1J6 1458 aa13.08□□□□□ -0.32
LRTOMT-203ENST00000324866 DAPK1P53355 1430 aa13.07□□□□□ -0.32
LRTOMT-203ENST00000324866 MIER1Q8N108 512 aa13.07□□□□□ -0.32
LRTOMT-203ENST00000324866 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
LRTOMT-203ENST00000324866 SHROOM2Q13796 1616 aa13.05□□□□□ -0.32
LRTOMT-203ENST00000324866 ABCC5O15440 1437 aa13.05□□□□□ -0.32
LRTOMT-203ENST00000324866 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
LRTOMT-203ENST00000324866 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
LRTOMT-203ENST00000324866 ADGBQ8N7X0 1667 aa13.04□□□□□ -0.32
LRTOMT-203ENST00000324866 CHD1O14646 1710 aa13.03□□□□□ -0.32
LRTOMT-203ENST00000324866 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
LRTOMT-203ENST00000324866 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
LRTOMT-203ENST00000324866 KDM6BO15054 1643 aa13.03□□□□□ -0.32
LRTOMT-203ENST00000324866 KIF14Q15058 1648 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms