RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.8
PSEN1-201ENST00000324501 TNIKQ9UKE5 1360 aa10.02□□□□□ -0.81
PSEN1-201ENST00000324501 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
PSEN1-201ENST00000324501 TOP2AP11388 1531 aaKnown RBP10.01□□□□□ -0.81
PSEN1-201ENST00000324501 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
PSEN1-201ENST00000324501 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
PSEN1-201ENST00000324501 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
PSEN1-201ENST00000324501 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-201ENST00000324501 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
PSEN1-201ENST00000324501 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-201ENST00000324501 RGL3Q3MIN7 710 aa9.98□□□□□ -0.81
PSEN1-201ENST00000324501 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
PSEN1-201ENST00000324501 SMARCA4P51532 1647 aa9.98□□□□□ -0.81
PSEN1-201ENST00000324501 NEFMP07197 916 aa9.96□□□□□ -0.82
PSEN1-201ENST00000324501 TRHP20396 242 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-201ENST00000324501 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
PSEN1-201ENST00000324501 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
PSEN1-201ENST00000324501 MYT1Q01538 1121 aa9.94□□□□□ -0.82
PSEN1-201ENST00000324501 ZBTB7CA1YPR0 619 aa9.93□□□□□ -0.82
PSEN1-201ENST00000324501 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
PSEN1-201ENST00000324501 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-201ENST00000324501 CARMIL2Q6F5E8 1435 aa9.91□□□□□ -0.82
PSEN1-201ENST00000324501 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
PSEN1-201ENST00000324501 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.82
PSEN1-201ENST00000324501 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.82
PSEN1-201ENST00000324501 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-201ENST00000324501 CCNB3Q8WWL7 1395 aa9.89□□□□□ -0.83
PSEN1-201ENST00000324501 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-201ENST00000324501 MLECQ14165 292 aa9.88□□□□□ -0.83
PSEN1-201ENST00000324501 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
PSEN1-201ENST00000324501 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
PSEN1-201ENST00000324501 RUSC2Q8N2Y8 1516 aa9.86□□□□□ -0.83
PSEN1-201ENST00000324501 MIER1Q8N108 512 aa9.86□□□□□ -0.83
PSEN1-201ENST00000324501 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
PSEN1-201ENST00000324501 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
PSEN1-201ENST00000324501 FHAD1B1AJZ9 1412 aa9.85□□□□□ -0.83
PSEN1-201ENST00000324501 FKBP8Q14318 412 aa9.84□□□□□ -0.83
PSEN1-201ENST00000324501 EIF4G2P78344 907 aaKnown RBP eCLIP9.84□□□□□ -0.83
PSEN1-201ENST00000324501 FOXD1Q16676 465 aa9.83□□□□□ -0.84
PSEN1-201ENST00000324501 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
PSEN1-201ENST00000324501 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
PSEN1-201ENST00000324501 WDR43Q15061 677 aaKnown RBP eCLIP9.82□□□□□ -0.84
PSEN1-201ENST00000324501 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
PSEN1-201ENST00000324501 A0A0G2JS52 829 aa9.82□□□□□ -0.84
PSEN1-201ENST00000324501 IRX6P78412 446 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-201ENST00000324501 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
PSEN1-201ENST00000324501 CARD11Q9BXL7 1154 aa9.8□□□□□ -0.84
PSEN1-201ENST00000324501 ARHGAP35Q9NRY4 1499 aa9.8□□□□□ -0.84
PSEN1-201ENST00000324501 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
PSEN1-201ENST00000324501 VPS8Q8N3P4 1428 aa9.79□□□□□ -0.84
PSEN1-201ENST00000324501 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
PSEN1-201ENST00000324501 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
PSEN1-201ENST00000324501 GGT6Q6P531 493 aa9.77□□□□□ -0.84
PSEN1-201ENST00000324501 PPM1GO15355 546 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-201ENST00000324501 AEBP2Q6ZN18 517 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-201ENST00000324501 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-201ENST00000324501 DCAF11Q8TEB1 546 aa9.76□□□□□ -0.85
PSEN1-201ENST00000324501 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
PSEN1-201ENST00000324501 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
PSEN1-201ENST00000324501 SAFB2Q14151 953 aaKnown RBP eCLIP9.74□□□□□ -0.85
PSEN1-201ENST00000324501 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
PSEN1-201ENST00000324501 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
PSEN1-201ENST00000324501 POGKQ9P215 609 aa9.73□□□□□ -0.85
PSEN1-201ENST00000324501 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
PSEN1-201ENST00000324501 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
PSEN1-201ENST00000324501 FMN1Q68DA7 1419 aa9.72□□□□□ -0.85
PSEN1-201ENST00000324501 SETD5Q9C0A6 1442 aa9.72□□□□□ -0.85
PSEN1-201ENST00000324501 KANK1Q14678 1352 aa9.72□□□□□ -0.85
PSEN1-201ENST00000324501 PKD2Q13563 968 aa9.72□□□□□ -0.85
PSEN1-201ENST00000324501 NESP48681 1621 aa9.71□□□□□ -0.85
PSEN1-201ENST00000324501 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-201ENST00000324501 NUTM2DQ5VT03 806 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-201ENST00000324501 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
PSEN1-201ENST00000324501 STK26Q9P289 416 aa9.7□□□□□ -0.86
PSEN1-201ENST00000324501 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
PSEN1-201ENST00000324501 AQRO60306 1485 aaKnown RBP eCLIP9.7□□□□□ -0.86
PSEN1-201ENST00000324501 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
PSEN1-201ENST00000324501 RAB3GAP2Q9H2M9 1393 aa9.68□□□□□ -0.86
PSEN1-201ENST00000324501 SOX12O15370 315 aa9.68□□□□□ -0.86
PSEN1-201ENST00000324501 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
PSEN1-201ENST00000324501 GAPVD1Q14C86 1478 aa9.67□□□□□ -0.86
PSEN1-201ENST00000324501 MPHOSPH9Q99550 1183 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
PSEN1-201ENST00000324501 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 EFCAB2Q5VUJ9 269 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 NUP155O75694 1391 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 CCDC136Q96JN2 1154 aa9.66□□□□□ -0.86
PSEN1-201ENST00000324501 KIF3BO15066 747 aa9.65□□□□□ -0.86
PSEN1-201ENST00000324501 HSPA5P11021 654 aaKnown RBP9.64□□□□□ -0.87
PSEN1-201ENST00000324501 ANP32AP39687 249 aaKnown RBP9.64□□□□□ -0.87
PSEN1-201ENST00000324501 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
PSEN1-201ENST00000324501 IGF1RP08069 1367 aa9.63□□□□□ -0.87
PSEN1-201ENST00000324501 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
PSEN1-201ENST00000324501 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
PSEN1-201ENST00000324501 ARXQ96QS3 562 aa9.63□□□□□ -0.87
PSEN1-201ENST00000324501 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-201ENST00000324501 ANKRD30AQ9BXX3 1397 aa9.62□□□□□ -0.87
PSEN1-201ENST00000324501 CFAP53Q96M91 514 aa9.62□□□□□ -0.87
PSEN1-201ENST00000324501 IFT140Q96RY7 1462 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms