RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 CLSPNQ9HAW4 1339 aa10.75□□□□□ -0.69
SCAPER-202ENST00000324767 CNGB1Q14028 1251 aaPredicted RBP10.74□□□□□ -0.69
SCAPER-202ENST00000324767 TDRD9Q8NDG6 1382 aaKnown RBP10.74□□□□□ -0.69
SCAPER-202ENST00000324767 NEFMP07197 916 aa10.73□□□□□ -0.69
SCAPER-202ENST00000324767 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
SCAPER-202ENST00000324767 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
SCAPER-202ENST00000324767 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
SCAPER-202ENST00000324767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.7□□□□□ -0.72e-6■■■□□ 18.3
SCAPER-202ENST00000324767 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
SCAPER-202ENST00000324767 RRP7BPQ9NSQ0 103 aa10.67□□□□□ -0.7
SCAPER-202ENST00000324767 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
SCAPER-202ENST00000324767 ARHGAP35Q9NRY4 1499 aa10.66□□□□□ -0.7
SCAPER-202ENST00000324767 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
SCAPER-202ENST00000324767 CFTRP13569 1480 aa10.65□□□□□ -0.7
SCAPER-202ENST00000324767 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCAPER-202ENST00000324767 FGD5Q6ZNL6 1462 aa10.62□□□□□ -0.71
SCAPER-202ENST00000324767 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
SCAPER-202ENST00000324767 RSPH4AQ5TD94 716 aa10.61□□□□□ -0.71
SCAPER-202ENST00000324767 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
SCAPER-202ENST00000324767 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
SCAPER-202ENST00000324767 KANK1Q14678 1352 aa10.59□□□□□ -0.71
SCAPER-202ENST00000324767 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
SCAPER-202ENST00000324767 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
SCAPER-202ENST00000324767 CC2D2AQ9P2K1 1620 aa10.58□□□□□ -0.72
SCAPER-202ENST00000324767 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
SCAPER-202ENST00000324767 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
SCAPER-202ENST00000324767 IGF1RP08069 1367 aa10.57□□□□□ -0.72
SCAPER-202ENST00000324767 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
SCAPER-202ENST00000324767 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
SCAPER-202ENST00000324767 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
SCAPER-202ENST00000324767 PPP1R15AO75807 674 aaPredicted RBP10.54□□□□□ -0.72
SCAPER-202ENST00000324767 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
SCAPER-202ENST00000324767 FHOD3Q2V2M9 1422 aa10.53□□□□□ -0.72
SCAPER-202ENST00000324767 ANKRD30AQ9BXX3 1397 aa10.53□□□□□ -0.72
SCAPER-202ENST00000324767 MRC2Q9UBG0 1479 aa10.53□□□□□ -0.72
SCAPER-202ENST00000324767 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.72
SCAPER-202ENST00000324767 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.73
SCAPER-202ENST00000324767 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
SCAPER-202ENST00000324767 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
SCAPER-202ENST00000324767 TMC1Q8TDI8 760 aa10.51□□□□□ -0.73
SCAPER-202ENST00000324767 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
SCAPER-202ENST00000324767 ARID4BQ4LE39 1312 aaPredicted RBP10.51□□□□□ -0.73
SCAPER-202ENST00000324767 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
SCAPER-202ENST00000324767 PTPRGP23470 1445 aa10.51□□□□□ -0.73
SCAPER-202ENST00000324767 MYT1Q01538 1121 aa10.5□□□□□ -0.73
SCAPER-202ENST00000324767 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
SCAPER-202ENST00000324767 KIF21BO75037 1637 aa10.49□□□□□ -0.73
SCAPER-202ENST00000324767 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
SCAPER-202ENST00000324767 LAMC3Q9Y6N6 1575 aa10.49□□□□□ -0.73
SCAPER-202ENST00000324767 TOP2BQ02880 1626 aa10.49□□□□□ -0.73
SCAPER-202ENST00000324767 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
SCAPER-202ENST00000324767 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
SCAPER-202ENST00000324767 WDR43Q15061 677 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCAPER-202ENST00000324767 RGL3Q3MIN7 710 aa10.47□□□□□ -0.73
SCAPER-202ENST00000324767 CARD11Q9BXL7 1154 aa10.47□□□□□ -0.73
SCAPER-202ENST00000324767 TOPBP1Q92547 1522 aa10.46□□□□□ -0.73
SCAPER-202ENST00000324767 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.73
SCAPER-202ENST00000324767 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
SCAPER-202ENST00000324767 PLPPR3Q6T4P5 718 aa10.44□□□□□ -0.74
SCAPER-202ENST00000324767 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
SCAPER-202ENST00000324767 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.44□□□□□ -0.74
SCAPER-202ENST00000324767 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
SCAPER-202ENST00000324767 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
SCAPER-202ENST00000324767 EFCAB5A4FU69 1503 aa10.42□□□□□ -0.74
SCAPER-202ENST00000324767 CUX1P39880 1505 aa10.42□□□□□ -0.74
SCAPER-202ENST00000324767 RAB3GAP2Q9H2M9 1393 aa10.41□□□□□ -0.74
SCAPER-202ENST00000324767 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
SCAPER-202ENST00000324767 CFAP53Q96M91 514 aa10.41□□□□□ -0.74
SCAPER-202ENST00000324767 POLA1P09884 1462 aaPredicted RBP10.41□□□□□ -0.74
SCAPER-202ENST00000324767 SPAG9O60271 1321 aaKnown RBP10.41□□□□□ -0.74
SCAPER-202ENST00000324767 AQRO60306 1485 aaKnown RBP eCLIP10.41□□□□□ -0.74
SCAPER-202ENST00000324767 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
SCAPER-202ENST00000324767 PRXQ9BXM0 1461 aa10.4□□□□□ -0.74
SCAPER-202ENST00000324767 NESP48681 1621 aa10.4□□□□□ -0.74
SCAPER-202ENST00000324767 NUP155O75694 1391 aa10.4□□□□□ -0.74
SCAPER-202ENST00000324767 PKD2Q13563 968 aa10.4□□□□□ -0.75
SCAPER-202ENST00000324767 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
SCAPER-202ENST00000324767 CASKIN1Q8WXD9 1431 aa10.39□□□□□ -0.75
SCAPER-202ENST00000324767 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
SCAPER-202ENST00000324767 MPHOSPH9Q99550 1183 aa10.39□□□□□ -0.75
SCAPER-202ENST00000324767 TMF1P82094 1093 aa10.38□□□□□ -0.75
SCAPER-202ENST00000324767 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
SCAPER-202ENST00000324767 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
SCAPER-202ENST00000324767 POGKQ9P215 609 aa10.37□□□□□ -0.75
SCAPER-202ENST00000324767 MYOM3Q5VTT5 1437 aa10.37□□□□□ -0.75
SCAPER-202ENST00000324767 DCAF11Q8TEB1 546 aa10.37□□□□□ -0.75
SCAPER-202ENST00000324767 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
SCAPER-202ENST00000324767 GGT6Q6P531 493 aa10.36□□□□□ -0.75
SCAPER-202ENST00000324767 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
SCAPER-202ENST00000324767 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.75
SCAPER-202ENST00000324767 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.75
SCAPER-202ENST00000324767 KIF3BO15066 747 aa10.33□□□□□ -0.76
SCAPER-202ENST00000324767 SYNJ2O15056 1496 aa10.33□□□□□ -0.76
SCAPER-202ENST00000324767 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
SCAPER-202ENST00000324767 MIER1Q8N108 512 aa10.32□□□□□ -0.76
SCAPER-202ENST00000324767 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
SCAPER-202ENST00000324767 LRRC9Q6ZRR7 1453 aa10.32□□□□□ -0.76
SCAPER-202ENST00000324767 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
SCAPER-202ENST00000324767 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
SCAPER-202ENST00000324767 FGD6Q6ZV73 1430 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms