RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
YBX1-201ENST00000321358 LOC105371045A0A1W2PR82 267 aa34.29■■■■□ 3.08
YBX1-201ENST00000321358 KIAA0586Q9BVV6 1533 aa34.27■■■■□ 3.08
YBX1-201ENST00000321358 JPH4Q96JJ6 628 aa34.17■■■■□ 3.06
YBX1-201ENST00000321358 TNIKQ9UKE5 1360 aa34.15■■■■□ 3.06
YBX1-201ENST00000321358 CLASP1Q7Z460 1538 aa34.15■■■■□ 3.06
YBX1-201ENST00000321358 IQGAP2Q13576 1575 aa34.13■■■■□ 3.05
YBX1-201ENST00000321358 RANGAP1P46060 587 aaPredicted RBP34.09■■■■□ 3.05
YBX1-201ENST00000321358 CTTNBP2Q8WZ74 1663 aa34.08■■■■□ 3.05
YBX1-201ENST00000321358 RIMBP3CA6NJZ7 1639 aa34.07■■■■□ 3.04
YBX1-201ENST00000321358 RIMBP3BA6NNM3 1639 aa34.07■■■■□ 3.04
YBX1-201ENST00000321358 RIMBP3Q9UFD9 1639 aa34.07■■■■□ 3.04
YBX1-201ENST00000321358 ARHGEF11O15085 1522 aa34.06■■■■□ 3.04
YBX1-201ENST00000321358 PRG4Q92954 1404 aaPredicted RBP33.98■■■■□ 3.03
YBX1-201ENST00000321358 CARMIL2Q6F5E8 1435 aa33.97■■■■□ 3.03
YBX1-201ENST00000321358 UGGT2Q9NYU1 1516 aa33.96■■■■□ 3.03
YBX1-201ENST00000321358 SHROOM2Q13796 1616 aa33.92■■■■□ 3.02
YBX1-201ENST00000321358 CLIP1P30622 1438 aa33.86■■■■□ 3.01
YBX1-201ENST00000321358 P3H3Q8IVL6 736 aa33.86■■■■□ 3.01
YBX1-201ENST00000321358 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
YBX1-201ENST00000321358 DISP1Q96F81 1524 aa33.82■■■■□ 3.01
YBX1-201ENST00000321358 EFCAB5A4FU69 1503 aa33.81■■■■□ 3
YBX1-201ENST00000321358 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
YBX1-201ENST00000321358 TTBK1Q5TCY1 1321 aaPredicted RBP33.76■■■□□ 2.99
YBX1-201ENST00000321358 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
YBX1-201ENST00000321358 KIAA0556O60303 1618 aa33.76■■■□□ 2.99
YBX1-201ENST00000321358 ARHGAP35Q9NRY4 1499 aa33.74■■■□□ 2.99
YBX1-201ENST00000321358 SAMD9Q5K651 1589 aa33.74■■■□□ 2.99
YBX1-201ENST00000321358 ERCC6L2Q5T890 1561 aa33.74■■■□□ 2.99
YBX1-201ENST00000321358 PTPRGP23470 1445 aa33.72■■■□□ 2.99
YBX1-201ENST00000321358 FHOD3Q2V2M9 1422 aa33.69■■■□□ 2.98
YBX1-201ENST00000321358 FMN1Q68DA7 1419 aa33.59■■■□□ 2.97
YBX1-201ENST00000321358 UACAQ9BZF9 1416 aa33.47■■■□□ 2.95
YBX1-201ENST00000321358 ATP1B4Q9UN42 357 aaPredicted RBP33.46■■■□□ 2.95
YBX1-201ENST00000321358 PLB1Q6P1J6 1458 aa33.43■■■□□ 2.94
YBX1-201ENST00000321358 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
YBX1-201ENST00000321358 NPM1P06748 294 aaKnown RBP eCLIP33.36■■■□□ 2.93
YBX1-201ENST00000321358 CASKIN1Q8WXD9 1431 aa33.35■■■□□ 2.93
YBX1-201ENST00000321358 ABCA8O94911 1581 aa33.34■■■□□ 2.93
YBX1-201ENST00000321358 UHRF1BP1LA0JNW5 1464 aa33.34■■■□□ 2.93
YBX1-201ENST00000321358 ABCC2Q92887 1545 aa33.33■■■□□ 2.93
YBX1-201ENST00000321358 RAPGEF6Q8TEU7 1601 aa33.31■■■□□ 2.92
YBX1-201ENST00000321358 FYCO1Q9BQS8 1478 aa33.29■■■□□ 2.92
YBX1-201ENST00000321358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.28■■■□□ 2.92
YBX1-201ENST00000321358 HNRNPUL2Q1KMD3 747 aaKnown RBP33.28■■■□□ 2.92
YBX1-201ENST00000321358 ARID3CA6NKF2 412 aa33.28■■■□□ 2.92
YBX1-201ENST00000321358 APLP2Q06481 763 aa33.25■■■□□ 2.91
YBX1-201ENST00000321358 HECW1Q76N89 1606 aa33.24■■■□□ 2.91
YBX1-201ENST00000321358 PCF11O94913 1555 aaKnown RBP33.24■■■□□ 2.91
YBX1-201ENST00000321358 NUP153P49790 1475 aaKnown RBP33.24■■■□□ 2.91
YBX1-201ENST00000321358 ADCY10Q96PN6 1610 aa33.23■■■□□ 2.91
YBX1-201ENST00000321358 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
YBX1-201ENST00000321358 CDK11AQ9UQ88 783 aaPredicted RBP33.17■■■□□ 2.9
YBX1-201ENST00000321358 KDM5BQ9UGL1 1544 aa33.16■■■□□ 2.9
YBX1-201ENST00000321358 ATP10BO94823 1461 aa33.16■■■□□ 2.9
YBX1-201ENST00000321358 EPRSP07814 1512 aaKnown RBP33.15■■■□□ 2.9
YBX1-201ENST00000321358 CCDC18Q5T9S5 1454 aa33.14■■■□□ 2.9
YBX1-201ENST00000321358 PLEKHD1A6NEE1 506 aa33.1■■■□□ 2.89
YBX1-201ENST00000321358 CDK13Q14004 1512 aaKnown RBP33.06■■■□□ 2.88
YBX1-201ENST00000321358 ZCCHC11Q5TAX3 1644 aaKnown RBP33.03■■■□□ 2.88
YBX1-201ENST00000321358 ASXL2Q76L83 1435 aa32.98■■■□□ 2.87
YBX1-201ENST00000321358 MAP3K1Q13233 1512 aa32.98■■■□□ 2.87
YBX1-201ENST00000321358 MTUS2Q5JR59 1369 aa32.96■■■□□ 2.87
YBX1-201ENST00000321358 MAPKBP1O60336 1514 aa32.93■■■□□ 2.86
YBX1-201ENST00000321358 TIAM1Q13009 1591 aa32.93■■■□□ 2.86
YBX1-201ENST00000321358 KCNH8Q96L42 1107 aa32.92■■■□□ 2.86
YBX1-201ENST00000321358 WDR7Q9Y4E6 1490 aa32.91■■■□□ 2.86
YBX1-201ENST00000321358 LRRIQ1Q96JM4 1722 aa32.9■■■□□ 2.86
YBX1-201ENST00000321358 TROQ12816 1431 aaPredicted RBP32.88■■■□□ 2.85
YBX1-201ENST00000321358 KANK4Q5T7N3 995 aaPredicted RBP32.87■■■□□ 2.85
YBX1-201ENST00000321358 LRRC9Q6ZRR7 1453 aa32.85■■■□□ 2.85
YBX1-201ENST00000321358 CFAP43Q8NDM7 1665 aa32.85■■■□□ 2.85
YBX1-201ENST00000321358 EHBP1L1Q8N3D4 1523 aa32.79■■■□□ 2.84
YBX1-201ENST00000321358 MAGI3Q5TCQ9 1506 aa32.78■■■□□ 2.84
YBX1-201ENST00000321358 FAM69CQ0P6D2 419 aa32.77■■■□□ 2.84
YBX1-201ENST00000321358 PPARGC1BQ86YN6 1023 aaKnown RBP32.77■■■□□ 2.84
YBX1-201ENST00000321358 ABCC10Q5T3U5 1492 aa32.74■■■□□ 2.83
YBX1-201ENST00000321358 KIF14Q15058 1648 aa32.7■■■□□ 2.83
YBX1-201ENST00000321358 CCNB3Q8WWL7 1395 aa32.64■■■□□ 2.82
YBX1-201ENST00000321358 KIF13AQ9H1H9 1805 aa32.63■■■□□ 2.81
YBX1-201ENST00000321358 NCOA2Q15596 1464 aa32.63■■■□□ 2.81
YBX1-201ENST00000321358 SUPT6HQ7KZ85 1726 aaKnown RBP32.62■■■□□ 2.81
YBX1-201ENST00000321358 DIP2BQ9P265 1576 aa32.62■■■□□ 2.81
YBX1-201ENST00000321358 GLI2P10070 1586 aa32.6■■■□□ 2.81
YBX1-201ENST00000321358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.6■■■□□ 2.81
YBX1-201ENST00000321358 CD109Q6YHK3 1445 aa32.59■■■□□ 2.81
YBX1-201ENST00000321358 ABCA9Q8IUA7 1624 aa32.55■■■□□ 2.8
YBX1-201ENST00000321358 CFDP1Q9UEE9 299 aaPredicted RBP32.52■■■□□ 2.8
YBX1-201ENST00000321358 TTC37Q6PGP7 1564 aa32.51■■■□□ 2.8
YBX1-201ENST00000321358 PLCH2O75038 1416 aa32.5■■■□□ 2.79
YBX1-201ENST00000321358 GPATCH8Q9UKJ3 1502 aaKnown RBP32.49■■■□□ 2.79
YBX1-201ENST00000321358 PHLDB1Q86UU1 1377 aa32.48■■■□□ 2.79
YBX1-201ENST00000321358 EFCAB2Q5VUJ9 269 aa32.48■■■□□ 2.79
YBX1-201ENST00000321358 MYOM3Q5VTT5 1437 aa32.47■■■□□ 2.79
YBX1-201ENST00000321358 ZNF777Q9ULD5 760 aaPredicted RBP32.43■■■□□ 2.78
YBX1-201ENST00000321358 MAP3K4Q9Y6R4 1608 aa32.43■■■□□ 2.78
YBX1-201ENST00000321358 ARHGAP5Q13017 1502 aa32.41■■■□□ 2.78
YBX1-201ENST00000321358 TEX14Q8IWB6 1497 aa32.4■■■□□ 2.78
YBX1-201ENST00000321358 ARAP3Q8WWN8 1544 aa32.39■■■□□ 2.78
YBX1-201ENST00000321358 MIA2Q96PC5 1412 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms