RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
LTBP3-202ENST00000322147 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
LTBP3-202ENST00000322147 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
LTBP3-202ENST00000322147 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
LTBP3-202ENST00000322147 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
LTBP3-202ENST00000322147 RGL3Q3MIN7 710 aa25.2■■□□□ 1.63
LTBP3-202ENST00000322147 KCNH8Q96L42 1107 aa25.2■■□□□ 1.62
LTBP3-202ENST00000322147 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
LTBP3-202ENST00000322147 TMC1Q8TDI8 760 aa25.15■■□□□ 1.62
LTBP3-202ENST00000322147 PLPPR3Q6T4P5 718 aa25.11■■□□□ 1.61
LTBP3-202ENST00000322147 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
LTBP3-202ENST00000322147 RBM19Q9Y4C8 960 aaKnown RBP25.11■■□□□ 1.61
LTBP3-202ENST00000322147 FOXD1Q16676 465 aa25.1■■□□□ 1.61
LTBP3-202ENST00000322147 TSPY4P0CV99 314 aa25.09■■□□□ 1.61
LTBP3-202ENST00000322147 TSPY10P0CW01 314 aa25.09■■□□□ 1.61
LTBP3-202ENST00000322147 EIF4G2P78344 907 aaKnown RBP eCLIP25.09■■□□□ 1.61
LTBP3-202ENST00000322147 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
LTBP3-202ENST00000322147 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
LTBP3-202ENST00000322147 CCNB3Q8WWL7 1395 aa25.03■■□□□ 1.6
LTBP3-202ENST00000322147 CUX2O14529 1486 aa25.01■■□□□ 1.59
LTBP3-202ENST00000322147 SLC24A1O60721 1099 aa25■■□□□ 1.59
LTBP3-202ENST00000322147 CARMIL1Q5VZK9 1371 aa24.99■■□□□ 1.59
LTBP3-202ENST00000322147 CCDC136Q96JN2 1154 aa24.99■■□□□ 1.59
LTBP3-202ENST00000322147 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
LTBP3-202ENST00000322147 NBR1Q14596 966 aa24.96■■□□□ 1.59
LTBP3-202ENST00000322147 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
LTBP3-202ENST00000322147 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
LTBP3-202ENST00000322147 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
LTBP3-202ENST00000322147 ANP32AP39687 249 aaKnown RBP24.88■■□□□ 1.57
LTBP3-202ENST00000322147 RAPGEF2Q9Y4G8 1499 aa24.87■■□□□ 1.57
LTBP3-202ENST00000322147 PLEKHD1A6NEE1 506 aa24.87■■□□□ 1.57
LTBP3-202ENST00000322147 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
LTBP3-202ENST00000322147 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
LTBP3-202ENST00000322147 CARD11Q9BXL7 1154 aa24.77■■□□□ 1.56
LTBP3-202ENST00000322147 B4GALNT3Q6L9W6 998 aa24.76■■□□□ 1.55
LTBP3-202ENST00000322147 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
LTBP3-202ENST00000322147 PLEKHG5O94827 1062 aa24.7■■□□□ 1.54
LTBP3-202ENST00000322147 KIF21BO75037 1637 aa24.69■■□□□ 1.54
LTBP3-202ENST00000322147 HSPA5P11021 654 aaKnown RBP24.68■■□□□ 1.54
LTBP3-202ENST00000322147 NPM1P06748 294 aaKnown RBP eCLIP24.67■■□□□ 1.54
LTBP3-202ENST00000322147 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
LTBP3-202ENST00000322147 WDR43Q15061 677 aaKnown RBP eCLIP24.67■■□□□ 1.54
LTBP3-202ENST00000322147 ARXQ96QS3 562 aa24.67■■□□□ 1.54
LTBP3-202ENST00000322147 NEUROD2Q15784 382 aa24.66■■□□□ 1.54
LTBP3-202ENST00000322147 DCAF11Q8TEB1 546 aa24.66■■□□□ 1.54
LTBP3-202ENST00000322147 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
LTBP3-202ENST00000322147 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.53
LTBP3-202ENST00000322147 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.53
LTBP3-202ENST00000322147 FHOD3Q2V2M9 1422 aa24.63■■□□□ 1.53
LTBP3-202ENST00000322147 MSH5O43196 834 aa24.62■■□□□ 1.53
LTBP3-202ENST00000322147 CCER2I3L3R5 266 aa24.61■■□□□ 1.53
LTBP3-202ENST00000322147 NEFMP07197 916 aa24.59■■□□□ 1.53
LTBP3-202ENST00000322147 PPP1R15AO75807 674 aaPredicted RBP24.58■■□□□ 1.53
LTBP3-202ENST00000322147 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.53
LTBP3-202ENST00000322147 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
LTBP3-202ENST00000322147 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
LTBP3-202ENST00000322147 PKD2Q13563 968 aa24.55■■□□□ 1.52
LTBP3-202ENST00000322147 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
LTBP3-202ENST00000322147 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
LTBP3-202ENST00000322147 MPHOSPH9Q99550 1183 aa24.51■■□□□ 1.51
LTBP3-202ENST00000322147 ESF1Q9H501 851 aaKnown RBP24.51■■□□□ 1.51
LTBP3-202ENST00000322147 DEKP35659 375 aaKnown RBP24.51■■□□□ 1.51
LTBP3-202ENST00000322147 FANCIQ9NVI1 1328 aa24.49■■□□□ 1.51
LTBP3-202ENST00000322147 PPM1GO15355 546 aaPredicted RBP24.46■■□□□ 1.51
LTBP3-202ENST00000322147 RRBP1Q9P2E9 1410 aaKnown RBP24.45■■□□□ 1.51
LTBP3-202ENST00000322147 ARHGAP35Q9NRY4 1499 aa24.43■■□□□ 1.5
LTBP3-202ENST00000322147 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
LTBP3-202ENST00000322147 SAFB2Q14151 953 aaKnown RBP eCLIP24.41■■□□□ 1.5
LTBP3-202ENST00000322147 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
LTBP3-202ENST00000322147 ARAP1Q96P48 1450 aa24.39■■□□□ 1.5
LTBP3-202ENST00000322147 PPP4R2Q9NY27 417 aa24.39■■□□□ 1.5
LTBP3-202ENST00000322147 RGS3P49796 1198 aa24.39■■□□□ 1.49
LTBP3-202ENST00000322147 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
LTBP3-202ENST00000322147 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
LTBP3-202ENST00000322147 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
LTBP3-202ENST00000322147 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
LTBP3-202ENST00000322147 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
LTBP3-202ENST00000322147 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
LTBP3-202ENST00000322147 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
LTBP3-202ENST00000322147 EIF5BO60841 1220 aaKnown RBP24.32■■□□□ 1.48
LTBP3-202ENST00000322147 HSP90AA1P07900 732 aaKnown RBP24.32■■□□□ 1.48
LTBP3-202ENST00000322147 FRAT1Q92837 279 aaPredicted RBP24.31■■□□□ 1.48
LTBP3-202ENST00000322147 NOP58Q9Y2X3 529 aaKnown RBP24.31■■□□□ 1.48
LTBP3-202ENST00000322147 IGF1RP08069 1367 aa24.29■■□□□ 1.48
LTBP3-202ENST00000322147 ZNF644Q9H582 1327 aaPredicted RBP24.28■■□□□ 1.48
LTBP3-202ENST00000322147 NUP155O75694 1391 aa24.28■■□□□ 1.48
LTBP3-202ENST00000322147 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
LTBP3-202ENST00000322147 GGT6Q6P531 493 aa24.24■■□□□ 1.47
LTBP3-202ENST00000322147 ZBTB7CA1YPR0 619 aa24.23■■□□□ 1.47
LTBP3-202ENST00000322147 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
LTBP3-202ENST00000322147 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
LTBP3-202ENST00000322147 MAPKBP1O60336 1514 aa24.21■■□□□ 1.47
LTBP3-202ENST00000322147 MLECQ14165 292 aa24.2■■□□□ 1.46
LTBP3-202ENST00000322147 PHLDB1Q86UU1 1377 aa24.19■■□□□ 1.46
LTBP3-202ENST00000322147 NUTM2DQ5VT03 806 aaPredicted RBP24.19■■□□□ 1.46
LTBP3-202ENST00000322147 FMN1Q68DA7 1419 aa24.19■■□□□ 1.46
LTBP3-202ENST00000322147 ERICH6BQ5W0A0 696 aa24.18■■□□□ 1.46
LTBP3-202ENST00000322147 SOX12O15370 315 aa24.17■■□□□ 1.46
LTBP3-202ENST00000322147 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
LTBP3-202ENST00000322147 U2SURPO15042 1029 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms